Octadecabacter sp. SW4: FTO60_15945
Help
Entry
FTO60_15945 CDS
T06209
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oct03009
]
FTO60_15945
Enzymes [BR:
oct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FTO60_15945
Ribosome biogenesis [BR:
oct03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FTO60_15945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_31
zf-C3HC4_3
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QEE37074
LinkDB
All DBs
Position
complement(3214224..3215417)
Genome browser
AA seq
397 aa
AA seq
DB search
MLIESLTHQGLGRTADGQFVPRTLPGEELGLRDDGSVQILTPSSDRVAPPCRHFKTCGGC
AMQHAADPFVAHWKAGIVTRALAAHGIDIDIRGIHTSPPHARRRAKFAGKRTKNGAIVGF
HTRASDTVIAVPDCQLLLPSLREAIPALEELTVLSASRKAEIALTVTDSKAGLDVWVESD
KPLDGPLRITLAEFAQRHGFARLAWGDEPVVTINAPSQRFGRADVIPPAGAFLQATREGE
MQLLAAAVDATKGADRIVDLFSGCGTFALPLAETAMVTAVESSAPMLNALDQGWRRAQGL
KRVKTETRDLFRRPLEPDELRYFDAAVIDPPRAGAQAQTATLARSTIPRIAMISCNPVTF
ARDAKVLVDAGFVIDWIDVVDQFRWSAHVEVAAAFTR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgaatcactaacccatcaggggcttggccgcactgcggatgggcagttcgtt
ccgcgcacgctgcccggcgaggaattaggactgcgagatgatggcagcgtgcaaattctg
acgccgtcatctgatcgcgttgcgccaccctgtcggcatttcaaaacctgcggtggttgc
gcgatgcagcatgcagctgacccgtttgtcgcacattggaaggctggcatcgtaacccgt
gcattggctgcccacggtatcgacattgatattcgtggtattcacacttcgccgccgcac
gcgcgccgccgcgcaaagttcgcgggcaaacgcaccaagaatggtgccattgtcggattt
catacgcgcgcgtccgatacggtgattgccgtgccagattgccagctgctcttgcccagc
ctgcgtgaggccattcccgcgctcgaggaattgacggtgctgagtgcgtcgcgcaaggcc
gagatcgcgctgactgtgaccgacagcaaggcgggcctggatgtctgggttgaatctgac
aagccgctggatggtccgttgcggatcactttggccgagtttgctcaacgccacggattt
gcccggctggcatggggggacgaaccggtcgtgacgatcaacgcaccctcgcagcggttc
gggcgcgccgatgtgatacctccggccggtgcgtttctgcaagccacccgtgaaggcgaa
atgcaacttctggccgccgctgttgatgcgaccaaaggcgcggaccggatcgtcgatttg
ttttccggttgcggcacatttgcgttgcccctggccgaaacagcgatggtgacagccgtg
gaaagcagcgcacccatgttgaacgcgcttgatcaggggtggcgcagggcgcaggggctc
aagcgggtcaaaaccgaaacgcgcgacctgtttcgccgcccgcttgaaccagatgaattg
cgctattttgatgcggcggtgatcgacccgccccgcgccggtgcgcaggcgcagaccgcc
acgctggcccggtcaacaatcccgcgcatcgcgatgatttcctgcaatccggttactttt
gcccgcgatgccaaggttttggttgatgcggggttcgtgattgactggattgatgtcgtg
gatcagtttcgctggtcggcgcatgtcgaggtcgcggcggcgttcacccggtaa
DBGET
integrated database retrieval system
