Octadecabacter sp. SW4: FTO60_15960
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Entry
FTO60_15960 CDS
T06209
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
oct
Octadecabacter sp. SW4
Pathway
oct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTO60_15960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oct03019
]
FTO60_15960
Enzymes [BR:
oct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FTO60_15960
Messenger RNA biogenesis [BR:
oct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FTO60_15960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEE37077
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All DBs
Position
complement(3219180..3220331)
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AA seq
383 aa
AA seq
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MTRITADWLNSDAARTVCGVLTDAGYQAWYVGGCVRNALLGAPVADLDLSTDALPEDVMR
LAGAAGLRAIPTGIAHGTVTIVAGNTPFEVTTFRKDIDTDGRRATVAFADNITDDAHRRD
FTMNALYADPDGVVADPLGGLVDLKARHVRFIDDPEARIKEDYLRILRFFRFHAWYGDPN
GGLDADGLAACAANGDGLGQLSRERVGSEIRKLLGAPDPAPAVAAMETAGVLMRVLPGAN
AASLAVLVHIEGQVGLAPDPIRRLALIGGEDVAMRLRLSKREAADLAVLRDGLGNGLPAE
VLGYRHGGQALDVLALRAAMGGLELDPNLVAHARFGAEQVLPVSARDFMPDLQGAALGKA
VKDAEERWIASGFTLTRDTLLGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattactgctgattggctgaacagcgatgctgcccgcacagtttgcggggtg
ctgacggatgcggggtatcaagcgtggtatgttggcggctgtgtgcgcaacgcgcttttg
ggcgcgccggttgcggatctggatctgtccaccgatgccttgcccgaagatgtgatgcgc
cttgcaggtgccgccggattgcgtgccattccaactggaattgcgcatggaacagtcact
attgttgcgggaaataccccttttgaggtcacgaccttccgcaaggatatcgacacggac
gggcggcgcgccacggtggcctttgccgataacatcaccgatgacgcgcatcgtcgcgat
tttacgatgaacgcactctatgctgatcctgacggtgtcgttgctgatccgttgggcggt
ctggttgatctgaaagcgcgccacgtccgattcatcgatgatcccgaggcgcggatcaaa
gaggattatctgcgtattctgcggtttttccgatttcacgcgtggtatggcgaccccaat
ggcgggctggatgccgacggattggctgcatgtgccgccaatggcgatggtcttggccaa
ctgtcgcgcgaacgtgtcggaagcgagattcgaaaactgcttggtgcccctgatcccgcg
cccgctgttgccgcgatggaaaccgccggtgtgctgatgcgtgtgttgccaggggcgaac
gcggcatcgctggccgttcttgtgcatatcgaagggcaggtaggtcttgcacccgatcct
atccgtcgtctggccctgattggcggcgaagacgttgcaatgcggttgcgtctgtcaaag
cgtgaagctgccgatctagcggtgttgcgtgacgggcttgggaatggattgcctgccgag
gtgctgggctatcggcatggcgggcaggcgcttgacgttctggcgctgcgcgccgcgatg
ggtggtctggaactggacccaaatctggtcgctcacgccagatttggtgcggaacaggtc
ttgcccgtctcagcccgcgatttcatgcctgacttgcaaggcgccgcgttgggcaaagcg
gtaaaagatgccgaggagcgctggatcgcctcgggcttcacgctgactcgcgacacattg
cttggtagatag
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