Octadecabacter sp. SW4: FTO60_16140
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Entry
FTO60_16140 CDS
T06209
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oct03400
]
FTO60_16140 (addB)
Enzymes [BR:
oct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FTO60_16140 (addB)
DNA repair and recombination proteins [BR:
oct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FTO60_16140 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QEE37111
UniProt:
A0A5B9ETL6
LinkDB
All DBs
Position
complement(3256732..3259680)
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AA seq
982 aa
AA seq
DB search
MIFKTAKTPRVFGLPPGVDFARALVDGLLDRGGALPPQDFAKIEVYVNTRRMQRRLVSMF
DTGPARLLPRIRLVTDLALDPLAADLPPPIAPLRRRLELSVLVSDLLERQPDLAPRTALF
DLSDSLAALMDEMQGEGVSPEKIAGLDVSDQSGHWARALQFVDIVQRYFDVSQEPPDQEA
RQRYVIERMIARWQETPPQHPIIVAGSTGSRGATALFMQAVAGLPQGAVVLPGYDFEMPD
AVWDRFEDALTSEDHPQFRFVRLLRDLALTHRNVQSWHGPAKGNPRNALVSLALRPAPVT
DQWQSEGADLKDLTEATKDVTLVVASSPRAEAEAIALRLRQAVDDGITAALITPDRMLTR
QVAAALERWDITPDDSAGLPLPLSPPGRFLRHVADLFGERLTGEALLTLLKHPLTHSGSA
GRGAHLLRSRELELQLRRFGPPYPDADSLRAWAGHGKNPDPARMAWVEWLVIALDGIGDA
GPRSLSEHLGDHLRLAALLAAGPDAAGSGGLWDEAAGREARRICDTLVQNADAGGVLGPR
DYAKLFGAVLNTGEVRDRDKGHPQVLFWGTLEARVQSADLVILGGMNEGSWPEAAKPDPW
LNRKMRLNAGLLLPERRIGLAAHDFQQAVAGKEVWITRAQRSEEAETVPSRWVNRLTNLL
GGLHEGGGPELLARMQARGDRWLAMATQLSTPDQRTAPALRPSPRPPVSARPKGLSVTQI
KTLIRDPYAIYARSILGLKPLDPLTPEADAPLRGIIVHKILERFVRSGPAPDDPDARSAL
LQVARDTIDEMCPWPAYRVLWLARFTRVIDIFLTEDTARRAIATPEGFEAEGALRLTGLD
FEIKGRADRIDRCANGGVILYDYKTGAPPSQKEQGRFDLQLLLLAAMADRAAFKSIGRAR
TEAAVYIGLGSDPKCIAAPFDEHPPDKVWAEFHDLIGDWMRQPRGYTARLAHMKRTDTGD
YDHLSRFGEWGDGDGIAPEDLT
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttaagaccgcaaagacaccgcgcgtttttggcctcccgcccggagtcgatttt
gcgcgcgccctcgttgatggcctgcttgatcgtggcggcgcgctgccacctcaggatttc
gccaaaatcgaagtttacgtcaacacgcgcaggatgcagcgccgccttgtatcgatgttt
gatactggtccggcccgcctcttgccgcgcatacggctggtgaccgatctggcgcttgat
ccgctcgcggcagacttgccgccacccatcgcaccgctgcggcggcggcttgagttgtcg
gtgcttgtctctgatctgcttgaacgacagcccgaccttgccccgcgcacggctttgttt
gacctgtccgatagcctcgccgccttgatggacgaaatgcagggcgagggtgtgtcgccc
gaaaaaatcgctggtcttgatgtctcggatcaatccggccattgggcgcgggcgctgcag
ttcgtggacatcgtgcagcgctatttcgacgtttcgcaggaaccaccggatcaagaggcg
cgccagcgatatgtgattgagcgcatgattgcgcgttggcaggaaacaccgccacaacat
ccgattatcgttgccggctcgacaggatcacgcggggcgaccgccctgttcatgcaggct
gtcgctgggcttccgcagggcgcggttgttcttccagggtatgattttgaaatgcctgat
gcagtctgggatcgtttcgaagacgcgctgaccagcgaggatcatccccagttccggttc
gtgcgcctgctgcgcgatttggcactgacacatcgcaacgtgcagtcgtggcacggacct
gccaagggaaaccctcgcaatgcgttagtgtctttggcattgcggcccgcccccgtcacc
gatcaatggcaatccgagggcgcagatctgaaggatctgaccgaagccacaaaagatgtc
acgctcgtcgtcgcaagctctccacgcgccgaggccgaagcgattgcgctgcgcctgcgc
caagctgtcgatgatggcataacggcggccttgatcacgcctgaccggatgctgacacgc
caggtcgcggccgcactggaacgttgggatatcacgccggacgatagtgccggcctgccc
ttgccgcttagcccgccggggcgattcttgcgccacgttgccgatctttttggcgaacga
ttgactggcgaggccttgctgacacttctcaaacatccgctgacccattccggcagcgcc
gggcgcggtgcgcatcttttgcggtcgcgcgaactggagttgcagctgcgccgcttcggg
ccgccctatcctgatgcggacagtctgcgggcctgggctggccatggcaaaaaccccgat
ccggcgcgtatggcctgggtcgaatggttggtcatagcgcttgacggcattggcgatgcc
ggcccgcgcagtctgtcggaacaccttggcgatcatttacggctggccgcccttttggcc
gctggcccagacgccgctggatcaggcgggctctgggacgaggcggcgggccgtgaggct
aggcgcatttgcgacacccttgtccagaacgcggatgccggcggggttcttggcccccgc
gactacgcaaaactgttcggcgccgttctgaacaccggtgaagtgcgtgaccgcgacaag
ggccatccgcaggtgctgttttggggcacgctcgaggcgcgcgtgcaaagcgccgatctt
gtgatccttgggggcatgaacgaagggtcgtggcccgaagccgccaagcccgatccttgg
ctcaatcgcaaaatgcgccttaatgcagggctgctgctaccagagcgccggatcggcctt
gcagcccatgattttcagcaggccgtcgccggaaaagaggtttggattacccgcgcccag
cgctcggaggaggcggaaaccgtgccgtcccgctgggtgaatcgcttaaccaaccttctt
ggtgggctgcatgaggggggcgggcccgaactgcttgccaggatgcaggcgcgtggcgac
cgctggcttgcaatggcgacacagttaagcacaccggatcagcgcaccgcgcccgcattg
cgaccatcgccgcgcccaccggtaagtgcgcgccccaaagggctttccgtcacccagatc
aaaacgctgatccgcgatccctatgcaatttacgcgcgcagtattctgggtttgaaaccg
cttgatccattgacaccagaagctgatgcgccgctgcgcggtatcattgtgcacaaaatt
ctcgaacgctttgtgcggtctggccctgcgcccgacgatccagatgcgcgcagcgcgctg
ttgcaggttgcaagggacacgatcgatgaaatgtgcccctggcctgcctaccgggtgttg
tggctggcgcggttcacgcgggtgatcgacatctttctgacggaggataccgcacgacgc
gcaatcgccacccccgaaggtttcgaagccgagggtgcgcttcgcttaacggggctggac
tttgaaatcaaagggcgggccgaccggattgatcgttgcgcaaatggcggcgtcattctt
tacgactacaagaccggtgcgccgcccagccaaaaggaacaggggcggttcgatctgcaa
cttttgcttttggccgcaatggcggaccgcgcagcgttcaaaagtatcggcagggcacgc
accgaggctgcggtatatatcgggctgggaagcgatccgaaatgtatcgctgcaccgttt
gacgaacatccacccgataaggtctgggcggaatttcacgatctgatcggcgactggatg
cgccagccgcgtggctacacggcccgtcttgcgcatatgaaacgcacggataccggcgat
tatgatcacctgtcgcgctttggcgaatggggtgacggcgacgggatcgcacccgaggat
ttgacatga
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