Oryctolagus cuniculus (rabbit): 100008618
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Entry
100008618 CDS
T03373
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100008618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100008618
03012 Translation factors [BR:
ocu03012
]
100008618
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100008618
Translation factors [BR:
ocu03012
]
Eukaryotic type
Release factors
100008618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100008618
NCBI-ProteinID:
XP_002711802
Ensembl:
ENSOCUG00000004759
UniProt:
A0A5F9CY66
LinkDB
All DBs
Position
6:complement(5306267..5338990)
Genome browser
AA seq
638 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSSSDSAPDCWDQADMEAPGPGPCGGSGGSLAAAAAAEAQRDH
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAPPPPAPAGAAGNNHGAGSVAGGPSAP
VESSQEEQSLCEGSVSAVSMELSEPVVENGETEMSPEESWEHKEEISEAEPGGGSLGDGR
PPEEGAQEMMEEEEEMPKPKSVAAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMV
DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPG
HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINK
MDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIG
LPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNV
EVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIE
HKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAG
TICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcggcggcggcggcggtggcggcggcggcggcgggagcagcagcagc
agcgactcggcgcccgactgctgggatcaggcggacatggaagcccccgggcccggcccg
tgcggcggcagcggcgggtccctggcggcggcggcggcggccgaggcccagcgtgaccac
ctcagcgcggccttcagccggcagctcaacgtcaacgccaaacctttcgtgcccaacgtc
cacgccgcggagttcgtaccgtctttcctgcggggcccggccccgccgccgccagccccg
gctggcgccgccggcaacaaccacggagcgggcagcgtcgcgggaggcccttcggcacct
gtggaatcctctcaagaggaacagtcattgtgtgaaggctccgtttcagctgttagcatg
gaactttcagaacctgttgtagagaacggagagacagaaatgtccccagaagaatcatgg
gagcacaaagaagaaataagtgaggcagagccagggggtggctccctgggagatggaagg
ccaccggaggaaggtgcccaagaaatgatggaggaggaagaggaaatgccaaagcccaaa
tctgtagctgcgcctcctggtgcccctaaaaaagaacatgtaaatgtagtgtttattggg
catgtagatgctggcaagtcaaccattggaggccaaataatgtatttgactggaatggtt
gataaaaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaaacttgg
tacttgtcttgggccctagatacaaatcaggaagaacgagacaaaggtaaaacagtcgaa
gtgggtcgtgcctactttgaaacagaaaagaagcatttcacaattctagacgcccctggc
cacaagagttttgtcccaaatatgattggtggcgcctctcaagctgatttggctgtgctg
gtcatctctgccaggaaaggagagtttgaaactggatttgaaaaaggaggacagacaaga
gaacacgcaatgttggcaaagacagcaggtgtaaagcacttaattgtgcttattaataag
atggatgacccaacagtgaattggagcaacgagagatatgaagaatgtaaagagaaacta
gtgccatttttgaaaaaagttggcttcaatcccaaaaaggacattcactttatgccctgc
tcaggactgactggagcaaatctcaaagagcaatcagatttctgtccttggtacattgga
ttaccatttattccatatctggataatttgccaaacttcaatagatcagttgatggacca
atcagactgccgattgtggataagtacaaggatatgggcactgtggtcctgggaaagctg
gaatcgggatctatttgtaaaggccagcagctagtgatgatgccgaacaagcacaacgtg
gaagttcttggaatactttctgatgatgtagaaactgattctgtagccccaggtgagaac
ctgaaaatcagactcaaaggaattgaggaagaagagattcttccaggattcatcctttgt
gatcttaataatctttgccattctggacgcacatttgatgcccagatagtgattatagag
cacaaatccatcatctgcccagggtacaatgcggtgctgcatattcatacctgtattgag
gaagtcgagataacagccttaatctgcttggtagacaaaaagtcaggagagaaaagcaag
actcggccccgttttgtgaaacaagatcaagtgtgcattgcccgtcttcggacagcagga
accatctgccttgagacctttaaggacttccctcagatgggtcgttttaccttaagagat
gagggtaagaccattgcaattggaaaagttctgaaactggttccagaaaaagactaa
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