Oryctolagus cuniculus (rabbit): 100008898
Help
Entry
100008898 CDS
T03373
Symbol
ITGB1
Name
(RefSeq) integrin subunit beta 1
KO
K05719
integrin beta 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04015
Rap1 signaling pathway
ocu04145
Phagosome
ocu04151
PI3K-Akt signaling pathway
ocu04360
Axon guidance
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04514
Cell adhesion molecules
ocu04530
Tight junction
ocu04611
Platelet activation
ocu04670
Leukocyte transendothelial migration
ocu04810
Regulation of actin cytoskeleton
ocu05100
Bacterial invasion of epithelial cells
ocu05133
Pertussis
ocu05135
Yersinia infection
ocu05140
Leishmaniasis
ocu05145
Toxoplasmosis
ocu05165
Human papillomavirus infection
ocu05200
Pathways in cancer
ocu05205
Proteoglycans in cancer
ocu05222
Small cell lung cancer
ocu05410
Hypertrophic cardiomyopathy
ocu05412
Arrhythmogenic right ventricular cardiomyopathy
ocu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100008898 (ITGB1)
04151 PI3K-Akt signaling pathway
100008898 (ITGB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100008898 (ITGB1)
04514 Cell adhesion molecules
100008898 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100008898 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100008898 (ITGB1)
04530 Tight junction
100008898 (ITGB1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100008898 (ITGB1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100008898 (ITGB1)
04670 Leukocyte transendothelial migration
100008898 (ITGB1)
09158 Development and regeneration
04360 Axon guidance
100008898 (ITGB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100008898 (ITGB1)
05205 Proteoglycans in cancer
100008898 (ITGB1)
09162 Cancer: specific types
05222 Small cell lung cancer
100008898 (ITGB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100008898 (ITGB1)
09171 Infectious disease: bacterial
05135 Yersinia infection
100008898 (ITGB1)
05133 Pertussis
100008898 (ITGB1)
05100 Bacterial invasion of epithelial cells
100008898 (ITGB1)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100008898 (ITGB1)
05140 Leishmaniasis
100008898 (ITGB1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100008898 (ITGB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100008898 (ITGB1)
05414 Dilated cardiomyopathy
100008898 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100008898 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100008898 (ITGB1)
04515 Cell adhesion molecules [BR:
ocu04515
]
100008898 (ITGB1)
04090 CD molecules [BR:
ocu04090
]
100008898 (ITGB1)
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100008898 (ITGB1)
Exosome [BR:
ocu04147
]
Exosomal proteins
Proteins found in most exosomes
100008898 (ITGB1)
Cell adhesion molecules [BR:
ocu04515
]
Integrins
Integrin beta subunits
100008898 (ITGB1)
CD molecules [BR:
ocu04090
]
Proteins
100008898 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_2
Motif
Other DBs
NCBI-GeneID:
100008898
NCBI-ProteinID:
XP_002721235
Ensembl:
ENSOCUG00000003623
UniProt:
A0A5F9C3C4
LinkDB
All DBs
Position
Un
Genome browser
AA seq
798 aa
AA seq
DB search
MNLQLIFWIGLLGSICCVFGQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
SARCDDLEALKKKGCHPDDIENPRGSRDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLV
LQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRVTSDF
RIGFGSFVEKTVMPYISTTPAKLKNPCTSEQNCTSPFSYKNVLSLTDRGEEFNELVGKQR
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
CHLEHNEYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISI
GDEVHFEISITSNQCPVKHSETIKIKPLGFTEEVEVVLEFICKCECQDTGIPRSPQCHDG
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTSCM
ATNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDK
CAQECSHFNITKVENRDKLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEAIVHVVET
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaactgattttctggattggactgctcggttcaatttgctgtgtgtttggc
caaacagatgaaaatagatgtttaaaagcaaatgctaaatcgtgtggagaatgcatccag
gcaggccccaattgtgggtggtgcacaaattcgacgtttttgcaagaaggaatgcctact
tctgcacgatgtgatgacttagaagccttgaaaaagaaaggctgccatccagacgacata
gagaatcccagaggttccagagacataaagaaaaataagaatgtcaccaaccgtagcaaa
ggcacagcagagaagctgcagccggaggatatcactcagatccagccccagcagctggtt
ctgcagctgcgatcaggggagccccagacgttcacgttgaagttcaagcgtgctgaagac
taccccatcgacctctactacctcatggacctctcctactccatgaaagatgatctggag
aacgtcaagagtctcgggacggatctgatgaatgagatgaggagggtgacttcagacttc
cgaattgggtttggctcctttgtggagaaaaccgtgatgccttacattagcactacgcct
gccaagctcaagaacccttgcacgagtgagcagaactgcaccagccccttcagctacaag
aacgtgctcagcctcacagacagaggggaggagttcaacgagctcgtcgggaagcagcgc
atttctggaaatttggattctccggaaggtggttttgatgcaatcatgcaggttgcggtc
tgtgggtcgctgatcggctggaggaacgtcactcggctgctggtgttctccacggacgcg
gggttccactttgctggggacgggaaacttggtggtattgtcttacccaacgatggacag
tgccacctggaacacaacgagtacaccatgagccactattacgactacccttctattgcc
cacctcgtccagaaactcagtgaaaataacattcagactatttttgcagttactgaagaa
tttcagcctgtttacaaggaactgaaaaacttgatccctaagtcagcagtgggaacgttg
tctgcaaactccagcaatgtcatccagctgatcattgatgcctacaactccctttcttca
gaagtcattttggaaaacagcaaattgccagaaggagtaacgataaattacaaatcttac
tgcaagaacggggtgaatggcacaggggagaacggaaggaagtgctccaatatctccatt
ggagatgaggttcactttgaaatcagcataacttcaaatcagtgtccagttaagcattct
gaaaccattaaaatcaagcctctgggcttcaccgaggaggtggaggtggtccttgagttc
atctgcaagtgtgagtgccaggacacaggcatcccaagaagtccccagtgccacgatggg
aatggcacgtttgagtgtggggcttgcaggtgcaacgagggacgtgtaggcagacactgt
gaatgcagtacagatgaggtgaacagtgaagacatggatgcttactgcaggaaagaaaac
agttcagaaatctgcagcaacaacggggagtgcgtctgtgggcagtgtgtgtgcaggaag
agggacaacacaaatgaaatctattctggcaaattctgcgagtgtgataatttcaactgt
gatcgctccaatggcttaatttgtggaggaaatggtgtttgcaagtgtcgtgtgtgtgag
tgcaatcctaactacaccggcagtgcgtgcgactgttctctggatacgacgtcttgcatg
gccacaaacgggcagatctgtaatggccggggtatctgcgagtgtggcgtctgcaagtgt
acagatcccaagtttcaagggcaaacctgtgagatgtgccagacctgcctgggtgtctgt
gcggagcacaaagaatgtgtccagtgccgagccttcaataaaggagaaaagaaagacaaa
tgtgcacaggaatgctcacatttcaacatcaccaaggtggaaaatcgggacaagctgccc
cagccaggccaggtggaccccctgtcccactgtaaggagaaggatgtggacgactgctgg
ttctacttcacgtactcggtgaacgggaacaacgaggccatcgtgcacgtcgtggagact
ccagagtgccccactggtcctgacatcattccaattgtcgctggtgtggtggctggcatt
gttcttattggccttgcactgctgctgatttggaagctcttgatgatcattcatgacaga
agggaatttgctaaatttgaaaaggagaaaatgaatgccaaatgggacacgggtgaaaat
cctatttataagagtgctgtgacaactgtggtcaaccccaagtatgagggaaaatga
Oryctolagus cuniculus (rabbit): 100346103
Help
Entry
100346103 CDS
T03373
Symbol
ITGA4
Name
(RefSeq) integrin subunit alpha 4
KO
K06483
integrin alpha 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04514
Cell adhesion molecules
ocu04640
Hematopoietic cell lineage
ocu04670
Leukocyte transendothelial migration
ocu04672
Intestinal immune network for IgA production
ocu04810
Regulation of actin cytoskeleton
ocu05135
Yersinia infection
ocu05140
Leishmaniasis
ocu05165
Human papillomavirus infection
ocu05410
Hypertrophic cardiomyopathy
ocu05412
Arrhythmogenic right ventricular cardiomyopathy
ocu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100346103 (ITGA4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100346103 (ITGA4)
04514 Cell adhesion molecules
100346103 (ITGA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100346103 (ITGA4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100346103 (ITGA4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100346103 (ITGA4)
04670 Leukocyte transendothelial migration
100346103 (ITGA4)
04672 Intestinal immune network for IgA production
100346103 (ITGA4)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100346103 (ITGA4)
09171 Infectious disease: bacterial
05135 Yersinia infection
100346103 (ITGA4)
09174 Infectious disease: parasitic
05140 Leishmaniasis
100346103 (ITGA4)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100346103 (ITGA4)
05412 Arrhythmogenic right ventricular cardiomyopathy
100346103 (ITGA4)
05414 Dilated cardiomyopathy
100346103 (ITGA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100346103 (ITGA4)
04515 Cell adhesion molecules [BR:
ocu04515
]
100346103 (ITGA4)
04090 CD molecules [BR:
ocu04090
]
100346103 (ITGA4)
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100346103 (ITGA4)
Exosomal proteins of other cancer cells
100346103 (ITGA4)
Cell adhesion molecules [BR:
ocu04515
]
Integrins
Integrin alpha subunits
100346103 (ITGA4)
CD molecules [BR:
ocu04090
]
Proteins
100346103 (ITGA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_alpha2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
100346103
NCBI-ProteinID:
XP_002712273
Ensembl:
ENSOCUG00000003008
UniProt:
G1TY34
Structure
PDB
LinkDB
All DBs
Position
7:121433522..121544431
Genome browser
AA seq
1031 aa
AA seq
DB search
MAGEARRGSGSRGAAVREAVMLLLCLGIPTGRPYNLDTESALLYQGPPGTLFGYSVALHS
HGSNRWLIVGAPTANWLANASVVSPGAIYRCRIGQNPGQTCEQLQLGSPTGEPCGKTCLE
ERDNEWLGVTLSRQPGENGSIVTCGHRWKNIFYIKNENKLPIGVCYGMPSDLRTELSKRM
APCYQDYIRKFGENFASCQAGISSFYTEDLIVMGAPGSFYWTGSLFVYNITTNKYKAFWD
KDNQVKFGSYLGYSVGAGHFWSRHTTEVVGGAPQHEQIGKAYIFSIDARELNILYEMKGK
KLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNEMETELIG
SDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLRGAIYIYNGRADGISPTFSQRIEG
LQVSKSLSMFGQSISGQIDADNNGYVDVAVGAFRSNSAVLLRTRPVVIVDASLRHPEAVN
RTKFDCIENGLPSVCIDLKLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPSRFYFSSNGT
SDVITGSIQVSSKATNCRTHQAFMRKDVRDILTPVQIEAAYRLGQHVLTKRSAEEFPPLQ
PILQQKKEKDVIKKMINFARFCAHENCTADLQVSAKIGFLKPHENKTYLAVGGMKMLMLN
VSLFNAGDDAYGTTLHIRLPMGLYFIKILDLEEKQINCEVTESSGPVKLDCSVGYIYVDH
LSRIDISFLLDVSSLSRAEEDVNITVHATCENEGEMDTLKHNKVTLAIPLRYEVMLTAHG
FVNPTSFVYGSSEENDHETCMTEKMNLTFHVINTGNSMAPNVSMEIMVPNSFMPQTNKLF
NILDVQMTTGECFFETYQRECALEQPKGAMETLKGIFTFLSKTDKRLLYCIKADPHCLNV
LCNFGKMESGKEASVHIQLEGRPSILEMDETSSLKFEIRATAFPEPHPKVVELNKEENVA
HVLLEGLHHQRPKRHFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENRRD
SWSYVKSNNDN
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctggggaagcgaggcgtggatctggctcccgaggggccgccgtccgggaggcggtg
atgctgttgctgtgcctggggatcccgaccgggcgcccctacaacctcgacaccgagagc
gcgctgctctaccagggccccccgggcacgctgttcggctactctgtcgcgctgcacagc
cacgggtcgaatcgatggctcatagtgggggcgcccactgccaactggctcgccaacgct
tcagtggtcagtcctggggcgatttacagatgcaggatcggacagaatccgggccagacg
tgcgaacagctccagctgggtagccctactggagaaccttgtgggaagacttgtctggag
gagagagataatgagtggctgggcgtcactctttccagacagccaggagaaaacggatcc
atcgtgacttgtgggcatcgatggaaaaatatattttacataaagaatgagaataagctc
cccattggtgtttgctatggaatgccctctgatttacgaacagaactgagtaaaagaatg
gctccatgctatcaagattatataagaaaatttggagaaaactttgcatcatgtcaagct
ggaatatctagtttttacacagaggatttaattgtaatgggagcacctggatcattttat
tggactggttctctttttgtctacaatataactacaaataaatacaaggctttttgggac
aaagataatcaagtaaaatttggaagttatttagggtactcagttggagctggtcacttc
tggagtcgacatacaacagaagtagttggaggagctcctcaacatgaacagattggaaaa
gcatatatattcagcattgacgccagagaactaaatatcttatatgaaatgaaaggtaaa
aagctcggctcatattttggagcctctgtgtgtgctgtggacctcaatgcggatggcttc
tcagacctactcgtaggagctcctatgcagagcaccatcagggaggaaggaagagtgttc
gtgtacatcaactcgggctcgggagcagtaatgaatgaaatggaaacagaactcattgga
agtgacaaatatgctgcaagatttggggaatctatagttaatcttggtgacattgacaat
gatggctttgaagatgttgctattggagctccacaggaagatgacttgagaggtgctatc
tacatttacaatggccgagcagacggaatctcgccaaccttctcacagagaattgaaggg
cttcaagtcagcaaatcattaagtatgtttggacagtcgatatcaggacaaattgatgca
gataacaacggatatgtagatgtagcagttggtgcttttcgctctaattctgctgtgttg
ctaaggaccagacctgtagtgattgttgatgcttctttaagacacccagaggcagtaaat
agaacaaaatttgattgcattgaaaatggactgccttctgtgtgcattgatctaaaactt
tgcttctcatataaaggcaaagaggttccaggctatattgttttgttttataacatgagt
ttggatgtgaacagaaaggcagagtccccatcaagattttatttttcttccaatggcact
tctgatgtgattacaggaagcatacaagtatcgagcaaagctactaactgtaggacgcat
caagcatttatgcggaaagatgtgagggacatccttactccagttcagattgaagccgct
taccgcctggggcagcatgtcctcactaaacgaagtgcagaagaattcccaccactgcag
ccaattcttcagcagaagaaagaaaaagacgtgataaaaaaaatgataaactttgcaagg
ttttgtgctcatgaaaattgtactgctgatttacaggtttctgcaaaaattgggtttttg
aagccacatgaaaataaaacctaccttgctgttggaggcatgaagatgttaatgttgaat
gtgtcattgttcaatgctggagatgatgcttacggaacaactctgcacatcagactgccc
atggggctgtacttcattaagattttagacctggaagagaaacaaataaactgtgaagta
acagaaagctctggcccagtaaaacttgactgcagtgttggttatatctatgtagatcat
ctctcaaggatagatatcagcttcctcctggatgtgagttcactcagcagagcggaggag
gatgtcaacatcacagtgcacgccacatgtgaaaacgaaggggaaatggacactttgaag
cataacaaagtgactttagcaatacctctaaggtatgaggttatgctaactgctcatggg
tttgtcaacccaacttcctttgtgtatggatcaagtgaggaaaatgaccatgaaacatgc
atgacagagaaaatgaatctcacattccatgttattaacactggcaatagcatggctcca
aatgtaagcatggaaataatggtaccaaattcttttatgccccaaaccaataaactgttc
aacattttggatgtccagatgaccactggagaatgcttctttgaaacttatcaaagagaa
tgtgcattagagcagccaaagggtgccatggagaccttgaaaggcatattcacgttcttg
tcaaagactgataagaggctgttgtattgcataaaagctgacccacactgtttaaatgtg
ttatgtaattttgggaaaatggaaagtggaaaagaagccagtgttcacattcagctggaa
ggccggccgtccattttagaaatggatgagacatcgtcactcaagtttgaaataagggcg
acagcttttccagagccgcatccaaaagttgttgaattaaacaaggaagagaatgttgca
catgttttgctagaaggactacatcatcaaagacccaaacgtcattttactatagtgatt
atttctagcagtttgctacttggacttatagtacttctattgatttcatatgtcatgtgg
aaggctggcttctttaaaagacagtacaaatcaatcctacaagaagaaaatagaagagac
agttggagttatgtcaaaagcaataatgacaattaa
DBGET
integrated database retrieval system
