Oryctolagus cuniculus (rabbit): 100008898 Help Entry 100008898         CDS       T03373                                  Name (RefSeq) integrin beta-1 isoform X2   KO K05719   integrin beta 1 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03271   Virion - Rotavirus ocu04015   Rap1 signaling pathway ocu04145   Phagosome ocu04151   PI3K-Akt signaling pathway ocu04360   Axon guidance ocu04510   Focal adhesion ocu04512   ECM-receptor interaction ocu04514   Cell adhesion molecules ocu04530   Tight junction ocu04611   Platelet activation ocu04670   Leukocyte transendothelial migration ocu04810   Regulation of actin cytoskeleton ocu04820   Cytoskeleton in muscle cells ocu05100   Bacterial invasion of epithelial cells ocu05133   Pertussis ocu05135   Yersinia infection ocu05140   Leishmaniasis ocu05145   Toxoplasmosis ocu05165   Human papillomavirus infection ocu05200   Pathways in cancer ocu05205   Proteoglycans in cancer ocu05222   Small cell lung cancer ocu05410   Hypertrophic cardiomyopathy ocu05412   Arrhythmogenic right ventricular cardiomyopathy ocu05414   Dilated cardiomyopathy Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03271 Virion - Rotavirus     100008898  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     100008898    04151 PI3K-Akt signaling pathway     100008898   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100008898    04514 Cell adhesion molecules     100008898  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100008898   09144 Cellular community - eukaryotes    04510 Focal adhesion     100008898    04530 Tight junction     100008898   09142 Cell motility    04820 Cytoskeleton in muscle cells     100008898    04810 Regulation of actin cytoskeleton     100008898  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     100008898    04670 Leukocyte transendothelial migration     100008898   09158 Development and regeneration    04360 Axon guidance     100008898  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100008898    05205 Proteoglycans in cancer     100008898   09162 Cancer: specific types    05222 Small cell lung cancer     100008898   09172 Infectious disease: viral    05165 Human papillomavirus infection     100008898   09171 Infectious disease: bacterial    05135 Yersinia infection     100008898    05133 Pertussis     100008898    05100 Bacterial invasion of epithelial cells     100008898   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100008898    05140 Leishmaniasis     100008898   09166 Cardiovascular disease    05410 Hypertrophic cardiomyopathy     100008898    05412 Arrhythmogenic right ventricular cardiomyopathy     100008898    05414 Dilated cardiomyopathy     100008898  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100008898   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ocu04147]     100008898    04515 Cell adhesion molecules [BR:ocu04515]     100008898    04090 CD molecules [BR:ocu04090]     100008898 Membrane trafficking [BR:ocu04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     100008898 Exosome [BR:ocu04147]  Exosomal proteins   Proteins found in most exosomes    100008898 Cell adhesion molecules [BR:ocu04515]  Integrins   Integrin beta subunits    100008898 CD molecules [BR:ocu04090]  Proteins   100008898 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin Motif Other DBs NCBI-GeneID:  100008898 NCBI-ProteinID:  XP_002721235 Ensembl:  ENSOCUG00000003623 UniProt:  A0A5F9C3C4 LinkDB All DBs Position Unknown AA seq 798 aa AA seqDB search MNLQLIFWIGLLGSICCVFGQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT SARCDDLEALKKKGCHPDDIENPRGSRDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLV LQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRVTSDF RIGFGSFVEKTVMPYISTTPAKLKNPCTSEQNCTSPFSYKNVLSLTDRGEEFNELVGKQR ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ CHLEHNEYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISI GDEVHFEISITSNQCPVKHSETIKIKPLGFTEEVEVVLEFICKCECQDTGIPRSPQCHDG NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTSCM ATNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDK CAQECSHFNITKVENRDKLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEAIVHVVET PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN PIYKSAVTTVVNPKYEGK NT seq 2397 nt NT seq  +upstreamnt  +downstreamnt atgaatttacaactgattttctggattggactgctcggttcaatttgctgtgtgtttggc caaacagatgaaaatagatgtttaaaagcaaatgctaaatcgtgtggagaatgcatccag gcaggccccaattgtgggtggtgcacaaattcgacgtttttgcaagaaggaatgcctact tctgcacgatgtgatgacttagaagccttgaaaaagaaaggctgccatccagacgacata gagaatcccagaggttccagagacataaagaaaaataagaatgtcaccaaccgtagcaaa ggcacagcagagaagctgcagccggaggatatcactcagatccagccccagcagctggtt ctgcagctgcgatcaggggagccccagacgttcacgttgaagttcaagcgtgctgaagac taccccatcgacctctactacctcatggacctctcctactccatgaaagatgatctggag aacgtcaagagtctcgggacggatctgatgaatgagatgaggagggtgacttcagacttc cgaattgggtttggctcctttgtggagaaaaccgtgatgccttacattagcactacgcct gccaagctcaagaacccttgcacgagtgagcagaactgcaccagccccttcagctacaag aacgtgctcagcctcacagacagaggggaggagttcaacgagctcgtcgggaagcagcgc atttctggaaatttggattctccggaaggtggttttgatgcaatcatgcaggttgcggtc tgtgggtcgctgatcggctggaggaacgtcactcggctgctggtgttctccacggacgcg gggttccactttgctggggacgggaaacttggtggtattgtcttacccaacgatggacag tgccacctggaacacaacgagtacaccatgagccactattacgactacccttctattgcc cacctcgtccagaaactcagtgaaaataacattcagactatttttgcagttactgaagaa tttcagcctgtttacaaggaactgaaaaacttgatccctaagtcagcagtgggaacgttg tctgcaaactccagcaatgtcatccagctgatcattgatgcctacaactccctttcttca gaagtcattttggaaaacagcaaattgccagaaggagtaacgataaattacaaatcttac tgcaagaacggggtgaatggcacaggggagaacggaaggaagtgctccaatatctccatt ggagatgaggttcactttgaaatcagcataacttcaaatcagtgtccagttaagcattct gaaaccattaaaatcaagcctctgggcttcaccgaggaggtggaggtggtccttgagttc atctgcaagtgtgagtgccaggacacaggcatcccaagaagtccccagtgccacgatggg aatggcacgtttgagtgtggggcttgcaggtgcaacgagggacgtgtaggcagacactgt gaatgcagtacagatgaggtgaacagtgaagacatggatgcttactgcaggaaagaaaac agttcagaaatctgcagcaacaacggggagtgcgtctgtgggcagtgtgtgtgcaggaag agggacaacacaaatgaaatctattctggcaaattctgcgagtgtgataatttcaactgt gatcgctccaatggcttaatttgtggaggaaatggtgtttgcaagtgtcgtgtgtgtgag tgcaatcctaactacaccggcagtgcgtgcgactgttctctggatacgacgtcttgcatg gccacaaacgggcagatctgtaatggccggggtatctgcgagtgtggcgtctgcaagtgt acagatcccaagtttcaagggcaaacctgtgagatgtgccagacctgcctgggtgtctgt gcggagcacaaagaatgtgtccagtgccgagccttcaataaaggagaaaagaaagacaaa tgtgcacaggaatgctcacatttcaacatcaccaaggtggaaaatcgggacaagctgccc cagccaggccaggtggaccccctgtcccactgtaaggagaaggatgtggacgactgctgg ttctacttcacgtactcggtgaacgggaacaacgaggccatcgtgcacgtcgtggagact ccagagtgccccactggtcctgacatcattccaattgtcgctggtgtggtggctggcatt gttcttattggccttgcactgctgctgatttggaagctcttgatgatcattcatgacaga agggaatttgctaaatttgaaaaggagaaaatgaatgccaaatgggacacgggtgaaaat cctatttataagagtgctgtgacaactgtggtcaaccccaagtatgagggaaaatga

Oryctolagus cuniculus (rabbit): 100346103 Help Entry 100346103         CDS       T03373                                  Name (RefSeq) integrin alpha-4 isoform X1   KO K06483   integrin alpha 4 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04151   PI3K-Akt signaling pathway ocu04510   Focal adhesion ocu04512   ECM-receptor interaction ocu04514   Cell adhesion molecules ocu04640   Hematopoietic cell lineage ocu04670   Leukocyte transendothelial migration ocu04672   Intestinal immune network for IgA production ocu04810   Regulation of actin cytoskeleton ocu04820   Cytoskeleton in muscle cells ocu05135   Yersinia infection ocu05140   Leishmaniasis ocu05165   Human papillomavirus infection ocu05410   Hypertrophic cardiomyopathy ocu05412   Arrhythmogenic right ventricular cardiomyopathy ocu05414   Dilated cardiomyopathy Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100346103   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100346103    04514 Cell adhesion molecules     100346103  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100346103   09142 Cell motility    04820 Cytoskeleton in muscle cells     100346103    04810 Regulation of actin cytoskeleton     100346103  09150 Organismal Systems   09151 Immune system    04640 Hematopoietic cell lineage     100346103    04670 Leukocyte transendothelial migration     100346103    04672 Intestinal immune network for IgA production     100346103  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     100346103   09171 Infectious disease: bacterial    05135 Yersinia infection     100346103   09174 Infectious disease: parasitic    05140 Leishmaniasis     100346103   09166 Cardiovascular disease    05410 Hypertrophic cardiomyopathy     100346103    05412 Arrhythmogenic right ventricular cardiomyopathy     100346103    05414 Dilated cardiomyopathy     100346103  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ocu04147]     100346103    04515 Cell adhesion molecules [BR:ocu04515]     100346103    04090 CD molecules [BR:ocu04090]     100346103 Exosome [BR:ocu04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    100346103   Exosomal proteins of other cancer cells    100346103 Cell adhesion molecules [BR:ocu04515]  Integrins   Integrin alpha subunits    100346103 CD molecules [BR:ocu04090]  Proteins   100346103 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha CATSPERG_C Motif Other DBs NCBI-GeneID:  100346103 NCBI-ProteinID:  XP_002712273 Ensembl:  ENSOCUG00000003008 UniProt:  G1TY34 Structure PDBPDBj LinkDB All DBs Position 7:complement(52042856..52153857) Genome browser AA seq 1031 aa AA seqDB search MAGEARRGSGSRGAAVREAVMLLLCLGIPTGRPYNLDTESALLYQGPPGTLFGYSVALHS HGSNRWLIVGAPTANWLANASVVSPGAIYRCRIGQNPGQTCEQLQLGSPTGEPCGKTCLE ERDNEWLGVTLSRQPGENGSIVTCGHRWKNIFYIKNENKLPIGVCYGMPSDLRTELSKRM APCYQDYIRKFGENFASCQAGISSFYTEDLIVMGAPGSFYWTGSLFVYNITTNKYKAFWD KDNQVKFGSYLGYSVGAGHFWSRHTTEVVGGAPQHEQIGKAYIFSIDARELNILYEMKGK KLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNEMETELIG SDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLRGAIYIYNGRADGISPTFSQRIEG LQVSKSLSMFGQSISGQIDADNNGYVDVAVGAFRSNSAVLLRTRPVVIVDASLRHPEAVN RTKFDCIENGLPSVCIDLKLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPSRFYFSSNGT SDVITGSIQVSSKATNCRTHQAFMRKDVRDILTPVQIEAAYRLGQHVLTKRSAEEFPPLQ PILQQKKEKDVIKKMINFARFCAHENCTADLQVSAKIGFLKPHENKTYLAVGGMKMLMLN VSLFNAGDDAYGTTLHIRLPMGLYFIKILDLEEKQINCEVTESSGPVKLDCSVGYIYVDH LSRIDISFLLDVSSLSRAEEDVNITVHATCENEGEMDTLKHNKVTLAIPLRYEVMLTAHG FVNPTSFVYGSSEENDHETCMTEKMNLTFHVINTGNSMAPNVSMEIMVPNSFMPQTNKLF NILDVQMTTGECFFETYQRECALEQPKGAMETLKGIFTFLSKTDKRLLYCIKADPHCLNV LCNFGKMESGKEASVHIQLEGRPSILEMDETSSLKFEIRATAFPEPHPKVVELNKEENVA HVLLEGLHHQRPKRHFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENRRD SWSYVKSNNDN NT seq 3096 nt NT seq  +upstreamnt  +downstreamnt atggctggggaagcgaggcgtggatctggctcccgaggggccgccgtccgggaggcggtg atgctgttgctgtgcctggggatcccgaccgggcgcccctacaacctcgacaccgagagc gcgctgctctaccagggccccccgggcacgctgttcggctactctgtcgcgctgcacagc cacgggtcgaatcgatggctcatagtgggggcgcccactgccaactggctcgccaacgct tcagtggtcagtcctggggcgatttacagatgcaggatcggacagaatccgggccagacg tgcgaacagctccagctgggtagccctactggagaaccttgtgggaagacttgtctggag gagagagataatgagtggctgggcgtcactctttccagacagccaggagaaaacggatcc atcgtgacttgtgggcatcgatggaaaaatatattttacataaagaatgagaataagctc cccattggtgtttgctatggaatgccctctgatttacgaacagaactgagtaaaagaatg gctccatgctatcaagattatataagaaaatttggagaaaactttgcatcatgtcaagct ggaatatctagtttttacacagaggatttaattgtaatgggagcacctggatcattttat tggactggttctctttttgtctacaatataactacaaataaatacaaggctttttgggac aaagataatcaagtaaaatttggaagttatttagggtactcagttggagctggtcacttc tggagtcgacatacaacagaagtagttggaggagctcctcaacatgaacagattggaaaa gcatatatattcagcattgacgccagagaactaaatatcttatatgaaatgaaaggtaaa aagctcggctcatattttggagcctctgtgtgtgctgtggacctcaatgcggatggcttc tcagacctactcgtaggagctcctatgcagagcaccatcagggaggaaggaagagtgttc gtgtacatcaactcgggctcgggagcagtaatgaatgaaatggaaacagaactcattgga agtgacaaatatgctgcaagatttggggaatctatagttaatcttggtgacattgacaat gatggctttgaagatgttgctattggagctccacaggaagatgacttgagaggtgctatc tacatttacaatggccgagcagacggaatctcgccaaccttctcacagagaattgaaggg cttcaagtcagcaaatcattaagtatgtttggacagtcgatatcaggacaaattgatgca gataacaacggatatgtagatgtagcagttggtgcttttcgctctaattctgctgtgttg ctaaggaccagacctgtagtgattgttgatgcttctttaagacacccagaggcagtaaat agaacaaaatttgattgcattgaaaatggactgccttctgtgtgcattgatctaaaactt tgcttctcatataaaggcaaagaggttccaggctatattgttttgttttataacatgagt ttggatgtgaacagaaaggcagagtccccatcaagattttatttttcttccaatggcact tctgatgtgattacaggaagcatacaagtatcgagcaaagctactaactgtaggacgcat caagcatttatgcggaaagatgtgagggacatccttactccagttcagattgaagccgct taccgcctggggcagcatgtcctcactaaacgaagtgcagaagaattcccaccactgcag ccaattcttcagcagaagaaagaaaaagacgtgataaaaaaaatgataaactttgcaagg ttttgtgctcatgaaaattgtactgctgatttacaggtttctgcaaaaattgggtttttg aagccacatgaaaataaaacctaccttgctgttggaggcatgaagatgttaatgttgaat gtgtcattgttcaatgctggagatgatgcttacggaacaactctgcacatcagactgccc atggggctgtacttcattaagattttagacctggaagagaaacaaataaactgtgaagta acagaaagctctggcccagtaaaacttgactgcagtgttggttatatctatgtagatcat ctctcaaggatagatatcagcttcctcctggatgtgagttcactcagcagagcggaggag gatgtcaacatcacagtgcacgccacatgtgaaaacgaaggggaaatggacactttgaag cataacaaagtgactttagcaatacctctaaggtatgaggttatgctaactgctcatggg tttgtcaacccaacttcctttgtgtatggatcaagtgaggaaaatgaccatgaaacatgc atgacagagaaaatgaatctcacattccatgttattaacactggcaatagcatggctcca aatgtaagcatggaaataatggtaccaaattcttttatgccccaaaccaataaactgttc aacattttggatgtccagatgaccactggagaatgcttctttgaaacttatcaaagagaa tgtgcattagagcagccaaagggtgccatggagaccttgaaaggcatattcacgttcttg tcaaagactgataagaggctgttgtattgcataaaagctgacccacactgtttaaatgtg ttatgtaattttgggaaaatggaaagtggaaaagaagccagtgttcacattcagctggaa ggccggccgtccattttagaaatggatgagacatcgtcactcaagtttgaaataagggcg acagcttttccagagccgcatccaaaagttgttgaattaaacaaggaagagaatgttgca catgttttgctagaaggactacatcatcaaagacccaaacgtcattttactatagtgatt atttctagcagtttgctacttggacttatagtacttctattgatttcatatgtcatgtgg aaggctggcttctttaaaagacagtacaaatcaatcctacaagaagaaaatagaagagac agttggagttatgtcaaaagcaataatgacaattaa

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