Oryctolagus cuniculus (rabbit): 100008901
Help
Entry
100008901 CDS
T03373
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
KO
K06527
vascular cell adhesion molecule 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04064
NF-kappa B signaling pathway
ocu04514
Cell adhesion molecules
ocu04668
TNF signaling pathway
ocu04670
Leukocyte transendothelial migration
ocu04933
AGE-RAGE signaling pathway in diabetic complications
ocu05143
African trypanosomiasis
ocu05144
Malaria
ocu05417
Lipid and atherosclerosis
ocu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100008901 (VCAM1)
04668 TNF signaling pathway
100008901 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100008901 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100008901 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100008901 (VCAM1)
05143 African trypanosomiasis
100008901 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100008901 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100008901 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100008901 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocu04090
]
100008901 (VCAM1)
04091 Lectins [BR:
ocu04091
]
100008901 (VCAM1)
CD molecules [BR:
ocu04090
]
Proteins
100008901 (VCAM1)
Lectins [BR:
ocu04091
]
I-type lectins (Siglecs)
100008901 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
Ig_4
C2-set_2
Ig_6
Ig_5
ICAM_N
C2-set_3
ICAM1_3_5_D2
C1-set
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
100008901
NCBI-ProteinID:
NP_001075621
Ensembl:
ENSOCUG00000011697
UniProt:
Q865F2
LinkDB
All DBs
Position
13:complement(63660354..63681708)
Genome browser
AA seq
739 aa
AA seq
DB search
MPGKMVLVFGVSTLLWMMIAASQAFKIETFPESRSLAQIGDSVSLTCTTTGCASPTFSWR
TQIDSPLNGKVRSEGTTSTLTMDPVSFENEHSYLCTATCESKKLEKGIQVEIYSFPKDPE
IHLSGPLEVGEPITVKCLVPDVYPFDRLEVDLLKGDYLMKKQDFLEDMDRKSLETKSLEV
TFIPVIEDIGKLIVCRAKLHIDEIDSEPKERETTKELQVYISPKNTVISVNPSTRLQEGG
SVTMTCSSEGLPVPEIFWSKKQDNGNLQRLSGNATLTLIAMRMEDSGIYVCEGVNQIGKS
RKEVELIVQEKPFTVEISPGPRIAAQIGDPVVLTCSVRGCETPSFSWRTQIDSPLNGQVT
SEGTKSLLTLSPVSFENEHSYLCTVTCGHKKLEKGIQVELYSFPRDPEIELSGPPVNGRP
VTVSCKVPNVYPFDXLEIELLKGETMMKNKEFLEEEDKKSLETKSLEMTFIPTMEDTGKV
LVCQAKLHIDEMEFEPKQRQSTQPLFVNVAPRDIAVWVSPSSIVEEGRSVNMTCSSYGLP
APKILWSRQLKNGDLQPLSENTTLALISTKLEDSGIYVCEGINLAGKSRKEVELVIQVAP
KDIQLTAFPSKSVKEGDTVIISCTCGNVPETWIILKKKAETGDTVLKSIDGAYTIRKAQL
EDAGVYECESKNEVGSQLRSITLDVKGRENSKDYFSPELLVLYCASSLIIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggtcctggtctttggagtctcaactctactttggatgatgattgca
gcttctcaagcttttaaaattgagaccttccccgaatccagatctcttgctcaaattggt
gactctgtctcattgacttgcaccaccacgggctgtgcatccccaacattctcttggaga
acccagatagacagcccgctgaatgggaaggtgaggagcgaggggaccacgtccacattg
accatggaccctgtgagtttcgagaacgaacactcttacctgtgtacagcgacttgtgaa
tccaagaaactggaaaaaggaattcaggtggaaatctactcattccccaaggatccagag
attcatttgagtggccctttggaggttggagaaccaatcacagtcaagtgtttggtccct
gatgtatacccgtttgataggctagaagtggatttactgaaaggtgactacctcatgaag
aaacaggactttctggaagacatggacaggaagtccttggaaaccaagagtttggaagta
acctttattccagtcattgaagatattggaaaacttattgtttgccgagctaaattacat
atcgatgaaattgattctgaacccaaagaaagagagaccaccaaagaactacaggtctac
atttcacccaagaatacagttatctctgtgaatccctccacaaggctgcaagaaggtggc
tctgtgacaatgacatgttccagcgagggtctaccagttccagagattttctggagtaag
aaacaagataatgggaatctacagcgcctttctgggaatgcaactctcacattaattgct
atgaggatggaagattctggaatttatgtgtgtgaaggagttaatcagattgggaaaagc
agaaaagaggtggaattaatagttcaagagaaaccatttaccgttgagatctcccctgga
cccaggattgctgctcagattggggacccagttgtattgacatgtagtgtcaggggctgt
gagaccccatctttctcttggagaacccagatagatagccctctgaatgggcaggtgaca
agtgaagggaccaagtctttgctaacattgagtcctgtgagttttgagaacgaacattct
tacctatgtaccgtgacctgtggacataagaaactggaaaagggaattcaggtggagctc
tactcattccctagagatccagaaattgagctgagcggtccaccagtgaatgggcgccct
gtcactgtcagctgcaaagttcctaatgtgtacccttttgacnggttggagattgaattg
cttaagggagagaccatgatgaagaataaagaatttttggaggaagaggataagaaatcc
ctagagaccaaaagtttagaaatgaccttcatccccaccatggaagacacaggcaaagtt
cttgtttgtcaggccaagttacatattgatgaaatggaatttgaacccaaacaaaggcag
agtacacaaccactttttgtcaatgttgcccccagggatatagctgtctgggtcagtccc
tcgtccatcgtggaggaaggccgttctgtgaatatgacgtgctctagttatggccttcca
gctccaaaaatcctgtggagcagacaactgaaaaatggggacctacagcctctttcagaa
aatacaactttagccttaatttctacaaaactggaagattctggtatttacgtgtgtgaa
gggattaacctggctggaaagagcagaaaagaagttgaattagttatccaagttgctcca
aaagatatacaactgacggcttttccttctaagagtgtcaaagaaggagacactgtcatt
atttcctgtacttgtgggaatgttcctgaaacttggataattctgaagaaaaaagcggag
acaggagacacagtgctaaagtctatagatggtgcatataccattcgtaaggcccagctg
gaggatgcaggagtgtatgaatgtgaatctaaaaatgaggttggctcacaattaagaagt
ataacacttgatgttaaaggaagagaaaatagcaaggactatttttctcctgaacttctc
gtgctctattgtgcatcctccttaataatacctgccatcggaatgatcatttactttgca
agaaaagccaacatgaaaggatcatacagtctggtagaagcacagaaatcaaaagtgtag
DBGET
integrated database retrieval system
