Oryctolagus cuniculus (rabbit): 100008944
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Entry
100008944 CDS
T03373
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100008944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100008944
Transcription factors [BR:
ocu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100008944
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100008944
NCBI-ProteinID:
XP_051681871
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Position
19:53309012..53312153
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AA seq
513 aa
AA seq
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MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVTYTGSYGISSAAATPAGAGHVWMSKQQAPPPPPPPQQQPPPQAPPQA
PQAPPQPQQAPPQPQPAPPQPQQAHTLTTLSSEPGQAQRTHIKTEQLSPSHYSEPQHSPQ
QIAYSPFNLPHYSPSYPPITRSQFDYAEHQNSGSYYSHAASQGSSLYSTFTYMSPAQRPM
YTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccggc
gcccccagccccaccatgtccgaggactcggcgggctcgccctgcccgtcgggctccggc
tccgacaccgagaatacacggccccaggagaacacgttccccaagggcgagccggacctc
aagaaggagagcgaagaggacaagttccccgtgtgcatccgcgaggcggtcagccaggtg
ctcaagggctacgactggacgctggtgcccatgcccgtgcgcgtcaacggctccagcaag
aacaagccccacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgc
aggaagctggccgaccagtacccgcacctgcacaacgccgagctcagcaagaccctcggg
aagctctggagactgctgaacgagagcgagaagcggcccttcgtggaggaggcggagcgg
ctgcgtgtgcagcacaagaaagaccacccggactacaagtaccagccgcggcggaggaag
tcggtgaagaatgggcaggcggaggccgaggaggccacggagcagacgcacatctcgccc
aacgccatcttcaaggcgctgcaggccgactcgccgcactcctcgtccggcatgagcgag
gtccattcccccggcgagcactcgggacaatcccagggtccgccgaccccacccaccact
cccaagaccgacgtgcagccgggcaaggctgacctgaagcgagaggggcgccccctgccc
gaggggggccggcagccccccatcgacttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtcaacgagttcgaccagtacctgccgccc
aatggccacccgggggtgccggccacgcacggccaggtcacctacaccggcagctacggc
atcagcagcgccgccgcgacccccgcgggcgcgggccacgtgtggatgtccaagcagcag
gcgcccccgccgccgccgcccccgcagcagcagccgcccccgcaggcgcccccgcaggcc
ccgcaggcgcccccgcagccgcagcaggcgcccccgcagccgcagccggcgcccccgcag
ccgcagcaggcgcacaccctgaccacgctgagcagcgagccgggccaggcgcagcgaacg
cacatcaagacggagcagctgagccccagccactacagcgagccgcagcactcgccgcag
cagatcgcctacagccccttcaacctcccgcactacagcccctcgtacccgcccatcacg
cgctcgcagttcgactacgcggagcaccagaactcggggtcctactacagccacgcggcc
agccagggctccagcctctactccaccttcacctacatgagccccgcccagcgccccatg
tacacccccatcgccgacacctccggggtgccttccatcccgcagacccacagcccgcag
cactgggagcagccggtgtacacacagctcaccagaccttga
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