Oryctolagus cuniculus (rabbit): 100008997
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Entry
100008997 CDS
T03373
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain precursor
KO
K06236
collagen type I alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04518
Integrin signaling
ocu04611
Platelet activation
ocu04820
Cytoskeleton in muscle cells
ocu04926
Relaxin signaling pathway
ocu04933
AGE-RAGE signaling pathway in diabetic complications
ocu04974
Protein digestion and absorption
ocu05146
Amoebiasis
ocu05165
Human papillomavirus infection
ocu05205
Proteoglycans in cancer
ocu05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100008997 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100008997 (COL1A2)
04518 Integrin signaling
100008997 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100008997 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100008997 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100008997 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
100008997 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
100008997 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100008997 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100008997 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
100008997 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
100008997 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100008997 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocu00536
]
100008997 (COL1A2)
Glycosaminoglycan binding proteins [BR:
ocu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100008997 (COL1A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
100008997
NCBI-ProteinID:
NP_001182597
Ensembl:
ENSOCUG00000012264
UniProt:
G1T2Z5
LinkDB
All DBs
Position
10:complement(31505581..31541365)
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AA seq
1364 aa
AA seq
DB search
MLSFVDTRTVLLLAVASCLATCQSLQEETARRGPAGDRGPRGERGPPGPPGRDGDDGPNG
PPGPPGPPGPPGLGGNFAAQFDGKGGGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGE
PGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVMGPQGARGFPGTPGLPGFKGIRGH
NGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGP
VGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPSGPAGPRGEVGLPGVSGPVGPPGNPGA
NGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGTKGESGNKGE
PGSAGPQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGS
RGSTGPAGVRGPNGDSGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGP
AGARGEPGNIGFPGPKGPTGDPGKNGDKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGG
KGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGAPGESGAAGP
PGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGASGPGGLPGERGAAGIPGGKGEKGETGL
RGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGP
NGFAGPAGAAGQPGAKGEKGTKGPKGENGVVGPAGPVGAAGPSGPNGPPGPAGGRGDGGP
PGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPPGF
PGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGALGEPGPLGIAGP
PGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNAGPVGAAGA
PGPQGSVGPTGKHGNRGEPGPAGSIGPVGAAGPRGPSGPQGIRGDKGEPGDKGPRGLPGI
KGHNGLQGLPGLAGQHGDQGAPGAVGPAGPRGPAGPTGPAGKDGRSGHPGTVGPAGLRGS
QGSQGPAGPPGPPGPPGPPGASGGGYDFGYDGDFYRADQPRSPPSLRPKDYEVDATLKSL
NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGET
CIRAQPENISVKNWYKSSKAKKHVWLGETINGGTQFEYNVEGVTSKEMATQLAFMRLLAN
HASQNITYHCKNSIAYMDEETGNLNKAVILQGSNDVELVAEGNSRFTYTVLVDGCTKKTN
EWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFYVDVGPVCFK
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggacacgcggaccgtgctgctgctcgcagtggcgtcgtgcctagcc
acctgccagtctttacaagaggaaactgcaagaaggggcccagctggagatagaggacca
cgtggagaaaggggtccaccaggccccccaggcagagatggtgatgatggtcccaacggc
cctcccggcccaccagggcctcctggacctcctggcctcggcgggaactttgctgctcag
tttgatggaaaaggaggtggccctggacccatgggtttaatgggacctagaggccctcct
ggtgcagctggtgcccctggacctcaaggtttccaaggacctgctggtgagcctggtgaa
cccggtcagactggcccagcaggagctcgtggtccccctggtccccctggcaaggctggt
gaggatggtcaccccggaaaacctggaagacctggtgagagaggagttatgggaccacag
ggtgctcgtggcttccctggaacccctggacttcctggcttcaaaggcattaggggacac
aacggtctggacggattgaaaggacagcctggtgctcctggtgtgaagggtgagcctggt
gcccctggtgaaaatggaactcctggacaaacaggagcccggggccttccgggtgagcga
ggacgtgtcggtgctcctggcccagctggtgctcgtggcagtgatggcagtgttggtccc
gtgggccctgctggtcctattgggtccgctggccctcccggcttcccaggcgcccctggt
cccaagggtgaaatcggacctgttggtaaccctggtccctccggccctgcgggtccccgt
ggtgaagtgggtcttcccggtgtttctggccccgttggacctcctggtaaccctggagca
aacggcctcactggtgctaagggtgcagctggccttcccggtgttgctggggctcctggt
ctccctggaccccgtggtattcctggccctgtcggtgctgctggtgctaccggtgcccgc
ggacttgttggtgagcctggcccagctggcaccaagggagagagtggtaacaagggcgag
cctggctctgctggaccccaaggacctcctggtcccagtggagaagaaggaaagagaggt
tcccctggcgagcctggctctgctggccctgcaggaccccctggcctgagaggtagtcct
ggttcccgtggtcttcctggagctgacggcagagctggtgtcatggggcctcctggtagt
cgtggttccactggccctgctggagtccgaggccccaatggagattctggtcgccctggt
gagcctggtctcatgggaccccgaggtctccctggatctcctggaaatgttggcccagcc
ggtaaagaaggccctgtcggcctccctggtattgacggcaggcctggcccaattggtcct
gctggagcaagaggagagcctggtaacatcggattccctggacccaaaggccccaccggt
gatcctggcaaaaatggtgacaaaggtcatcctggtcttgccggtgctcggggtgctcca
ggtcccgacggaaacaatggtgctcagggccctcctggcccacagggtgtgcaaggtgga
aaaggtgaacagggtcctgccggtcctccaggcttccagggtctgcctggcccctcaggt
acagccggtgaggttggcaagccaggagagaggggtctccctggtgaatttggtctcccc
ggtcctgccggtccaagaggagagcgtggtgcccccggggagagcggtgctgctggtcct
cccggccctattgggagccgaggtccttctggacccccagggcctgatggaaacaagggt
gaacctggtgtggttggtgctccaggcactgctggtgcgtctggtcctggtggcctccca
ggagagaggggtgctgctggcattcctggaggcaagggagaaaagggtgaaactggcctc
agaggtgaaattggtaaccctggcagagatggtgctcggggtgctcctggtgctgtaggt
gcccctggtcctgctggagccacaggtgaccggggtgaagctggtgctgctggccctgct
ggccctgctggtcctcggggtagtcctggtgaacgtggtgaggttggtcccgctggccct
aatggattcgctggtcctgctggtgctgctggtcaacctggtgctaaaggagagaaagga
accaagggacctaagggtgaaaatggtgttgttggtcctgcgggccccgttggagctgct
ggcccatctggtccaaatggtccccctggtcctgctggaggtcgtggtgatggaggcccc
cctggtatgactggtttccctggtgctgctggacggactggacccccaggcccctctggt
attactggtcctcctggtccccctggtgctgctggtaaagaagggcttcgtggtcctcgt
ggtgaccaaggtccagttggccgaactggagaaacaggtgcatctggcccccctggcttt
cctggagagaaaggtccctctggagaggctggtactgctggacctcctggcaccccaggt
cctcagggtcttcttggtgctcctggcattctgggccttcccggctccagaggtgaacgt
ggtctcccaggtgttgctggtgctttgggtgaacctggtcctcttggcatcgcaggccct
cctggggcccgtggtccccctggtgctgtgggcagtcctggagtcaacggtgctcctggt
gaagccggtcgtgatggcaaccctgggagcgatggtcctccaggtcgcgatggtcagcct
ggacacaagggagaacgtggttaccctggcaatgctggtcctgttggtgctgcaggagca
cctggtcctcaaggctccgtgggccccactggcaaacatggaaaccgtggtgaacctggc
cctgctggttctattggtcccgtcggtgctgctggtccaagaggccctagtggtccacaa
ggcatccggggtgacaagggagagcctggtgacaaggggcccagaggtcttcctggcata
aagggacacaacggattgcaaggtcttcccggtctcgctggtcaacatggtgatcaaggt
gctcccggcgctgtgggtcccgctggccccaggggccctgctggtcctaccggccctgct
ggcaaagacggccgctctggacatcccggcacagttggacctgctggccttcgaggttct
cagggtagccaaggtcctgctggccctcccggtccccccggccctcctggccctcctggc
gcaagcggcggtggttacgactttggttatgatggagacttctacagggctgaccagcct
cgctcaccaccttctctcagacccaaggactatgaagtcgatgccactctgaagtctctg
aacaaccagattgagaccctcctcactcctgaaggctcccggaagaacccagctcgcacc
tgccgcgacctgagactcagccacccagagtggagcagtggttactactggatcgatccc
aaccaaggatgcactatggatgctatcaaagtttactgtgatttctctactggcgaaacc
tgcatccgggcccaacctgaaaacatctctgtcaagaactggtataagagctccaaggcc
aagaagcatgtctggttaggagaaaccatcaatggtggcacccagtttgaatacaacgta
gaaggagtaacctccaaggagatggctacccaacttgccttcatgcgtctgctggccaat
cacgcctctcagaacatcacctaccactgcaagaacagcattgcatacatggatgaggaa
actggcaacttgaacaaggctgtcattctgcagggctccaatgatgttgaacttgttgcc
gagggcaacagcaggttcacttacactgttcttgtcgatggctgcacgaaaaagacaaat
gaatggggaaagacaatcattgaatacaaaacaaataagccatctcgtttgcccttcctt
gatattgcacctttggacatcggtggcgctgaccaagaattctatgtggacgttggccca
gtctgtttcaaataa
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integrated database retrieval system
