Oryctolagus cuniculus (rabbit): 100009079 Help Entry 100009079         CDS       T03373                                  Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism ocu  Oryctolagus cuniculus (rabbit) Brite KEGG Orthology (KO) [BR:ocu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ocu00535]     100009079    00536 Glycosaminoglycan binding proteins [BR:ocu00536]     100009079    04091 Lectins [BR:ocu04091]     100009079 Proteoglycans [BR:ocu00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    100009079 Glycosaminoglycan binding proteins [BR:ocu00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    100009079 Lectins [BR:ocu04091]  C-Type lectins   Lecticans    100009079 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF hEGF EGF_TEN EGF_CA I-set EGF_3 Ig_3 ig Motif Other DBs NCBI-GeneID:  100009079 NCBI-ProteinID:  XP_051695760 Ensembl:  ENSOCUG00000022093 LinkDB All DBs Position Unknown AA seq 2398 aa AA seqDB search MTTLLLVLVALRVIAAAISGDVSDLDNALSVSIPQPSPVRALLGTSLTIPCYFIDPVHPV TTAPSTAPLTPRIKWSRISKDKEVVLLVANEGRVRINSAYQDKVSLPNYPAIPSDATLEI QSLRSNDSGIYRCEVMHGLEDSEATLEVVVKGVVFHYRAISTRYTLDFDRAQRACLQNSA IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE TYDVYCFAEEMEGEVFYATSPEKFTFQEAASECRRLGARLATTGQLYLAWQAGMDMCSAG WLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYTGEDFMDIPEN FFGVGGEEDITVQTVTWPDVELPVPRNITEGEARGSVVLTAKPVLDVSPTAPQPEETFAP GVGATAFPGVENGTEEATRPRGFADEATLGPSSATAFTSADLVVQVTAAPGVAEVPGQPR LPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAAMASAEQLQAAYEAGYEQCDAGWLQDQT VRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDRLEGEVFFATRLEQFTFQE ALEFCESHNATLASTGQLYAAWSRGLDRCYAGWLADGSLRYPIVTPRPACGGDKPGVRTV YLYPNQTGLPDPLSRHHAFCFRGTSEAPSPGPEEGGTATPASGLEDWIVTQVGPGVAATP RAEERTAVPSFATEPGNQTGWEAASSPVGTSLLPGIPPTWPPTGTAAEGTTEGLSTAAMP SASEGPYTPSSLVARETELPGLGVTSVPPDISGDLTSSGEASGLFGPTGQPLGGSASGLP SGELDSGSLTPTVGSGLPIGSGLASGDEDRIQWSSSTEVGGVTSGAEIPETSASGVGTDL SGLPSGAEIPETSASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEILETSASGVG TDLSGLPSGGEIPETFASGVGTDLSGLPSGGEILETFASGVGTDLSGLPSGAEIPETFAS GVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEILET SASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEIPETFASGVGTDLSGLPSGAEI LETSASGVGTDLSGLPSGAEIPETFASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSG GEILETSASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEIPETSASGVGTDLSGL PSGAEILETSASGVGTDLSGLPSGAEILETSASGVGTDLSGLPSGAEIPETFASGVGTDL SGLPSGAEIPETFASGVGTDLSGLPSGGDILETSASGVGTDLSGLPSGAEILETSASGVG TDLSGLPSGAEILETSASGVGTDLSGLPSGGEIPETFASGVGDLSGLPPGREDLETLTSG VGDLSGLSSGKDGLVGSASGALDFGGTLGSGQIPETSGLPSGYSGEYSEVDLGSGPSSGL PDFSGLPSGFPTVSLVDTPLVEVVTATTARELEGRGTIGISGAGEISGLPSSELDVSGGT SGADISGEADVGGEASGLIVRGQPSGFPDTSGEAFGVTEVSGLSSGQPDLSGEASGVLFG SGPPFGITDLSGEPSGQPSGLPEFSGTTHRIPDLVSGATSGSGESSGIAFVDTSVVEVTP TTLREEEGLGSVEFSGFPSGETGLSGTPETIDVSGQSSGTIDSSGFTSLAPEVSGSPSGV AEVSGEASGTEITSGLPSGVFDSSGLPSGFPTVSLVDRTLVESVTQAPTAQEAEGPSDIL ELSGVHSGLPDVSGAHSGFLDPSGLQSGLVEPSGEPPRTPYFSGDFPSTPDVSGEASAAT SSSGDISGLPEVTLVTSEFMEGVTRPTVSQELGQGPPMTHVPKLFESSGEALASGDTSGA APAFPGSGLEASSVPESHGETSAYAEPGTKAAAAPDASGEASGSPDSGEITSVFREAAGE GASGLEVSSSSLASQQGPREGSASQEVSGESTTSYEIGTETSGLPLATPAASEDRAEVSG DLSGRTPVPVDVVTNVPEAEWIQHSQRPAEMWPETKSSSPSYSGEDTAGTAASPASADTP GEPGPTTAAPRSCAEEPCGPGTCQETEGRVTCLCPPGHTGEYCDIDIDECLSSPCVNGAT CVDAIDSFTCLCLPSYGGDLCETDQEVCEEGWTKFQGHCYRHFPDRETWVDAEGRCREQQ SHLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDFRWSDGHPLQFENWRPNQPDNFFAT GEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGDPPVVEHARTFGQKKDRYEINSLV RYQCAEGFTQRHVPTIRCQPSGHWEEPRITCTHPTTYKRRVQKRSSRTLQRSQASSAP NT seq 7197 nt NT seq  +upstreamnt  +downstreamnt atgaccactctgctcttggtcctggtggctctgagagtcatcgcggcagccatctctggg gacgtctcagacctcgacaacgcattgagtgtgagcatcccccagccgtccccggtgcgg gccctcctggggacctcgctgaccatcccctgctacttcatcgaccccgtgcaccccgta accaccgcgccctccacggcccccctcaccccgagaatcaaatggagccggatctccaag gacaaggaggtggtgctgctggtggccaacgagggacgtgtgcgcatcaacagcgcctac caggacaaggtctcgctgcccaactacccggccatccccagcgacgccaccctggagatc cagagcctgcgctccaatgactccgggatctaccgctgtgaggtgatgcacggccttgag gacagcgaggctaccttggaggtggtggtgaaaggtgttgtgttccactatcgggccatc tccacgcgatacaccctggacttcgacagggcgcagcgggcctgtctacagaacagcgcc atcattgccaccccggagcagctgcaggctgcctacgaggatggcttccaccagtgcgac gccggctggctggctgatcagactgtcaggtaccccatccacacaccccgggaaggctgc tacggagacaaggatgagttccctggcgtgagaacctacggcatccgggacaccaacgag acctatgacgtgtactgcttcgcagaggagatggagggtgaggtcttttacgcaacgtcg ccagagaagttcaccttccaggaggcagccagtgagtgccggcggctgggcgcccgcctg gccaccacaggccagctctacctggcctggcaggccggcatggacatgtgcagcgccggc tggctggctgaccgcagtgtgcgctaccccatctccaaggcccggcccaactgcggcgga aacctcctgggtgtcaggaccgtgtacgtgcacgccaaccagaccggctaccccgacccc tcgtcccgctacgacgccatctgctacacaggcgaagatttcatggacatcccagaaaac ttctttggagtgggcggtgaggaggacatcacggtccagacggtgacctggcctgacgtg gagctgcctgtgccccggaacatcactgagggcgaagcccgaggcagcgtggtcctcact gcgaagccggtgctggacgtctcccccacggcgccgcagcccgaggagacgttcgcccct ggcgttggggctaccgccttccccggggtggagaacgggactgaagaggccacccggccc cgtggctttgctgacgaagccacccttggcccaagctccgccacggccttcactagcgcg gacctggtggtgcaggtgaccgctgcccctggtgtggctgaggtccctggacagccacgc ttgccagggggggtcgtgttccactaccgcccggggcccacccgctactcactgaccttc gaggaggcccagcaggcctgcctgcgcacgggggcggccatggcctcggcggagcagctg caggccgcctacgaggccggctacgagcagtgtgatgccggctggctgcaggaccagacc gtcagataccccattgtgagcccacggactccctgtgtgggcgacaaggacagcagccca ggggtcaggacctacggtgtgcgtccaccgtcagaaacctacgatgtctactgctacgtg gacaggctcgagggggaggtgttctttgccacgcgcctcgagcagttcaccttccaggaa gcactggagttctgtgaatcccacaacgccacgctggcctccactggccagctctatgcc gcgtggagccgtggtctggacaggtgctatgcaggctggctggccgatggcagcctccgc taccccatcgtcaccccgcggcctgcctgcggtggggataaacccggtgtgagaaccgtc tacctctaccccaaccagacgggcctcccggacccactgtcccggcaccacgccttctgc ttccgaggtacttcagaggcaccctccccagggccggaggagggtggcacagccacacct gcatctggcctggaggactggattgtcacccaggtggggcctggcgtggctgccaccccc agggcagaggagagaaccgcagtccccagcttcgccactgagccaggaaaccagacagga tgggaagcagcctccagcccagtgggcacctccctgctcccagggatccctcccacgtgg cctcccactggcacggcagccgaggggaccacggaaggtctttccacagccgcaatgcct tctgcctccgaggggccgtacacaccctcatcgctggtggccagggaaactgagctgcca ggtcttggagtgacatctgtgccccccgacatcagtggcgacctcacaagcagtggagaa gcttcgggactctttggccccactgggcagcccctggggggcagtgcaagtggcttgccc tctggagagctggactctggcagtctcacccccacagtgggatcaggcctgcctattgga agtggactggcctcaggtgatgaagacagaattcagtggtccagctctactgaggttggt ggggtgacctctggggcagagattccagagacttctgcctcaggggttgggactgacctc agtgggcttccttctggggcagagattccagagacttctgcctcaggggttgggactgac ctcagtgggcttccttctggagcagagattctagaaacatctgcctcaggggttgggact gacctcagtgggcttccttctggagcagagattctagaaacatctgcctcaggagttggg actgacctcagtgggcttccttctggaggagagattccagagacttttgcctcaggagtt gggactgacctcagtgggcttccttctggaggagagattctagagacttttgcctcaggg gttgggactgacctcagtgggcttccttctggagcagagattccagagacttttgcctca ggggttgggactgacctcagtgggcttccttctggagcagagattctagaaacatctgcc tcaggggttgggactgacctcagtgggcttccttctggagcagagattctagagacttct gcctcaggggttgggactgacctcagtgggcttccttctggagcagagattctagaaaca tctgcctcaggggttgggactgacctcagtgggcttccttctggagcagagattctagaa acatctgcctcaggggttgggactgacctcagtgggcttccttctggagcagagattcca gagacttttgcctcaggagttgggactgacctcagtgggcttccttctggagcagagatt ctagaaacatctgcctcaggggttgggactgacctcagtgggcttccttctggagcagag attccagagacttttgcctcaggggttgggactgacctcagtgggcttccttctggagca gagattctagaaacatctgcctcaggggttgggactgacctcagtgggcttccttctgga ggagagattctagagacttctgcttcaggggttgggactgacctcagtgggcttccttct ggagcagagattctagaaacatctgcctcaggagttgggactgacctcagtgggcttcct tctggggcagagattccagaaacatctgcctcaggagttgggactgacctcagtgggctt ccttctggagcagagattctagaaacatctgcctcaggggttgggactgacctcagtggg cttccttctggagcagagattctagaaacatctgcctcaggagttgggactgacctcagt gggcttccttctggagcagagattccagagacttttgcctcaggagttgggactgacctc agtgggcttccttctggagcagagattccagagacttttgcctcaggagttgggactgac ctcagtgggcttccttctgggggagacattctagaaacatctgcctcaggagttgggact gacctcagtgggcttccttctggagcagagattctagaaacatctgcctcaggggttggg actgacctcagtgggcttccttctggagcagagattctagaaacatctgcctcaggggtt gggactgacctcagtgggcttccttctggaggagagattccagagacttttgcctcagga gttggggacctcagtgggctccctcctggaagggaagatctagagaccttaacttctgga gttggggacctcagtgggttgtcttctggaaaagatggcttggtgggatctgcatctgga gctttggactttggcggaactctaggaagtgggcaaattccagaaacaagtggccttccc tcgggatatagtggagagtactccgaggtcgacctgggaagtggcccctcctccggcctg cctgactttagtgggcttccatctgggttcccaactgtctccctggtagatactccattg gtggaagtggtcacagccaccactgcacgtgaactggaagggagggggaccattggcatc agcggtgcaggggaaatatctggacttccctccagtgagctggacgttagtgggggcacc agtggagctgatattagtggtgaagctgacgttggcggggaggcatctggactcattgtt agaggacagccatcagggttccccgacaccagtggggaagcatttggagtgaccgaggtc agtggattgtcctctggacagccggatctcagtggagaagcatctggagttctttttggg agtggtccaccattcggcataactgatctgagtggagagcccagtgggcagccatctggt ctgccagaattcagcgggacgacacacagaatccctgacctggtttctggagccacaagt ggtagtggtgaatcttctggcattgcctttgtggacaccagtgtggtcgaagtgacacct actacactgagagaagaagaaggcttagggtctgtggaattcagtggcttcccttctggg gagacagggttgtcaggcacgcctgagaccattgatgtcagtggacagtcttctggaaca attgactcaagtgggtttacgtccttggctccggaagtcagtggctcaccaagtggagta gctgaggtcagtggagaagcttctgggactgagatcacgagtggcctgccctcaggagtg tttgacagcagtggacttccgtctggtttccccactgtttctctagtagacagaactttg gtagaatccgtaacccaggccccaacagcccaagaagcagaagggccctcagacattttg gaactcagcggtgtgcactctggattgccggatgtgtctggagcccattctggatttctg gacccaagtgggctacagtctgggctggtggaacccagtggggagccaccacgcaccccg tattttagtggggactttcccagcacccctgatgtgagtggagaagcctctgcagccaca agctccagtggggacatctcaggactgccagaagttactttagtcacttctgagttcatg gagggtgttactcgaccaactgtttctcaagaacttggccaaggaccccctatgacccac gtcccaaagctttttgagtccagtggagaagcccttgcatctggggacacgagtggagct gcaccagccttccctgggtctggactagaagcatcctccgtcccagaatcccacggcgag acatctgcctatgctgagcctgggacgaaggcagctgctgcacctgacgccagtggagaa gcctctgggtcccctgattctggtgaaatcacctctgttttccgagaagctgctggtgag ggagcctcgggcctggaggtgagcagcagctctctggcctctcagcaaggccccagggag ggctcagcatcccaggaagtgagtggagagtctaccaccagctacgaaataggtacagag acatcaggcctgcctctggccactcccgcagcttctgaggacagagctgaagtcagtgga gacctatctggccgcacgccggtaccggtggatgttgtcaccaatgtcccagaggccgag tggatccagcacagccagcgtcctgcagagatgtggccggagaccaagtcctcaagcccc tcgtactcaggagaagacacagctggaacagccgcctctccagcctctgcagacacgcca ggtgaaccagggccaaccacagcagcccccaggtcctgtgctgaagagccctgtggccct ggaacctgccaggagacagagggacgcgtcacatgcctgtgcccccctggccacactggc gagtactgtgacatagacattgatgagtgcctttcaagcccttgtgtgaatggagccacc tgcgtggatgccatcgactctttcacatgcttatgccttcccagctacggaggggacctg tgtgagaccgaccaggaggtctgtgaggagggctggaccaagttccagggccactgttac cgtcacttccccgaccgcgagacctgggtggatgctgagggccggtgtcgggagcagcag tcacacctgagcagcatcgtcaccccggaggagcaggagtttgtcaacaacaacgctcag gactaccagtggatcggcctgaatgacaggaccatcgaaggggactttcgctggtcggat ggacaccccctacaatttgagaactggcgccccaaccagccggacaacttctttgccact ggggaggactgcgtggtgatgatctggcacgagaagggcgagtggaatgacgtcccctgc aattaccacctacccttcacctgtaaaaagggcacagtggcctgtggagaccccccggtg gtggagcacgccaggacctttggacagaagaaggaccggtacgagatcaactccctggtt cggtaccagtgcgcagaaggcttcacccagcgccacgtgcccaccatccggtgccagccc agtgggcactgggaggagccacggatcacctgcacacaccccaccacctacaagcgcaga gtgcagaagcggagttcccggaccctgcagaggagccaggccagctcagcgccctga

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