Oryctolagus cuniculus (rabbit): 100009177 Help Entry 100009177         CDS       T03373                                  Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04611   Platelet activation ocu04820   Cytoskeleton in muscle cells ocu04926   Relaxin signaling pathway ocu04933   AGE-RAGE signaling pathway in diabetic complications ocu04974   Protein digestion and absorption ocu05146   Amoebiasis ocu05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100009177  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     100009177   09152 Endocrine system    04926 Relaxin signaling pathway     100009177   09154 Digestive system    04974 Protein digestion and absorption     100009177  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     100009177   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     100009177   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100009177  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ocu00536]     100009177 Glycosaminoglycan binding proteins [BR:ocu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100009177 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  100009177 NCBI-ProteinID:  XP_002712379 Ensembl:  ENSOCUG00000014988 UniProt:  G1T8J0 LinkDB All DBs Position 7:complement(44255283..44298222) Genome browser AA seq 1462 aa AA seqDB search MMSFVQKVTWLLLALLHPTVILAQQAPAGGCTHLGQSYADRDVWKPEPCQICICDGGYVL CDDVICDEENLDCPNPEIPFGECCAVCPAPETTTPRTVDGLGPQGPKGDPGPPGIPGRNG DPGIPGQPGSPGSPGPPGICESCPTGTQNYSPQFDSYDVKSGIGGIGGGYPGPAGPPGPP GPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPGER GLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPR GAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSN GSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGPPGTN GIPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGAKGEDGKDGSPGEPGANGLPGAA GERGAPGFRGPAGPSGTPGEKGPAGERGGPGPAGPRGATGEPGRDGAPGSPGMRGMPGSP GGPGSDGKPGPPGSQGDSGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGP GLPGPPGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEAGPK GDAGAPGAPGGKGDAGAPGERGPPGLAGTPGLRGGAGPPGPEGGKGPAGPPGPPGASGTP GLQGMPGERGGPGSPGPKGDKGEPGGAGADGAPGKDGPRGPAGPIGPPGPAGQPGDKGEG GAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGIA GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGPSGGPGKD GPPGPPGSNGAPGNPGVAGPKGDAGQPGEKGSPGAQGPPGAPGPLGLAGITGARGLAGPP GMPGPRGSPGPQGVKGESGKPGVNGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGQP GRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAGAR GAPGPQGPRGDKGETGERGANGIKGHRGFPGNPGPPGSPGPSGHQGAVGSPGPAGPRGPV GPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGAAA IAGVGGEKSGGFAPYYGDDPMDFKTNTEEIMSSLKSVNGQIESLISPDGSRKNPARNCRD LKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCVNANPLSIPRKKWWTDSGAEKK HVWFGESMDGGFQFSYGDPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMDQASG NVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCSKHTGEWSKTVFEYRTRKAVRLPIIDI APYDIGGPDQEFGADVGPVCFL NT seq 4389 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggtaacctggttacttcttgctctgcttcatcccactgtt attttggcgcaacaagcacctgctggaggatgcactcaccttggccagtcctatgccgat agagatgtctggaaacccgaaccgtgccaaatatgcatctgcgatggaggatatgttctc tgtgatgatgtaatatgtgatgaagaaaatttagactgccccaacccagaaatcccattt ggagaatgttgtgcagtttgcccagcgcctgaaacaactactccccgcactgttgatggc ctaggacctcaagggcctaagggagatccaggccctcctggtattcctgggagaaatggt gaccctggtattccaggacaaccaggctcccctggttctcctggcccccctggaatctgt gaatcatgccctactggtactcagaactattctccccagttcgattcgtatgatgtcaag tctggcataggaggaattggcggcggctatcctgggccagctggtcctccaggccctccc ggtccccctggtacatctggtcatcctggctcccctggttctccaggataccaaggtccc cctggtgaacctggacaagctggtcctgctggtcctccaggacctcctggtgctattggt ccgtctggtcctgctggaaaagatggagaatcaggacgacctggaagacctggggagaga ggattgcctggacctccaggtatcaaaggtcctgctggtatgcctggcttccctggtatg aaaggacacagaggcttcgacggacgaaatggagaaaagggtgaaacaggtgctcctgga ttaaagggtgaaaatggtcttcctggtgaaaacggagcccctggaccaatgggcccaaga ggggctcctggtgaaagaggacggccaggacttcctggagctgcaggggctcgaggtaac gatggtgcccgaggtagcgacggacaaccaggcccacctggtcctcctggaacagcagga ttccctggatcccctggtgctaagggtgaagttggacctgcagggtcccctggttcaaat ggctcccctggacaaagaggagagcctggaccgcagggacatgctggtgctcaaggtcct cctggccctcctgggaacaatggtagtcctggcggcaaaggtgaaatgggtcctgccggc attcctggagctcctgggctcatgggagcccggggtcctcctggaccacctggtactaac ggtattcctggccagcgaggtgctgctggtgaacccggtaagaacggtgccaaaggagag ccagggccacgtggtgaacgtggtgaagctggttctccaggtattccaggggctaaagga gaagatggcaaagacggctcacctggagaacctggcgccaatggacttccgggagctgcg ggagaaaggggtgcccctggattccgaggacctgctggaccaagtggcactccaggagaa aagggtcctgctggggagcgtggtggtccaggccccgctgggcccagaggagcgactgga gaacctggccgagatggtgcccctggaagtccaggaatgaggggtatgcccggaagccca ggaggaccaggcagtgatgggaaaccagggcctcctggaagtcaaggagacagtggtcgc ccaggtccccctggcccatccggtccccgaggtcaacccggtgtcatgggcttccctggt cctaaaggaaatgatggtgcacctggcaagaacggagaacgaggtgggcctggaggacct ggcctcccgggtcctcctggaaagaatggtgaaactggaccccagggtcccccaggaccc actgggccatctggtgacaagggagacacaggaccccctggtccacaaggattacaaggt ttacctggtaccagtggtcctccaggagaaaatggaaagcccggtgaagcaggtccaaag ggagatgctggtgcacctggagccccaggaggcaagggtgatgctggtgcccccggtgaa cgtggaccccctggtctggcagggactccaggtcttagaggtggtgctggtccccctggc cccgaaggaggaaagggccctgctggtccccctgggccacctggtgcttctggtactcct ggtctgcaagggatgcctggagaaagaggcggtcctggaagtcctggtccaaagggtgac aagggtgaacctggtggcgcaggggctgatggagctcccgggaaagatggtccaagaggt cctgctggtcccattggtccccctggcccagctggccaacctggagataagggtgaaggt ggtgctcctggacttccaggcatagctggacctcgtggtggccctggagagagaggtgaa cacgggcctccaggacctgctggcttccctggtgctcctggacagaatggtgagcctggt gctaaaggagaaagaggtgctcccggtgagaagggtgaaggcggtcctcctggtattgcc ggaccccctggaggttctgggcctgctggtcctcctggtcctcaaggtgtcaaaggcgag cgtggcagtcccggtggcccaggtgctgctggcttccctggtgcacgtggtcttcctggt cctcctggcaataatggtaacccaggacccccaggccccagtggcggtccaggcaaggac gggcctccaggtcctccaggtagcaacggtgctcctggcaaccctggagtggctggacca aaaggcgacgctggccaaccaggagagaagggatcccctggcgcccagggtcctccagga gccccaggcccactcggacttgcaggaattacaggagctcggggtctcgcaggaccacca ggcatgccaggtcctaggggaagccctggccctcagggtgtcaagggtgaaagtgggaag ccaggagttaatggacagaatggagaacgtgggcctcctggaccccaaggtcttcctggc ctggctggcactgctggtgaacctggaagagacggaaaccctggatcagatggtcagcca ggcagagatggagctcctggtggcaagggtgaccgtggtgaaaatggctccccaggggct cctggtgctcctggtcatccaggcccccctggtcctgttggtccagctggaaagagtggt gatcgaggagaaactggccctgctggtccttccggtgctcctggtcctgctggtgcccga ggtgctcctggtccccaaggcccgcgtggtgacaaaggtgaaacgggtgaacgtggcgcc aatggcatcaaaggacatcgaggattccctggtaatccaggccctccaggttctccaggt ccttctggtcatcagggtgcagttggtagtccaggacctgcaggccccagaggacctgtt ggacctagtggcccccctggcaaagatggaacaagtggacatccaggtcccattggacca ccagggcctcgaggtaaccgaggtgaaagaggatcagagggctccccaggccacccagga cagccaggtcctcctggaccccctggtgcccccggtccttgctgtggtggtgcggctgcc atcgctggagttggcggtgaaaaatctggtggttttgccccatattatggagatgatcca atggatttcaaaaccaacaccgaagagattatgtcttcactcaaatctgttaatggacaa attgaaagcctcattagtcctgatggttctcgtaaaaaccctgctcggaactgcagagac ctcaaattctgccatcctgaacttaagagtggagaatactgggttgatcctaaccaaggt tgcaagctggatgctatcaaagtgttctgtaacatggagactggggaaacatgcgtaaac gccaatcctctgagtatcccacgtaagaagtggtggacggactctggtgctgagaagaag catgtttggtttggagagtccatggatggcggttttcagtttagctatggtgatcctgaa cttcctgaagacgtcctggatgtacaactagcattcctccgactgctgtccagccgagcc tcccagaacatcacctatcactgcaagaatagcattgcttacatggatcaggccagtggg aatgtaaagaaagccctgaagctgatgggatcaaatgaaggagaattcaaggcagaagga aacagcaaattcacatacacagttctggaggatggctgctctaaacatactggggaatgg agcaaaacagtctttgaatatagaacacgcaaggctgtgagactacccattatagatatt gcaccctatgatattggtggtcctgatcaagaatttggtgcggacgttggccctgtttgc tttttataa

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