Oryctolagus cuniculus (rabbit): 100009179
Help
Entry
100009179 CDS
T03373
Symbol
SNTA1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04820
Cytoskeleton in muscle cells
ocu05410
Hypertrophic cardiomyopathy
ocu05412
Arrhythmogenic right ventricular cardiomyopathy
ocu05414
Dilated cardiomyopathy
ocu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100009179 (SNTA1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100009179 (SNTA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100009179 (SNTA1)
05414 Dilated cardiomyopathy
100009179 (SNTA1)
05416 Viral myocarditis
100009179 (SNTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100009179
NCBI-ProteinID:
NP_001075802
Ensembl:
ENSOCUG00000011916
UniProt:
Q28626
LinkDB
All DBs
Position
4:13843800..13873533
Genome browser
AA seq
505 aa
AA seq
DB search
MASGRRAPRTGLLELRAGTGAGAGGERWQRVLVSLAEDALTVSPADGEPGPEPGAVREPE
PAQINGAAEPGAAPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKG
LAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVSPYFKNSA
GGTSVGWDSPPASPLQRQPSSPGPQTRNLSEAKHVPLKMAYVSRRCTPSDPEHRYLEICS
ADGQDTIFLRAKDEASARSWAGAIQAQINALLPWVKDELQALLAASSPAGSQDIKQIGWL
TEQLPSGGTAPTLALLTEKELLLYGGLPQTREALSRPARTAPLIATRLVHSGPSKGSVPY
DAELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRP
CNLSVHIDKGFTLWAAEPGAARAVLLRQPFEKLQMSSDDGASLLFLDFGGAEGEIQLDLH
SCPKTMVFIIHSFLSAKVTRLGLLA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcaggcgcgccccgcgaaccggactgctggagcttcgtgccgggacgggc
gcgggggcaggcggagagcgctggcagcgggtgttggtcagtctggcggaggacgcgctg
accgtgagccccgccgacggcgagccaggccccgagcccggcgctgtgcgggagcccgag
cccgcacagatcaacggcgccgctgagccgggcgcggcgcccccgcagttgcccgaggcg
ctgctgctccagcggcgccgcgtgacggtgcgcaaggccgacgcgggcgggctgggcatc
agcatcaaaggaggccgggagaacaagatgcccatcctcatttccaagatcttcaaggga
ctggcggcggaccagacagaggccctgtttgtgggggatgccatcctgtcggtgaatggg
gaagacttgtcctctgccacccacgatgaagcagtgcaggccctgaagaagacgggcaag
gaggtggtgctggaggtcaagtacatgaaggaggtctcaccttatttcaagaattctgct
ggtgggacctcagttggctgggactcacctcctgcctcaccccttcagcggcagccttcg
tcccccgggccccaaacccggaacctcagcgaggccaaacatgtgcccctgaagatggcc
tatgtgtcaaggaggtgcaccccctcggacccggagcacaggtacctagagatctgttca
gcagatggccaagacaccatctttctgagagccaaggatgaggctagtgcgaggtcgtgg
gccggtgccatccaagcccagatcaacgctctgctgccctgggtcaaggacgagctccag
gcactgctggcagcttccagtccagctgggagccaggacatcaagcagattggctggctg
actgagcagctgcccagcgggggcacagccccaaccttggccttgctgacagaaaaggag
ctgctcctctacggtggtctcccccagacccgggaggccctgagccggccggcccgtact
gccccgctcatcgccacgaggctggtgcactcgggcccctcgaagggctccgtgccctac
gatgcagagctctcctttgccctgcgcacgggcacacgccacggggtggacacgcacctg
ttcagcgtggagtcaccgcaggagctggctgcctggacccgccagctggtggacggctgt
caccgggctgccgagggtgtgcaggaggtgtctacagcctgcacgtggaatggccgcccc
tgcaacctctctgtgcacattgacaagggcttcacgctgtgggcggctgagcctggcgcc
gcccgagccgtgctgctccgacagcccttcgagaagctgcagatgtcctcagatgacggt
gccagtctcctcttcctggacttcggtggtgctgaaggcgagatccagctggacctgcac
tcgtgtcccaaaaccatggtcttcatcatccactccttcctctcggccaaagtcacccgc
ctggggctgctggcctag
DBGET
integrated database retrieval system