Oryctolagus cuniculus (rabbit): 100009202
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Entry
100009202 CDS
T03373
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04082
Neuroactive ligand signaling
ocu04721
Synaptic vesicle cycle
ocu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100009202 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100009202 (SLC6A12)
04721 Synaptic vesicle cycle
100009202 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100009202 (SLC6A12)
Transporters [BR:
ocu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100009202 (SLC6A12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100009202
NCBI-ProteinID:
NP_001075819
UniProt:
P48055
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Position
8:complement(74160080..>74183780)
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AA seq
614 aa
AA seq
DB search
MDTKLAVHEDAPPLVSWVPEEGEKLEQEGEDQAKDRGQWTNKMEFVLSVAGEIIGLSNVW
RFPYLCYKNGGGAFFVPYFIFFFSCGIPVFFLEVALGQYTSQGSVTAWKKICPLFQGIGL
ASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCTNSWNTEYCQHALNHSGAGIGSS
TENFTSPVMEFWERRVLGITAGIHDLGALRWELALCLLLAWIVCYFCIWKGVKYTGKVVY
FTATFPYLMLVILLIRGVTLPGAYQGIVYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSVLGFMSQEQGVPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCMECLVTASVDMFPRQLRKSGR
RELLILAIAVLCYLIGLLLVTEGGMYIFQLFDYYACSGICLLFLSVFEVVSISWVYGADR
FYDNIQDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYSPLRYNNVYVYPAWGYCVGW
FLAFSSMACVPLCIVIALLKAQGSFTKRLRQLITPDPSLPQPTQQLRLDSGPGQDRRPSP
AKEGLVTVEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaagctggcagtccacgaggatgcgcctcccctggtctcctgggtccccgag
gagggcgagaaactggagcaggaaggcgaggaccaggcgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggttgagcaatgtctgg
aggtttccttatctctgctacaaaaatggaggtggagccttcttcgtcccctactttatc
ttcttcttcagctgtggcatcccggtgttcttcctggaggtggcgctgggtcagtacacg
agccaggggagtgtcacagcctggaagaagatctgccctctcttccagggcatcgggctg
gcatccgtggtcattgagtcctatttgaacgtctactacatcatcatcctcgcctgggct
ctcttctacctgttcagctccttcacctctgagctgccctggaccacctgcaccaactcc
tggaacacagagtactgccagcacgctctgaaccactcgggagccggcatagggagctcc
actgagaacttcacctcacccgtcatggagttctgggagagacgggtgctgggcatcacg
gcgggcatccatgacctgggcgccctgcgctgggagctggccctgtgcctcctgctcgcc
tggatcgtctgctacttctgcatctggaagggcgtcaagtacacgggcaaggttgtttat
ttcacagccacgtttccctacctgatgctggtcatcctgctgatccgcggcgtgacgctt
cctggagcctaccagggcatcgtctattacttgaagccggatttgctgcgcctcaaggac
ccccaggtgtggatggacgcgggcacccagatcttcttctccttcgccatctgccagggc
tgcctgacggccctgggcagctacaacaagtaccacaacaactgctaccgggactccatc
gccctctgcttcctgaacagcgccaccagcttcgtggctgggttcgtcgtcttctcggtc
ctgggcttcatgtcccaggagcagggggtgcccatttccgaggtggccgagtcaggtcct
ggcctggccttcatcgcgttccccaaggccgtgaccatgatgcccttgtcccagctgtgg
tcctgcctgttcttcatcatgctcatattcctcgggctggacagtcagtttgtctgcatg
gagtgcctggtgacagcctccgtggacatgttccccaggcagctgcgcaagagcgggcgg
cgtgagctcctcatcctggccatcgcagttctgtgctacctgatagggctcctgctggtc
accgagggcgggatgtacatcttccagctgttcgattactacgcttgcagtggcatatgc
ttgctcttcctctccgtgttcgaggtggtctccatcagctgggtgtacggggcggatcgt
ttctatgacaacatccaggacatgattggctaccggccctggcccctggtgaagatctcc
tggctgtttctgacccctggactttgcctggccactttcctcttctccttgagcaagtac
agccctctccgatacaacaacgtctacgtgtatcccgcctggggctactgcgtcggctgg
ttcttggcgttctcctccatggcctgcgtcccactctgcatcgtcatcgccctcctgaag
gcccagggttccttcacgaagcgcctccgacagctcatcacccccgacccgagcctgcca
cagcccacgcagcagctgcgtctggacagcggccctggccaggaccgcaggccgtcccca
gcgaaagagggactcgtcaccgtggagaaggagactcacttgtag
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