Oryctolagus cuniculus (rabbit): 100009352
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Entry
100009352 CDS
T03373
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
ocu04724
Glutamatergic synapse
ocu04726
Serotonergic synapse
ocu04929
GnRH secretion
ocu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100009352 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
100009352 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
100009352 (TRPC1)
04726 Serotonergic synapse
100009352 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
100009352 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100009352 (TRPC1)
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100009352 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
100009352
NCBI-ProteinID:
NP_001076120
Ensembl:
ENSOCUG00000017709
UniProt:
Q9TUN9
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Position
14:37289551..37377983
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AA seq
759 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDY
YMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQKLMERIQNPEY
STTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRL
DIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLA
QARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTV
WFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASY
FTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEES
RNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLF
FMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGI
FCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVV
IVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYM
ISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTD
QATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagtacggacctctcgggcgcctcctcctcctccctgcct
tcctccccatcctcttcgtcgccgaatgaggtgatggcgctgaaggatgtgcgggaggtg
aaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgactat
tatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgta
gatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatatactg
cagcttcttttggactacggttgtcagaaactcatggaacggattcagaatcctgagtat
tcaacaactatggatgttgcacctgttattttagctgctcatcgtaacaactatgaaatt
cttacaatgctcttaaaacaggatgtatctctaccaaagccccatgcagttggctgtgaa
tgtacattgtgttctgcaaaaaacaaaaaggatagcctccggcattccaggtttcgtctt
gatatatatcgatgtttggccagtccagctctaataatgttaacagaggaggatccaatt
ctgagagcatttgaacttagtgctgatttgaaagaactaagccttgtggaggtggaattc
aggaatgattatgaggaactagcccggcagtgtaaaatgtttgctaaagatttgcttgca
caagctcggaattcacgtgaattggaagttatcctaaaccacacatctagcgatgagcct
cttgacaaacgggggttactagaagaaagaatgaatttaagtcgtctaaaacttgctatc
aaatataaccaaaaagagtttgtctcccaatctaactgccagcagttcctgaacactgtt
tggtttggacagatgtcaggttaccgacgtaagcccacctgtaagaagataatgactgtt
ttaacagttggcatcttttggccagttttgtcactttgttatttgatagctcccaaatct
caatttggcagaatcattcacacaccgtttatgaaatttattattcatggagcatcatat
ttcacattcctgctgttactaaatctgtactctcttgtctacaatgaggataagaaaaac
acaatggggcctgcccttgaaagaatagactatcttcttatactgtggattattgggatg
atttggtcagacattaaaagactctggtatgaagggttggaagacttcttagaagaatcc
cgtaatcaactcagttttgtcatgaattccctttatttagcaacttttgccctcaaagtg
gttgctcacaacaagtttcatgattttgctgatcgaaaggactgggatgcattccatcct
acgctggtggcagaagggctttttgcatttgcaaatgttctgagttatcttcgtctcttt
tttatgtacacgaccagctctatcttgggtccattacagatttcaatgggacagatgtta
caagattttggaaaatttcttgggatgttcctccttgttttgttttctttcacaattgga
ctgacacaactgtatgataaaggctacactccaaaagaacagaaggactgtgtaggcatc
ttctgtgaacagcaaagcaatgacaccttccactcattcatcggcacttgctttgctttg
ttctggtatattttctccttagcacatgtggcaatctttgtcacaaggtttagttatgga
gaagaattgcagtcctttgttggagctgttattgttggcacatacaatgttgtggtagtg
attgtgcttaccaagctgctggtggccatgcttcataaaagctttcagttgatagcaaat
catgaagacaaagaatggaagtttgctcgagctaagttgtggcttagctactttgatgac
aagtgtacattacccccacctttcaacatcattccttcaccaaagactatctgctatatg
attagtagcctcagtaagtggatttgctctcacacttcaaaaggcaaggtcaaacggcaa
aacagtctaaaggagtggagaaacttgaaacaaaagagagatgagaactaccagaaagtg
atgtgctgtttagtgcaccgttacttgacttccatgagacagaagatgcagagtacagat
caggcaactgtggaaaatctaaatgaactgcgccaagatctctcaaaattccggaatgaa
ataagggatttacttggctttcggacttctaaatatgctatgttttatccaagaaattaa
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