Oryctolagus cuniculus (rabbit): 100009370
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Entry
100009370 CDS
T03373
Name
(RefSeq) protein XNDC1N
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100009370
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100009370
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
DUF7547
Ank
Rad50_zn_hook
YVC1_C
Motif
Other DBs
NCBI-GeneID:
100009370
NCBI-ProteinID:
XP_051678772
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Position
1:158319354..158359640
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AA seq
1264 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDTQKGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLTDSKQGKNSSGVRMFKHDDFLAP
ASGESWDRLRLTCSQPFTRQQSFGLAFLRVRSSLDSSDDPAMDPTAPVRPGLSQVSSDDP
AAGASPWLANPSIRRTFFPDPQKNTTEMSKLRDMLLQLQPGALGRSARMVLSAACKVPPA
SVASPRSDHAAPGPSHVECAEPRAEDHRPENAVSRRKRRKGQRRRPLSTSNSQPNRRGTA
KAGPREQHPPQAQHGGAQESGQCPLCAGSFSTETLPLHAATCGETTPPHPASPSSSPSSE
APKQRGQKLRVLQSPRLHQPQPNWTEIVNKKLKFPPPLLGAIQEGRLGLVQQLLESGVEA
TGGGPGGPLRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQVHEALLVAVDT
NQPAVVRRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQ
LLMEQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLA
AFQLSRELRRLARKEPEFKPEYITLESLSQDYGFELLGMCRNQSEVTAVLNDLGEDSETE
PEAEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWK
LFIAFLIFLTMPFLCLGYWLAPKSRLGHLLKIPVLKFLLHSASYLWFLIFLLGESLVMET
QLSTFRGRSQSVWETSLHMVWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAA
FALRLLLAGLAYMHCRDAADGAACRYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLA
YILPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIE
DDADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAIFYLLRRIFQFICCCRSCCKTKK
PDYPPIPSFANPGAGPGPGPEGQRVSYRLRVIKALVQRYIETARREFEETRRKDLGNRLT
ELTKTVSRLQSEVAGVRRALADGGTPRPPDGASILSRYITRVRNSFQNLGPPIPETPELM
VPGMVGTQQLSSEMGLQDAGGTRAPAAGEPSPSSPAHVLVHREQEAEGPGDLPQEEDLGA
KEGP
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaagatcagccatgtggtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagacactcaaaagggaccatggctcagctgccctcaggac
aagagtgggcaactgaaagtggaactacagctggagagggcagtgcccattggctacatc
gatgtgggtaactgtggctgtgctttcctgcaaatcgatgtgggccgttcttcctggtct
ctggacagacctttcgtcaccctgctccctgccaccatgctgatgtccctaactgattca
aagcaggggaagaacagctcaggggtccgcatgtttaaacatgatgatttcctggctccg
gcctcaggagagtcttgggatcggcttcgcctgacctgctcccagcccttcacccggcag
cagtccttcgggctggctttcctgcgggtgcgttcctccctggactcctcggatgaccct
gcgatggatcccacggcccctgtccgccctgggctgagtcaggtctcttctgatgaccca
gcagctggtgccagcccctggctggctaatccttccatccggaggacgttcttcccagac
ccccagaagaacaccacggaaatgtcaaagctcagggacatgctattgcagctgcagccg
ggggccctgggccgttcagcccgcatggtgctttctgctgcatgcaaggtgcctccagcc
agtgtggcaagcccaaggagcgaccacgcagccccagggcccagtcatgtggagtgtgca
gagcccagagcagaagaccaccgcccagagaatgctgtgagcaggaggaagagacggaaa
gggcagcgccggcggcctctatctacctctaactctcagccaaacaggagggggacagca
aaggcaggaccaagagaacaacacccaccccaggcccagcacggtggtgcccaggagagt
ggacagtgccccctttgtgcaggctcctttagcactgaaactcttcccctgcatgcggcc
acttgtggagagaccaccccccctcacccggcttctccctcctcatcaccatcttcggag
gccccaaaacaaaggggtcaaaaactcagggtcctgcaatctccacgccttcaccagcca
cagcccaactggaccgagatcgtgaacaagaagctcaaattcccaccgccactcctgggt
gccatccaggaggggcggctgggtcttgtgcagcagctgctggagtcgggggtggaggcc
accggtggtgggcctggagggcccctgcggaacgtggaggaggccgaggaccgctcctgg
agggaagccctcaacctggccatccgcctgggccacgaggccatcactgacgtgctgctg
gccaatgtcaagtttgacttccggcaggtccatgaagccctgctagtggcagtggacaca
aaccagccagccgtggtgcggcgcctgctggcccggctggagcgggagaaaggccgcaag
gtagacacccgctctttctccctggctttctttgactcgtccattgatggctcccgcttt
gcacccggggtcactcccctcaccctggcctgccagaaagacctgtatgagatcgcgcag
ctgctcatggagcagggccacaccattgcccggccgcaccccgtctcctgcgcctgcctg
gagtgcagcaacgcccggcgctacgacctgctgaagttctccctgtcgcgcatcaacacc
taccggggcatcgccagcagggcccacctctcgctggccagtgaggacgccatgctggct
gccttccagctgagccgcgagctcaggcgcctggcacgcaaggagcccgagtttaagcct
gagtacatcacgctggagtcgctgagccaggactatggctttgagctgctgggcatgtgc
cggaaccagagtgaagtcaccgcagtgctcaacgacctgggcgaggacagcgagacggag
cctgaggccgagggcctgggccaggcctttgaggagggcatccccaacctggcgaggctg
cgcctggccgtgaactacaaccagaaacggttcgtagctcaccccatctgccagcaagtc
ctgtcctcgatctggtgtgggaacctggccggctggcgtggaagcaccaccatctggaag
ctcttcatcgccttcctcatcttcctcaccatgcccttcctctgcctcggctactggctg
gcgcccaagtcccggctgggccacctgctcaagatcccagtgctgaagttcctgctgcac
tccgcctcctacctgtggttcctcatcttcctgcttggagagtccctggtcatggagacg
cagctgagcaccttccggggccgcagccagagcgtctgggagacttcactgcacatggtt
tgggtcacaggcttcctgtggttcgagtgtaaggaggtgtggatcgagggcctgcgcagt
tacctcctggactggtggaacttcctggatgtggtcatcctgtccctgtacctggcggcc
tttgccctgcgcctcctgctggctggcctcgcctacatgcactgccgggacgccgcggat
ggggctgcctgccgctatttcaccacagccgagcggagtgagtggcgcacggaggacccc
cagttcttggctgaggtgctcttcgctgtcaccagcatgctgagcttcacccgcctggcc
tacattctgccagcccacgagtcgctgggcactctgcagatctccatcggcaagatgatc
gacgacatgatccggttcatgttcatcctcatgatcatcctgactgccttcctctgtggc
ctcaacaacatctatgtgccctaccaggagacagagcggctgggcaatttcaacgaaaca
ttccagtttctcttctggaccatgttcggcatggaggagcacagtgtggtggacatgcct
cagtttctggtgccggaattcgtgggccgtgccctttacggcatctttactatcgtcatg
gtgattgtgctgctcaacatgctcattgccatgatcaccaattccttccaaaagattgag
gacgatgctgatgtggagtggaaatttgctcgctccaagctctacctatcctacttccga
gagggcctgacgctacccgtgcccttcaacatcctgccctcccccaaggccatcttctac
cttctcaggagaattttccagttcatttgctgttgccgctcctgctgcaaaaccaagaag
cccgactatcccccaatcccctcctttgccaatcctggggcagggccagggccagggcca
gaaggacagcgtgtctcctaccgcctgcgcgtcatcaaagctctggtccagcgctacatt
gagactgcccggcgcgagttcgaggagacccgccggaaagacctaggcaacagactgacg
gagctaaccaagaccgtgtcacggcttcaaagtgaggtggccggcgtgcggcgggccttg
gccgacggaggtacaccccggcctcctgacggtgccagcatcctcagccgttacatcacc
cgggtacgcaacagcttccagaacctgggcccccccatccctgagaccccggagctgatg
gtgccagggatggtggggacccagcagctgtcttcagaaatggggcttcaggatgccggc
ggcaccagggctccagctgccggagagcccagcccctcctccccagctcacgtgctggtg
cacagggagcaggaagccgaggggccgggggacctgccccaggaggaggatttgggggcc
aaggaggggccctga
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