Oryctolagus cuniculus (rabbit): 100009591
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Entry
100009591 CDS
T03373
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
100009591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100009591
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100009591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
ATP-synt_B
FUT8_N_cat
Pns11_12
Motif
Other DBs
NCBI-GeneID:
100009591
NCBI-ProteinID:
XP_051704506
Ensembl:
ENSOCUG00000007266
LinkDB
All DBs
Position
7:67981068..68142607
Genome browser
AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSIEKNITVDN
NGTIVNETVFEFDWKSYIQDTRYHYFLEGVLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAATTASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFQKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSSVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTEHFNNVLAVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTAEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
TGDMFEITEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSDYVTNILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKIKSGANLLVKEDMIIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagag
tctcttgcagctattgaaaggcgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagatgatgatgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggacctg
gacccctactatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctccgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcaccattttgacg
aactgtgtgtttatgactatgagtaaccctcccgactggacaaagaatgtagagtacacc
ttcacaggaatatacacttttgaatcacttataaaaattattgcaaggggtttctgttta
gaagattttactttccttcgggatccatggaactggcttgattttactgtcatcacattt
gcatacgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagggtt
ctccgagcattgaaaacaatttcagtcattccaggactgaagaccatcgtgggggccctg
atccagtcggtgaagaagctctcggatgtcatgatcctgactgtgttctgtctgagcgtg
tttgctctaatagggctgcagctattcatgggcaacctgaggaataagtgtatacagtgg
cctcccaccaatgcttccctggaggaacatagtatagagaagaatattactgtggataac
aatggcacaattgtcaatgaaactgtctttgagtttgactggaaatcatacattcaagat
acaagatatcattatttcctggagggtgttttggatgcattactatgtggaaatagctct
gacgcaggccaatgtccagaaggctacatgtgtgtaaaagctggtagaaaccccaattat
ggctacacaagttttgataccttcagctgggcttttttatccttgtttcgactgatgact
caggacttttgggaaaatctttaccagctgacattacgtgctgctggaaaaacatacatg
atattttttgtgctggtcattttcttgggctcattctacctgataaacctgatcctggct
gtggtggccatggcctatgaggagcagaatcaggcaacactggaagaggctgagcagaaa
gaagctgagtttcagcagatgcttgaacagttaaaaaagcaacaagaggcagctcagcag
gcagcagctaccacggcctcagagcattccagagagcccagtgcagcaggcagactctcg
gatagctcctctgaagcctccaagttgagttccaagagtgcaaaggaaagaagaaatcgc
aggaagaaaagaaaacagaaggagcagtctggtggggaagagaaagatgaggacgaattc
cagaaatctgaatctgaagacagcatcagaaggaaaggctttcgcttctccattgaaggg
aaccgattgacctatgaaaagaggtactcttccccacaccagtcattgttgagcatccgt
ggctccctattttctccaaggagaaatagcagaacaagcctattcagcttcagaggacgg
gcaaaggatgtgggttctgagaacgactttgctgatgatgaacacagcacctttgaggat
aatgaaagccggagagactccttgtttgtgccccgacgtcacggagagcgccgcaacagt
aacctcagtcagaccagtaggtcatcccggatgttggcggtgtttccagcgaatgggaag
atgcacagcagtgtggattgcaatggtgtggtttccttggttggtggaccttcagttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgaaatgagaaagagaaggtcaagttctttccacgtttcc
atggactttctggaagatccttcccaaaggcaaagagcaatgagcatagccagcatccta
acaaatacagtggaagagcttgaagaatccaggcagaaatgcccaccatgttggtataaa
ttttccaatatattcttaatatgggactgttctccgtactggttaaaagtgaaacacatt
gtcaacctggtcgtgatggacccatttgttgacctggccatcaccatctgcattgtctta
aacactcttttcatggccatggagcactatccaatgacagaacatttcaataatgtgctt
gcagtaggaaacttggttttcactgggatcttcacagcagaaatgtttctgaaaattatt
gccatggatccttattattatttccaagaaggctggaatatctttgatggttttattgtg
acccttagtctggtagaacttggcctcgcaaatgtggaaggattatcagtgctccgttca
ttccgactgctccgagttttcaagttggcaaaatcttggccaacattaaatatgctaata
aagatcatcggcaattcagtgggagctctgggaaatctaaccctggtgttggccataata
gtcttcatctttgctgtggttggcatgcaactctttggcaaaagctacaaagattgtgta
tgcaaaattgccagtgactgcaaactcccccgctggcacatgaatgacttcttccactcc
ttcctgatcgtgttccgtgtgctgtgtggagagtggatagagaccatgtgggactgtatg
gaggttgctggtcaagccatgtgccttactgtcttcatgatggtcatggtgattggaaac
ctagtggtcctgaacctctttctagccttgcttctgagctcatttagtgcagacaacctt
gcagccactgatgatgacaatgaaatgaacaaccttcaaattgctgttgacagaatgcac
aaggggatagcttatgttaaaagaaaaatatatgaatttatccaacagtccttcgtcagg
aaacaaaagattttggatgagattaaaccacttgatgatctaaacaataaaaaagacagt
tgtatgtccaaccatacagcagaaattgggaaagatcttgactatcttaaagatgtaaat
ggaaccacaagtggcataggaaccggcagcagtgttgaaaaatacattattgatgaaagt
gattacatgtcattcataaacaatcctagtcttactgtgactgtacctattgctgtaggg
gagtctgactttgaaaatttaaatacagaggacttcagtagtgaatcagatctggaagaa
agcaaggagaaacttaatgaaagcagtagctcatcggaaggcagcactgtggacatcggc
gcacctgcagaagaacagcctgtggtagaaccagaagaaaccctagaacctgaagcttgt
tttaccgaaggctgtgtacaaagattcaagtgttgtcaaatcagtgtggaagaagggaga
ggcaaacagtggtggaacctgagaagaacatgtttccgaatagttgaacataactggttt
gagaccttcattgtgttcatgattctccttagtagcggtgctctggcatttgaagatata
tatattgatcagcgaaagacaattaagactatgttagaatatgctgataaagttttcact
tacattttcattctggaaatgcttctaaaatgggtggcatatggctatcaaacatacttc
accaatgcctggtgttggctggatttcttaattgttgatgtttcattggtcagtttaact
gcaaatgccttgggttactcagaacttggtgccatcaaatctctcaggacgctaagagct
ctgagacccttaagagccttatcacgatttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtgcttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccaca
actggtgacatgtttgaaatcaccgaagtgaataatcattctgattgcctaaaactaata
gaaagaaatgagaccgctcgatggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgctgcaagttgcaactttcaagggatggatggatataatgtatgca
gcagttgattctagaaatgtggaactccagcctaagtatgaggaaagtctgtatatgtat
ctttactttgttattttcatcatctttgggtccttcttcaccctgaacctgtttattggt
gtcatcatagataatttcaaccagcagaaaaagaagtttggaggtcaagacatctttatg
acagaagaacagaaaaaatactacaatgcaatgaaaaaattaggatcaaaaaagccacaa
aagcctatacctcgaccaggaaacaaatttcaaggaatggtctttgacttcgtaactaga
caagtttttgacataagcatcatgattctcatctgtcttaacatggtcacaatgatggtg
gaaacagatgaccagagtgactatgtgactaacattttgtcacgcatcaatctggtgttc
attgtgctgttcactggagagtgtgtgctgaagcttatctccctgcgtcattattatttc
accattggctggaatatatttgattttgtggttgtaattctttctattgtaggcatgttt
cttgctgagttaatagagaaatattttgtgtcacctaccctgttccgtgtgatccgcctc
gccaggattggccgaatccttcgtctgatcaaaggagcaaaggggatccgcacattgctc
tttgctttgatgatgtcccttcctgcattgtttaacatcggcctcctgctcttcctggtc
atgttcatctacgccatatttgggatgtccaactttgcctatgttaagagggaagttgga
attgatgacatgttcaactttgagacttttggcaacagcatgatctgcctgttccagatt
accacttctgctgggtgggatggattgttagcacctattctcaatagtaaaccacctgac
tgtgaccctaataaagttaaccctggaagctcagttaagggagactgcgggaacccatct
gttgggattttctttttcgtcagttacatcatcatatccttcctggtggtggtgaacatg
tacatcgctgtcatcctggagaacttcagtgttgctacggaggaaagtgcagagcccctg
agcgaggatgacttcgagatgttctacgaggtttgggagaagttcgaccccgatgcaacc
cagttcatggaatttgaaaaactatctcagtttgcagcagctcttgaacctcctctcaat
ttgccacaaccaaacaagctgcagctcattgctatggatttgccaatggtgagcggtgac
agaatccactgtcttgacatcttatttgcttttacaaagagggtcctaggggaaagtgga
gagatggatgcgctacgaatacagatggaagagcggttcatggcttctaatccttccaag
gtctcttatcaaccaattactactactttaaaacgaaaacaagaggaagtatctgctgtt
attattcagcgtgcttacagacggcatcttttaaagcgaacagtaaaacaagcttcattt
acatacaacaaaaataaaatcaaaagtggggctaatcttcttgtgaaagaagacatgata
attgacagaataaatgaaaactctatcacagagaaaactgatctgaccatgtccacagca
gcttgtccaccctcctacgatcgggtgacaaagccaattgtggagaaacacgagcaagaa
ggtaaagacgaaaaagccaaagggaaataa
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integrated database retrieval system
