Oryctolagus cuniculus (rabbit): 100328641
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Entry
100328641 CDS
T03373
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03410
Base excision repair
ocu04140
Autophagy - animal
ocu04217
Necroptosis
ocu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100328641 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100328641 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
100328641 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100328641 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100328641 (HMGB1)
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100328641 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100328641 (HMGB1)
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
100328641 (HMGB1)
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100328641 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
100328641 (HMGB1)
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100328641 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
100328641
NCBI-ProteinID:
NP_001164752
Ensembl:
ENSOCUG00000021335
UniProt:
G1U2Q5
LinkDB
All DBs
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcataagaagaagcacccagatgcttccgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaagggaaaattt
gaagacatggcaaaggcggacaaggctcgttatgaaagagaaatgaaaacctatatccct
cctaaaggggagacaaaaaagaagttcaaggatcccaatgcgcccaagaggcctccttcg
gcctttttcttgttctgttctgagtatcgccccaaaatcaaaggagagcatcctggcctg
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccctacgagaagaaggctgccaagctgaaggaaaagtacgagaaggatattgct
gcataccgagctaaaggaaaacctgatgcagcgaaaaagggagtcgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaggatgaagaagacgaagaggatgaggaggaagag
gaagacgaggaagatgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system