Oryctolagus cuniculus (rabbit): 100328673 Help Entry 100328673         CDS       T03373                                  Symbol PSMB4 Name (RefSeq) proteasome subunit beta type-4   KO K02736   20S proteasome subunit beta 7 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100328673 (PSMB4)  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100328673 (PSMB4)    05012 Parkinson disease     100328673 (PSMB4)    05014 Amyotrophic lateral sclerosis     100328673 (PSMB4)    05016 Huntington disease     100328673 (PSMB4)    05017 Spinocerebellar ataxia     100328673 (PSMB4)    05020 Prion disease     100328673 (PSMB4)    05022 Pathways of neurodegeneration - multiple diseases     100328673 (PSMB4)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100328673 (PSMB4)   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100328673 (PSMB4) Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100328673 (PSMB4) Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100328673 (PSMB4) Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100328673 (PSMB4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Motif Other DBs NCBI-GeneID:  100328673 NCBI-ProteinID:  NP_001164776 Ensembl:  ENSOCUG00000015257 UniProt:  B7NZD7 LinkDB All DBs Position 13:complement(41057146..41059710) Genome browser AA seq 261 aa AA seqDB search MEAFLESRAGLWAGGPAPGQFYRIPSTPASSVDPASALCGSPIARTQNPMVTGTSVLGVK FDGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEE LLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAP SLATGYGAYLAQPLLREVLEKQPVLSQAEARELVERCMRVLYYRDARSYNRYQIATVTEK GVEIEGPLSAETNWDIAHMIR NT seq 786 nt NT seq  +upstreamnt  +downstreamnt atggaagcgtttctggagtcgcgggccgggctttgggccgggggcccagctcctggacag ttttaccgcatcccgtccactcctgcttcctccgtggatccggcgtccgcgctctgcggg agtccgatcgcgcggacccagaaccccatggttaccgggacctcggtcctcggcgtcaag ttcgatggcggggtggtgattgccgcagacatgctgggctcctacggctccttggcgcgt ttccgcaacatctctcgaatcatgcgggtcaacaacagcaccatgctgggtgcctccgga gactacgctgatttccagtacttgaagcaagtgctcggccaaatggtcattgatgaggag ctgttgggagatggacacagctatagccccagagccattcactcgtggctgaccagggcc atgtacagccgccgctccaagatgaaccctctgtggaacaccatggtcatcggcggctac gctgatggagagagcttcctcggttatgtggacatgcttggtgtggcctatgaagcccct tcgctggccactggttatggtgcatacttggctcagcctctgctgcgagaagtcctggag aagcagccggtgctgagccaggccgaggcccgcgagctggtggagcgctgcatgcgagtg ctgtactatcgagacgcccgttcttacaacaggtatcaaattgccacggtaactgaaaaa ggtgttgaaatcgagggaccactgtctgcagagaccaactgggatattgcccacatgatc aggtga

Oryctolagus cuniculus (rabbit): 100338005 Help Entry 100338005         CDS       T03373                                  Name (RefSeq) proteasome subunit beta type-5 isoform X1   KO K02737   20S proteasome subunit beta 5 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100338005  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100338005    05012 Parkinson disease     100338005    05014 Amyotrophic lateral sclerosis     100338005    05016 Huntington disease     100338005    05017 Spinocerebellar ataxia     100338005    05020 Prion disease     100338005    05022 Pathways of neurodegeneration - multiple diseases     100338005  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100338005   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100338005 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100338005 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100338005 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100338005 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Motif Other DBs NCBI-GeneID:  100338005 NCBI-ProteinID:  XP_002718121 Ensembl:  ENSOCUG00000013109 UniProt:  G1T4Q9 LinkDB All DBs Position 17:complement(44158914..44167239) Genome browser AA seq 263 aa AA seqDB search MALASVLETPLPVNQRGFFGLGGRTDLLDLGPGSPSDGLSLTAPGWGVPEEPGIEMLHGT TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAR QCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRI SGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVRE DGWIRVSSDNVADLHDKYSGSTP NT seq 792 nt NT seq  +upstreamnt  +downstreamnt atggcgctggccagcgtgttggagacgccgttacctgtgaaccagcgcgggtttttcgga ctcgggggtcgtacggatctgctggatttgggtccagggagtcccagtgatgggctgagc ctgaccgcgcccggctggggcgtcccagaggagccgggaatcgaaatgcttcatggaacc accaccctggccttcaagtttcgccatggcgtcatcgttgcggctgactcccgggctaca gcaggtgcatatatcgcctcgcagacggtaaagaaagtcatagagatcaacccctacctg ctgggcaccatggctgggggcgcagcagactgcagcttctgggagcgcctgctggcccgg cagtgtcggatctatgagcttcgtaacaaggagcgcatctcagtggcagctgcctccaag ctgctggccaacatggtctaccagtacaaaggcatggggctgtccatgggcaccatgatc tgcggctgggataagcggggcccgggcctctactacgtggacagtgaagggaaccgaatc tctggagccaccttctctgtaggttcgggctctgtgtatgcttatggcgtcatggatcga ggctattcttacgacctagaagtggagcaggcctatgatctggcccgccgcgccatctac caagccacctacagagatgcctactcaggaggcgctgtcaacctctaccacgtgcgggag gatggctggatccgggtctccagtgacaatgtagctgatctgcacgacaagtatagtgga tccaccccctga

Oryctolagus cuniculus (rabbit): 100338247 Help Entry 100338247         CDS       T03373                                  Name (RefSeq) proteasome subunit alpha type-5 isoform X2   KO K02729   20S proteasome subunit alpha 5 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100338247  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100338247    05012 Parkinson disease     100338247    05014 Amyotrophic lateral sclerosis     100338247    05016 Huntington disease     100338247    05017 Spinocerebellar ataxia     100338247    05020 Prion disease     100338247    05022 Pathways of neurodegeneration - multiple diseases     100338247  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100338247   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100338247 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100338247 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100338247 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    alpha type subunits     100338247 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Proteasome_A_N Motif Other DBs NCBI-GeneID:  100338247 NCBI-ProteinID:  XP_002715852 Ensembl:  ENSOCUG00000039085 UniProt:  G1T670 LinkDB All DBs Position 13:55035698..55069336 Genome browser AA seq 241 aa AA seqDB search MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLME PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD I NT seq 726 nt NT seq  +upstreamnt  +downstreamnt atgttcctcacccggtctgagtacgacagaggtgtgaatactttttctcctgaaggaaga ttattccaagtggaatatgccattgaggccatcaagcttggttctacagctattggtatc cagacagcagagggtgtttgcctggccgtggagaagagaattacctccccacttatggag cccagcagcattgagaaaattgtagagattgatgctcacataggttgtgccatgagtggg cttattgctgatgctaagactttaattgataaagccagagtggagacacagaaccattgg ttcacttacaacgagacaatgacagtggagagtgtgacccaggctgtatcaaatttggct ctacagtttggagaagaagatgcagatccaggtgccatgtctcgtccctttggagtagca ctgttatttgggggagttgatgaaaaaggaccccagctgtttcacatggacccatctgga acctttgtacagtgtgatgctcgagcaattggctctgcctcagagggggcccagagctcc ttgcaggaagtttaccacaagtcaatgacactgaaagaagcaatcaaatcttcactcatc atcctcaaacaagtcatggaggagaagctgaatgcaactaacatagagctagccacggtg cagcctggccagaatttccacatgttcacaaaggaagagcttgaagaggttatcaaggac atttaa

Oryctolagus cuniculus (rabbit): 100338517 Help Entry 100338517         CDS       T03373                                  Name (RefSeq) proteasome subunit alpha type-3   KO K02727   20S proteasome subunit alpha 7 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100338517  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100338517    05012 Parkinson disease     100338517    05014 Amyotrophic lateral sclerosis     100338517    05016 Huntington disease     100338517    05017 Spinocerebellar ataxia     100338517    05020 Prion disease     100338517    05022 Pathways of neurodegeneration - multiple diseases     100338517  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100338517   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100338517 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100338517 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100338517 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    alpha type subunits     100338517 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Proteasome_A_N Motif Other DBs NCBI-GeneID:  100338517 NCBI-ProteinID:  XP_002718317 LinkDB All DBs Position 17:77423207..77445805 Genome browser AA seq 255 aa AA seqDB search MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL QMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVPKDVREEAEKYA KESLKEEDESDDDNM NT seq 768 nt NT seq  +upstreamnt  +downstreamnt atgagttccatcggcaccgggtatgacctgtcagcctctacattttctcctgatggaaga gtttttcaagtagaatatgctatgaaggctgtggaaaacagtagtacagctattggaatc agatgtaaagatggtgttgtctttggagtagaaaaattagtcctttctaaactttatgaa gaaggttctaacaaacgactttttaatgtcgatcggcatgttggaatggcagtagcagga ctgctggcagatgctcgttctttagcagacattgcaagagaagaagcttccaactttaga tctaactttggctataatattccactaaaacatcttgcagacagagtggccatgtatgtc catgcttacaccctctacagtgctgtcagaccttttggatgcagtttcatgttagggtct tacagtgtgaatgatggcgcacagctgtacatgattgacccgtcaggtgtttcatacggt tattggggctgtgccattggcaaagccaggcaagcagcaaagacagaaatagagaagctt cagatgaaagaaatgacctgccgtgatgttgttaaagaagttgccaaaataatttacata gtgcatgatgaagttaaggataaagcttttgagttagagctcagctgggttggtgaatta actaaaggaaggcatgaaattgttccaaaagatgtaagagaagaagcagagaaatatgct aaggaatctttgaaggaagaagatgaatcagatgatgacaatatgtaa

Oryctolagus cuniculus (rabbit): 100338566 Help Entry 100338566         CDS       T03373                                  Name (RefSeq) proteasome subunit alpha-type 8   KO K02731   20S proteasome subunit alpha 4 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100338566  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100338566    05012 Parkinson disease     100338566    05014 Amyotrophic lateral sclerosis     100338566    05016 Huntington disease     100338566    05017 Spinocerebellar ataxia     100338566    05020 Prion disease     100338566    05022 Pathways of neurodegeneration - multiple diseases     100338566  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100338566   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100338566    03051 Proteasome [BR:ocu03051]     100338566 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100338566 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100338566 Membrane trafficking [BR:ocu04131]  Endosome - Lysosome transport   Rab GTPases and associated proteins    Rab associated proteins     100338566 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    alpha type subunits     100338566 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Proteasome_A_N Motif Other DBs NCBI-GeneID:  100338566 NCBI-ProteinID:  XP_002713513 LinkDB All DBs Position 9:complement(48740135..48801427) Genome browser AA seq 250 aa AA seqDB search MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERT VRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKY TQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTE DAIANDNEAIKLAIRALLEVVQSGGKNIELAIIRRNQPLKMFNAKEIELQVTEIEKEKEE AEKRKSKKTT NT seq 753 nt NT seq  +upstreamnt  +downstreamnt atggcatctcggtacgacagggcaatcactgtcttctccccggacggacaccttttccaa gtggaatatgctcaagaagcggtgaagaaaggatccacagcggttggaattcggggtacc aatattgttgtgcttggagtagaaaaaaaatctgttgccaaacttcaagatgaaagaact gtgaggaaaatttgtgcccttgatgaccacgtctgcatggcttttgcaggactgactgct gatgctagagtggtaataaacagagctcgtgtggagtgccagagccataagcttacagtt gaggacccagtcactgtggaatatataactcgcttcatagcaactttaaagcagaaatat actcagagcaatggacgaagaccttttggtatttctgccttaattgtaggttttgatgat gatggtatcccaagattgtatcagacagatccctctggtacctaccatgcttggaaggca aatgcaataggccgaagtgctaaaactgttcgagaatttctagaaaaaaattacacagaa gatgctatagcaaacgacaatgaagctattaaattggcaataagagctttgctagaagtt gtccagtctggtggaaaaaatattgaacttgccataataagaagaaatcaacctttgaag atgtttaatgccaaagaaattgaattacaagtaaccgaaatagaaaaggaaaaggaagaa gcagagaagagaaaatcaaagaagactacctaa

Oryctolagus cuniculus (rabbit): 100342149 Help Entry 100342149         CDS       T03373                                  Name (RefSeq) proteasome subunit beta type-6   KO K02738   20S proteasome subunit beta 1 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100342149  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100342149    05012 Parkinson disease     100342149    05014 Amyotrophic lateral sclerosis     100342149    05016 Huntington disease     100342149    05017 Spinocerebellar ataxia     100342149    05020 Prion disease     100342149    05022 Pathways of neurodegeneration - multiple diseases     100342149  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100342149   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100342149 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100342149 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100342149 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100342149 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome DUF1502 Motif Other DBs NCBI-GeneID:  100342149 NCBI-ProteinID:  XP_002718873 Ensembl:  ENSOCUG00000011848 LinkDB All DBs Position 19:9944220..9946207 Genome browser AA seq 239 aa AA seqDB search MAATLVAARGAGPAPAWGQEALAPDWENREVSTGTTIMAVQFDGGVVLGADSRTTTGSYI ANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEM CYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREG MTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPKFTIATLPPP NT seq 720 nt NT seq  +upstreamnt  +downstreamnt atggcggccaccttagtagccgctcggggagcgggtccggcaccggcctgggggcaagag gccctagccccggactgggaaaaccgggaagtctccacagggaccacaattatggccgtg cagttcgacgggggcgtggtcctgggggccgactcgagaacaaccacggggtcctacatc gccaatcgagtgactgacaaactgactcccattcatgaccacattttttgctgccgctcg ggctcagcagctgatacccaggcagtcgctgatgctgtcacctatcagcttggtttccac agcattgaactgaatgagccccccctggtgcacacagcagccagcctcttcaaggagatg tgttaccggtaccgggaagacctgatggcagggatcatcattgccggctgggaccctcaa gaaggcgggcaggtgtactcagtccccatggggggcatgatggtgaggcagtcctttgcc atcggaggctctgggagttcgtacatctacggctacgtggacgccacctaccgggaaggc atgaccaaggaagagtgtctgcagttcaccgccaacgctctcgctttggccatggagcgg gacggctccagtggtggggtgatccgtctggcagccatcgccgaatcaggggtggagcgc caagtgcttctgggagaccagatacccaaattcaccattgccactttaccacccccctga

Oryctolagus cuniculus (rabbit): 100342159 Help Entry 100342159         CDS       T03373                                  Name (RefSeq) proteasome subunit alpha type-4   KO K02728   20S proteasome subunit alpha 3 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100342159  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100342159    05012 Parkinson disease     100342159    05014 Amyotrophic lateral sclerosis     100342159    05016 Huntington disease     100342159    05017 Spinocerebellar ataxia     100342159    05020 Prion disease     100342159    05022 Pathways of neurodegeneration - multiple diseases     100342159  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100342159   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100342159 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100342159 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100342159 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    alpha type subunits     100342159 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Proteasome_A_N TRP_N Motif Other DBs NCBI-GeneID:  100342159 NCBI-ProteinID:  XP_008246673 LinkDB All DBs Position Unknown AA seq 261 aa AA seqDB search MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKH EEEEAKAEREKKEKEQKEKDK NT seq 786 nt NT seq  +upstreamnt  +downstreamnt atgtctcggagatacgactccaggaccaccatcttttctcccgaaggtcgcctgtaccag gtggagtacgccatggaggctatcggacacgccggcacctgcctgggcattttggctaac gacggagttttgctcgcggccgagaggcgcaacatccacaagctcctggacgaggtcttt ttctccgagaagatttataaactgaacgaggacatggcctgcagcgtggcgggcatcacg tcggacgcgaacgttctcactaatgagctgagactcatcgcgcaaaggtatctcctacag tatcaggagcccatcccctgtgagcagctggtgacagcgctgtgtgacatcaagcaagct tacacacagtttggaggcaagcgtccctttggtgtctccttgctgtacattggctgggat aagcactacggctttcagctctaccagagtgatcccagcgggaattacgggggctggaaa gccacctgcatcggaaacaacagcgcggcagctgtgtcaatgttgaaacaagactacaag gagggggagatgaccttgaagtcggcgctcgctttagccatcaaagtgctcaacaagacc atggatgtcagcaagctgtccgctgagaaagtggagattgccacgctcacgagagagaac ggaaagacggtcatccgagtgctcaaacagaaggaggtggagcagctgatcaagaagcac gaggaagaggaggccaaagccgagcgagagaagaaggagaaagagcagaaggagaaggat aaatag

Oryctolagus cuniculus (rabbit): 100343622 Help Entry 100343622         CDS       T03373                                  Name (RefSeq) proteasome subunit beta type-1   KO K02732   20S proteasome subunit beta 6 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100343622  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100343622    05012 Parkinson disease     100343622    05014 Amyotrophic lateral sclerosis     100343622    05016 Huntington disease     100343622    05017 Spinocerebellar ataxia     100343622    05020 Prion disease     100343622    05022 Pathways of neurodegeneration - multiple diseases     100343622  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100343622   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100343622 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100343622 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100343622 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100343622 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Cytochrom_C1 Motif Other DBs NCBI-GeneID:  100343622 NCBI-ProteinID:  XP_002723544 Ensembl:  ENSOCUG00000007973 UniProt:  G1SU71 LinkDB All DBs Position Unknown AA seq 241 aa AA seqDB search MLSSPAMYSGPGRDLGMDVHSVAGPVQRRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEG FSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQ VGFKNMQNVEHIPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRK D NT seq 726 nt NT seq  +upstreamnt  +downstreamnt atgttgagctctccagccatgtactcgggtcccggccgagacctggggatggacgtgcac agtgtcgcgggcccggtgcagcggcgcttttcgccttacgccttcaacggaggtactgta ttggcaattgctggagaagatttttccattgttgcttctgacactcgattgagtgaagga ttttcaattcacacgcgggacagccctaaatgttacaaattaacagatagaacagtcatc ggatgcagtggtttccatggagactgtcttaccttgacaaagattattgaagcaagacta aagatgtataagcattccaataataaggccatgactacaggggcaattgctgcaatgctg tctacaatcctgtactccaggcgcttctttccatactatgtttacaacatcatcggtgga cttgatgaagaagggaagggagccgtgtacagctttgacccagtgggatcctaccagcga gactccttcaaggccggaggctctgccagtgccatgctgcaacctctgctggacaaccag gttggctttaagaacatgcagaacgttgagcacatcccactgaccttggatagagccatg cgactggtgaaagatgtcttcatttctgcagccgagagggacgtgtatacaggggacgca ctccggatctgcattgtaaccaaagaaggcatcagggaggagactgtccccctgcggaag gactga

Oryctolagus cuniculus (rabbit): 100348523 Help Entry 100348523         CDS       T03373                                  Name (RefSeq) proteasome subunit beta type-2   KO K02734   20S proteasome subunit beta 4 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100348523  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100348523    05012 Parkinson disease     100348523    05014 Amyotrophic lateral sclerosis     100348523    05016 Huntington disease     100348523    05017 Spinocerebellar ataxia     100348523    05020 Prion disease     100348523    05022 Pathways of neurodegeneration - multiple diseases     100348523  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100348523   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100348523 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100348523 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100348523 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100348523 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Motif Other DBs NCBI-GeneID:  100348523 NCBI-ProteinID:  XP_002720739 Ensembl:  ENSOCUG00000013198 UniProt:  G1T4X8 LinkDB All DBs Position Unknown AA seq 201 aa AA seqDB search MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDRAVELLRKCLEELQKRFILNLPTFSV RIIDKDGIHDLDNISFPKQGS NT seq 606 nt NT seq  +upstreamnt  +downstreamnt atggagtacctcattggcatccagggcccagactacgtccttgtcgcctcggaccgggtg gccgccagcaatattgtccagatgaaggacgatcatgacaagatgtttaagatgagtgaa aaaatattacttctatgtgttggagaagctggagacactgtgcagtttgcagaatatatt caaaaaaatgtgcaactttataagatgcgaaatggctatgaattgtctcccacagcagca gcaaatttcacacggcgaaacctggctgactgtcttcggagtcggaccccatatcatgtg aacctcctcctggctggctatgatgaacatgaggggccagcactttactacatggactac ctggcagctttggccaaggccccttttgcagcccatggctatggtgccttcctgactctc agtatcctggaccgatactacacgcccactatctctcgtgatagggcagtggagctgctc aggaagtgtctggaggagctccaaaagcgcttcatcctgaatctgccgaccttcagtgtt cgaatcattgacaaagatggcatccatgacttggacaacatttccttccctaagcagggc tcctaa

Oryctolagus cuniculus (rabbit): 100349446 Help Entry 100349446         CDS       T03373                                  Name (RefSeq) proteasome subunit beta type-7   KO K02739   20S proteasome subunit beta 2 [EC:3.4.25.1] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03050   Proteasome ocu05010   Alzheimer disease ocu05012   Parkinson disease ocu05014   Amyotrophic lateral sclerosis ocu05016   Huntington disease ocu05017   Spinocerebellar ataxia ocu05020   Prion disease ocu05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03050 Proteasome     100349446  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     100349446    05012 Parkinson disease     100349446    05014 Amyotrophic lateral sclerosis     100349446    05016 Huntington disease     100349446    05017 Spinocerebellar ataxia     100349446    05020 Prion disease     100349446    05022 Pathways of neurodegeneration - multiple diseases     100349446  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ocu01002]     100349446   09182 Protein families: genetic information processing    03051 Proteasome [BR:ocu03051]     100349446 Enzymes [BR:ocu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.25  Threonine endopeptidases     3.4.25.1  proteasome endopeptidase complex      100349446 Peptidases and inhibitors [BR:ocu01002]  Threonine peptidases   Family T1: proteasome family    100349446 Proteasome [BR:ocu03051]  Eukaryotic proteasome   Core particles (20S proteasome)    beta type subunits     100349446 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Proteasome Pr_beta_C Motif Other DBs NCBI-GeneID:  100349446 NCBI-ProteinID:  XP_051696530 LinkDB All DBs Position 1:2895141..2962449 Genome browser AA seq 277 aa AA seqDB search MAAVSVYEPPVGGFSFENCRRNAVLEADFAKKGYKLPKARKTGTTIAGVVYKDGIVLGAD TRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV TANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAV FEDKFRPDMEEEEAKKLVSEAIAAGVFNDLGSGSNIDLCVISKSKLDFLRPYTVPNKKGT RSGRYRCEKGTTAVLSEKVTALEIEVLEETVQTMDTS NT seq 834 nt NT seq  +upstreamnt  +downstreamnt atggcggctgtgtcggtgtatgagccaccggttggaggcttctcttttgaaaactgtcgc aggaatgctgtcttggaagccgacttcgcaaagaaggggtacaagcttccaaaggcccgg aaaaccggcacgaccatcgcgggcgtggtgtacaaggatggcatagttcttggagcagac acaagggccaccgaagggatggtggttgctgacaagaactgctcaaaaatacacttcata tctcctaatatttattgttgtggtgctgggacagctgcagacacggacatgacaactcag ctcatctcttccaacttggagctccactccctgtccactggccgccttcccagagttgtg acggccaatcggatgctgaagcaaatgcttttcaggtatcaaggttacattggtgcagcc ctggttttaggaggagtagatgtcactggacctcatctctacagcatctatcctcatgga tctactgataagttgccttacgtcaccatgggttctggctccttggcagctatggctgtg tttgaagataagtttaggccagatatggaggaggaggaggccaagaagctggtgagtgaa gccattgcagctggcgtcttcaacgacctgggctccggcagcaacatcgacctctgtgtc atcagcaagagcaagctggatttcctccgcccgtacacagtgcccaacaagaaggggacc aggtctggccggtacaggtgtgagaaggggaccactgcggtcctctccgagaaggtcacc gcgctggaaatcgaggtgctggaggagaccgtgcagaccatggacacgtcctga

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