Oryctolagus cuniculus (rabbit): 100328710
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Entry
100328710 CDS
T03373
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100328710 (RBM39)
Spliceosome [BR:
ocu03041
]
Common components
Common spliceosomal components
General mRNP proteins
100328710 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
100328710
NCBI-ProteinID:
NP_001164806
Ensembl:
ENSOCUG00000007050
UniProt:
B7NZJ5
LinkDB
All DBs
Position
4:11758698..11792987
Genome browser
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccgtacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
aggagtcgtagtcatgaacggaagagaagcaaaagtaaggaacggaagagaagcagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
aggagtcgatcaagaagtcgagatcgcagattccgaggccgctacagaagcccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagagag
cctattgataatctaactcctgaggaaagagatgcacggacagttttctgcatgcaatta
gcagcaagaattcgaccacgggatttggaagaattcttctccacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggag
tttgtcgatgtgagctcagtgcctctagcaataggattaactggtcaacgagttttagga
gtgccaatcatagtacaggcatcacaggcggaaaagaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgagactttatgtgggctccctgcactttaac
ataacagaagacatgcttagggggatctttgagccctttggaaggattgaaagtatacag
ctcatgatggatagtgaaacaggtcgatcaaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgagctagcaggaagacca
atgaaagttggccatgttactgagcgaactgatgcttccagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacagcaggctctgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcctcagctttagctgctgctgcctctgttcagcca
cttgcaacacagtgtttccaactctctaacatgtttaacccgcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtg
attcatatttatgttgacaagaattcagctcagggcaatgtgtatgtgaaatgcccatca
attgctgcagctattgctgctgtgaatgcattgcatggcagatggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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