KEGG   Oryctolagus cuniculus (rabbit): 100328724
Entry
100328724         CDS       T03373                                 
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04625  C-type lectin receptor signaling pathway
ocu04668  TNF signaling pathway
ocu04917  Prolactin signaling pathway
ocu05133  Pertussis
ocu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    100328724 (IRF1)
 09150 Organismal Systems
  09152 Endocrine system
   04917 Prolactin signaling pathway
    100328724 (IRF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100328724 (IRF1)
  09171 Infectious disease: bacterial
   05133 Pertussis
    100328724 (IRF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100328724 (IRF1)
Transcription factors [BR:ocu03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100328724 (IRF1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 100328724
NCBI-ProteinID: NP_001164818
Ensembl: ENSOCUG00000004165
UniProt: B7NZL0
LinkDB
Position
3:complement(15484371..15490967)
AA seq 320 aa
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTRNQR
KERKSKSTRDAKGKAKRKSCGDSSPDTFSDGLSSSTLPDDHSGYTAQGYIGQDSEVEQAL
TPALSPHSTLPSWGDIVPDSTSDLYSFQVSPMPSASEAATDEDEEGKLPEDIMKLLEQPE
WQPTHVDGKGYLLNEPGAQATAVYGDFSCKEEPEVDSPGGDIGLSLHRVFTDLKNMDSSW
LDSLLPQVRLPSIQAIPCAP
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccag
atccccgggctgatctggattaataaagaggagatgatcttccagatcccgtggaagcac
gctgccaagcacggctgggacatcaacaaggacgcctgtctgttccggagctgggccatt
cacacaggccgatacaaagctggggaaaaggagccagatcccaagacgtggaaggccaac
ttccgctgtgccatgaactccctgccagacatcgaggaggtgaaggaccagagcaggaac
aagggcagctcggccgtgcgggtgtaccggatgctcccgcccctcaccaggaaccagagg
aaagagagaaagtccaagtccacccgagatgctaagggcaaggccaagaggaagtcctgt
ggggattccagcccagacaccttctctgatggactcagcagctccaccctgcctgatgac
cacagtggctacactgcccaaggctacattgggcaggactcggaagtggaacaggccctc
actccagcactgtcaccacatagcactctcccctcctggggggacatcgtgccggacagc
accagtgacctgtacagcttccaggtgtctcccatgccctccgcctctgaagctgcgaca
gatgaggatgaggaagggaaattaccggaggacatcatgaagctcttggagcagccagag
tggcagccgacacatgtggatgggaaggggtacctgctcaatgagcccggggcccaggcc
actgctgtctacggagatttcagctgcaaggaggagccagaagttgacagccctggaggg
gacattggtctgagcctacaccgcgtcttcacagatctcaagaacatggacagcagctgg
ttggacagcctgctgccccaagtcaggctgccttctatccaggccattccttgtgcaccg
tag

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