KEGG   Oryctolagus cuniculus (rabbit): 100328724
Entry
100328724         CDS       T03373                                 
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04625  C-type lectin receptor signaling pathway
ocu04668  TNF signaling pathway
ocu04917  Prolactin signaling pathway
ocu05133  Pertussis
ocu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    100328724 (IRF1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    100328724 (IRF1)
  09152 Endocrine system
   04917 Prolactin signaling pathway
    100328724 (IRF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100328724 (IRF1)
  09171 Infectious disease: bacterial
   05133 Pertussis
    100328724 (IRF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100328724 (IRF1)
Transcription factors [BR:ocu03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100328724 (IRF1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 100328724
NCBI-ProteinID: NP_001164818
Ensembl: ENSOCUG00000004165
UniProt: B7NZL0
LinkDB
Position
3:complement(15484371..15490967)
AA seq 320 aa
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTRNQR
KERKSKSTRDAKGKAKRKSCGDSSPDTFSDGLSSSTLPDDHSGYTAQGYIGQDSEVEQAL
TPALSPHSTLPSWGDIVPDSTSDLYSFQVSPMPSASEAATDEDEEGKLPEDIMKLLEQPE
WQPTHVDGKGYLLNEPGAQATAVYGDFSCKEEPEVDSPGGDIGLSLHRVFTDLKNMDSSW
LDSLLPQVRLPSIQAIPCAP
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccag
atccccgggctgatctggattaataaagaggagatgatcttccagatcccgtggaagcac
gctgccaagcacggctgggacatcaacaaggacgcctgtctgttccggagctgggccatt
cacacaggccgatacaaagctggggaaaaggagccagatcccaagacgtggaaggccaac
ttccgctgtgccatgaactccctgccagacatcgaggaggtgaaggaccagagcaggaac
aagggcagctcggccgtgcgggtgtaccggatgctcccgcccctcaccaggaaccagagg
aaagagagaaagtccaagtccacccgagatgctaagggcaaggccaagaggaagtcctgt
ggggattccagcccagacaccttctctgatggactcagcagctccaccctgcctgatgac
cacagtggctacactgcccaaggctacattgggcaggactcggaagtggaacaggccctc
actccagcactgtcaccacatagcactctcccctcctggggggacatcgtgccggacagc
accagtgacctgtacagcttccaggtgtctcccatgccctccgcctctgaagctgcgaca
gatgaggatgaggaagggaaattaccggaggacatcatgaagctcttggagcagccagag
tggcagccgacacatgtggatgggaaggggtacctgctcaatgagcccggggcccaggcc
actgctgtctacggagatttcagctgcaaggaggagccagaagttgacagccctggaggg
gacattggtctgagcctacaccgcgtcttcacagatctcaagaacatggacagcagctgg
ttggacagcctgctgccccaagtcaggctgccttctatccaggccattccttgtgcaccg
tag

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