Entry |
|
Symbol |
CNOT3
|
Name |
(RefSeq) CCR4-NOT transcription complex subunit 3
|
KO |
K12580 | CCR4-NOT transcription complex subunit 3 |
|
Organism |
ocu Oryctolagus cuniculus (rabbit)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ocu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100328776 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ocu03019]
100328776 (CNOT3)
Messenger RNA biogenesis [BR:ocu03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100328776 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100328776 (CNOT3)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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AA seq |
748 aa
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNQHPQSPAVPPTYSSGPPPAASALTAAPGNNGAPTPAAPASALGPKASPA
PSHNSGTPAPYAQAVAPSAPSGPSSAQPRPPSVQPSGGGGGGGSSGSNSSAGGGSGKQNG
ATSYSSVVADSPAEVALSSSGGSSASSQALGAPSGPHNPPPSTSKEPSAAAPAGAGGVAP
GSGNTSGGPSLLVPLPVNPPSSPTPSFSEAKAASALLNGPPQFTTAPEIKAPEPLSSLKS
MAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPV
PLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQR
LSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYI
YFDYEKWGQRKKEGFTFEYRYLEDRDLQ |
NT seq |
2247 nt +upstreamnt +downstreamnt
atggcggacaagcgcaaactccaaggtgagattgaccgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagacatctggcagaagctccacaacgcagccaacgcgaaccag
aaagaaaagtatgaggccgacctgaagaaggagattaagaagctgcaacggctaagggac
cagatcaagacatgggtggcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcatcgagacgcaaatggagcggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctgggcctggcccagaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccattgacaccctcaacatgcaggtggac
cagtttgagagtgaggtggagtccctgtccgtgcagacgcgcaagaagaagggcgacaag
gataagcaggaccggatcgagggcttgaagcggcacatcgagaagcaccgctaccacgtg
cgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgtggacgccatc
cgcaagatcaaggacgacgtggagtactacgtcgactcgtcccaggaccccgacttcgag
gagaacgagttcctgtacgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagcacg
cccacctcgaccacctccagctcgcccatcccgcccagcccggccaactgcaccacggag
aactcggaagacgataagaagaggggacgctcgacagatagtgaagtgagccagtctcca
gccaaaaacggctccaagcctgtccacagcaaccagcatcctcagtccccggctgtgccg
cccacctactcctccgggcccccgcctgctgcttctgccttgaccgctgcccctggcaac
aacggggcccccaccccagcagcacctgcaagtgccctgggtcccaaggccagtccagct
cccagccacaactcgggtactcccgccccctatgcccaggcagtggccccctcggccccc
agcgggcccagctccgcccagccccggccccccagtgtgcagccgagcgggggaggcggc
ggtggcggcagcagcggcagcaatagcagtgccggtggaggctctgggaagcagaacggc
gccaccagttatagctcagtcgtggcagacagcccagcagaggtggccctgagcagcagc
gggggcagcagtgccagcagccaggccctgggcgccccctcgggcccccacaacccaccg
cccagcacctcgaaggagcccagtgcagcagccccagcaggtgctgggggcgtggcccca
ggctcagggaacacctcggggggacccagcctcctggtgccactgcctgtgaaccccccc
agctccccgacgcccagcttcagtgaggccaaggcagccagtgcgctgctcaatgggccc
ccgcagttcaccaccgccccggaaatcaaggcccccgagcctctgagctccttgaagtcc
atggcggagcgggcggccatcagctctggcatcgaggaccctgtgccgacgctgcacctg
accgagcgagacatcatcctgagcagcacgtcggcgcctccagcctcggcccagccgccc
ctgcagctgtcggaggtgaacataccgctgtcgctgggcgtgtgtcccctggggcctgtg
cccctcaccaaggagcagctctaccagcaagccatggaggaggccgcctggcaccacatg
ccccacccctccgactcggagcgcatccggcagtacctccccaggaacccctgcccgacg
cccccctaccaccaccagatgccgcccccacactcagacaccgtggagttctaccagcgc
ctgtccacagagacgctcttcttcatcttctactacctggagggcactaaggcgcagtac
ctggcagccaaggccctgaagaagcagtcgtggcgattccacaccaagtacatgatgtgg
ttccagaggcacgaggagcccaagaccatcaccgacgagtttgagcagggcacctacatc
tactttgactacgagaagtggggccagcggaagaaggaaggcttcaccttcgagtaccgc
tacctggaggaccgggacctccagtga |