Oryctolagus cuniculus (rabbit): 100328931
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Entry
100328931 CDS
T03373
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha precursor
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04060
Cytokine-cytokine receptor interaction
ocu04061
Viral protein interaction with cytokine and cytokine receptor
ocu04064
NF-kappa B signaling pathway
ocu04668
TNF signaling pathway
ocu04940
Type I diabetes mellitus
ocu05166
Human T-cell leukemia virus 1 infection
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100328931 (LTA)
04668 TNF signaling pathway
100328931 (LTA)
09133 Signaling molecules and interaction
04061 Viral protein interaction with cytokine and cytokine receptor
100328931 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100328931 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
100328931 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocu04052
]
100328931 (LTA)
Cytokines and neuropeptides [BR:
ocu04052
]
Cytokines
Tumor necrosis fators
100328931 (LTA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
100328931
NCBI-ProteinID:
NP_001164590
Ensembl:
ENSOCUG00000006694
UniProt:
P10154
A0A0U5JXZ2
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Position
12:complement(135347605..135349795)
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AA seq
197 aa
AA seq
DB search
MTPPGRLYLPLLLGLLLAPPPPGAQGLPGAEFPPSAARNAQQRLQKHFGHSTLKPAAHLV
GDPSAQDSLRWRANTDRAFLRHGFSLSNNSLLVPSSGLYFVYSQVVFSGEGCSPKAVPTP
LYLAHEVQLFSSQYSFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTQGDQLSTHTDGI
AHLLLSPSSVFFGAFAL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacctggacgtctctacctccccctccttctggggctgctgctggccccgccg
ccgcctggggcccaggggctccctggggctgagttcccgccctcagctgcccggaatgcc
cagcagcgccttcagaaacatttcggccacagcaccctcaaacctgctgcgcacctcgtt
ggagaccccagcgcgcaggactcgctgcgctggagagcgaacacggatcgggccttcctc
cgccacggcttctccctgagcaacaattccctgctggtgcccagcagcgggctctacttc
gtgtactcgcaggtggttttctctggggaaggctgctcccccaaggccgtgcccacgcct
ctctacctggctcacgaggtccagctcttctcctcccagtactccttccatgtgcctctc
ctcagcgcccagaagtctgtgtgcccagggccgcagggaccctgggtgcgctccgtgtac
cagggggccgtgttcctgctcacccagggagaccagctgtccacccacacagatggcatc
gcccacctgctcctcagccccagtagtgtcttctttggagcctttgctctgtag
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