KEGG   Oryctolagus cuniculus (rabbit): 100328931
Entry
100328931         CDS       T03373                                 
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha precursor
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04060  Cytokine-cytokine receptor interaction
ocu04061  Viral protein interaction with cytokine and cytokine receptor
ocu04064  NF-kappa B signaling pathway
ocu04668  TNF signaling pathway
ocu04940  Type I diabetes mellitus
ocu05166  Human T-cell leukemia virus 1 infection
ocu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100328931 (LTA)
   04668 TNF signaling pathway
    100328931 (LTA)
  09133 Signaling molecules and interaction
   04061 Viral protein interaction with cytokine and cytokine receptor
    100328931 (LTA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100328931 (LTA)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100328931 (LTA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocu04052]
    100328931 (LTA)
Cytokines and neuropeptides [BR:ocu04052]
 Cytokines
  Tumor necrosis fators
   100328931 (LTA)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 100328931
NCBI-ProteinID: NP_001164590
Ensembl: ENSOCUG00000006694
UniProt: P10154 A0A0U5JXZ2
LinkDB
Position
12:complement(135347605..135349795)
AA seq 197 aa
MTPPGRLYLPLLLGLLLAPPPPGAQGLPGAEFPPSAARNAQQRLQKHFGHSTLKPAAHLV
GDPSAQDSLRWRANTDRAFLRHGFSLSNNSLLVPSSGLYFVYSQVVFSGEGCSPKAVPTP
LYLAHEVQLFSSQYSFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTQGDQLSTHTDGI
AHLLLSPSSVFFGAFAL
NT seq 594 nt   +upstreamnt  +downstreamnt
atgacaccacctggacgtctctacctccccctccttctggggctgctgctggccccgccg
ccgcctggggcccaggggctccctggggctgagttcccgccctcagctgcccggaatgcc
cagcagcgccttcagaaacatttcggccacagcaccctcaaacctgctgcgcacctcgtt
ggagaccccagcgcgcaggactcgctgcgctggagagcgaacacggatcgggccttcctc
cgccacggcttctccctgagcaacaattccctgctggtgcccagcagcgggctctacttc
gtgtactcgcaggtggttttctctggggaaggctgctcccccaaggccgtgcccacgcct
ctctacctggctcacgaggtccagctcttctcctcccagtactccttccatgtgcctctc
ctcagcgcccagaagtctgtgtgcccagggccgcagggaccctgggtgcgctccgtgtac
cagggggccgtgttcctgctcacccagggagaccagctgtccacccacacagatggcatc
gcccacctgctcctcagccccagtagtgtcttctttggagcctttgctctgtag

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