Oryctolagus cuniculus (rabbit): 100337818
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Entry
100337818 CDS
T03373
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100337818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100337818
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100337818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_22
ZER1-like_2nd
AAA_29
Motif
Other DBs
NCBI-GeneID:
100337818
NCBI-ProteinID:
XP_051713429
Ensembl:
ENSOCUG00000009797
LinkDB
All DBs
Position
13:70599757..70738055
Genome browser
AA seq
2262 aa
AA seq
DB search
MGFARQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKA
MPSAGLLPWLQGIFCNVNNPCFQSPTPGESPGTVSNYNNSILARVYRDFQDLLRDAPESQ
QLGRVWTELRTFFQLLETLRTHPERTAGRGIRVREILKDEEILVLFLKRNIGLSDSVVHL
LVNSQVRPEQFAHGVPDLALKDIACSEALLDRFLIFSQRRGAQTVRGALCSLSQGTLQWM
EDTLYANVDFFKLFRVLPTVLDSRSQGIDLRSWGRILSDMSPRIQEFAHRPSVQDLLWVT
RPLLQDGSPESFPRLMGALSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPVY
SYDKRTTPFCNALIQNLESSPLTKIAWRAAKPLLMGKILFTPNSPATRRILKNANSTFEE
LERLRNLVKAWEEIGPQIWYFFDKSPQMHMIRNTLRNPAVKGFLDRQLGEEGLAVEALLN
FLHNGPQESQADDTANFNWRDLFNVTDRTLHLVHQYLECLVLDKFESYDNEVQLTQRALS
LLEENRFWAGVVFPDMYPWTSSLPPHIKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
LRYIWGGFAYLQDMVEQGITRSQVPAGAPLGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTLFIM
HGRILHYSDPFILFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCF
AWQDRLTAELKKAASLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGNSPMEGDEFSFLLSM
KMMLFDAALYGLLAWYLDQVFPGDHGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPGGTNDSFFERELPGLVPGVCVKNLVKIFEPFGRPAVDHLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTAGTVLIGGKDIETSLDAIRRSLGMCPQHNILFHHLTV
AEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGEA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRPGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMRNIQSQGGGCEATCSCASKCISSRCPARTDEMTSEQA
LDGDVNELVDVVQHHVPEATLVECIGQELVFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDADSGLFAGGPLQKSAPVSLRHPCLGPSGKAEESAQATASEG
SPSPEPEGTGVPLNTGVRLILQHVQALLIKRFHHAIRSHKDFLAQIVLPATFVCLALMLS
IIVPPFGEYPALTLHPWMYGQQYTFFSMDEPGNERLATLADVLLNKPGFGNRCLKQEWLP
GYPCGNSTAWKTPSVSPNITHLFQQQIWTPDNPSPSCRCSTREKLTMLPECPRGAGGLPP
PQRTQRSTEILQDLTDRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPF
TGKALVAFLNDLGHLMNVSGGPVTRKATQEMSDFLKHLETEDNIKVWFNNKGWHALVSFL
NVAHNAILRASLPPDRNPEEYGVTVISQPLNLTKEQLSEVTVLTTSVDALVAICVIFAMS
FVPASFVLYLIQERVSKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAALVVGIFIGFQK
KAYTSPDNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITF
ILELFENNRTLLRFNALLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFGEEHSANPFQ
WDLLGKNLVAMAVEGVVYFLLTLLIQHHFFLTRWIAEPAKEPIVDEDDDVAEERQRIISG
GNKTDILKLNELTKIYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV
TSGDATVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAKEIGKVA
NWCIQSLGLSLYVDRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWN
TIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKI
RSPKDDVLPDLNPVEQFFQGNFPGSVQRERHYNMLQYQVSSSSLARIFQLLISHKDSLFI
EEYSVTQTTLDQVFVNFAKQQTETHDLPLHPRAAGANQQVKV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgccaggcagatacagctcttgctctggaagaactggaccctgcggaagagg
caaaagattcgctttgtggtggaacttgtgtggcctttatccttatttctggtcttgatc
tggttaaggaacgccaaccctctctacagccaacacgaatgccattttcccaataaagcg
atgccctcggcaggactgttgccgtggctccaggggattttctgcaatgtgaacaatcct
tgttttcagagccccaccccgggagaatctcctggaaccgtgtccaactacaacaactcc
atcttggcaagggtgtatcgagattttcaagacctcctcagggacgcaccggagagccag
caacttggccgtgtttggacagagctccgcacctttttccaactcctggaaactctgagg
actcacccggagagaactgcaggaagaggaatacgagttcgggagatcctgaaagacgaa
gagatcctggtgctatttctcaagagaaacattggcctgtctgactcggtggtccacctt
ctggtcaattcccaagtccgcccggagcagtttgctcatggagtcccggacctggcgctg
aaggacatcgcctgcagcgaggccctcctggaccgcttcctcatcttcagccagcgacgt
ggggcgcagaccgtgcgtggtgccctgtgctccctctcccagggcaccctgcagtggatg
gaggacaccctctatgccaacgtggacttcttcaagctcttccgcgtgcttcccacagtc
ctagacagcagatctcaaggtatcgatctgagatcctggggaagaatattatcagacatg
tcaccgagaattcaagaattcgcccatcggccgagtgttcaggacttgctgtgggtgacc
agacctctgctgcaggacggcagcccggagagcttcccacggctgatgggcgcgctgtcc
gacctgctgtgtggctacccggagggaggaggctcgcgggtgttctccttcaactggtat
gaagacaataactataaggccttcctggggatcgactccacgaggaaagaccctgtctat
tcttacgacaagagaacaacacccttttgtaacgcgttgatccagaacctggagtccagc
cctctaaccaaaatagcctggagggccgcaaagcctctgctgatgggaaaaatcctcttt
actcccaattcccctgcaacacgaaggatactgaagaatgccaactcgacttttgaagag
ctggagcgccttaggaatctggtgaaagcctgggaagaaatagggccccagatctggtac
ttctttgacaagagcccacagatgcacatgatcaggaataccctgaggaacccagcggtg
aaaggttttctggacaggcagcttggtgaggaaggccttgctgttgaagccctgctgaac
ttcctgcataacggtcctcaagagagccaggccgacgacacggccaacttcaactggagg
gacctgttcaacgtcactgatcgcacactacacctggtgcaccaatacctggagtgcttg
gtcctggacaagtttgaaagctacgacaatgaagttcagctcacccaacgggccctgtct
ctgctggaggagaacaggttctgggctggcgtggtgttcccggacatgtatccctggacc
agctccctgccaccccacatcaagtacaagatccggatggacattgatgtggtggagaaa
accaataagatcaaagacaggtactgggattctggccccagggctgatcctgtggaagat
ttgcggtacatctggggaggctttgcctatctgcaggacatggttgaacagggaatcaca
aggagccaggtccccgctggagctccacttgggatctacctgcagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcatggatttactcagtctccatgacggtaaagggcattgtcttggaaaaggagttg
agactgaaggagaccttgaaaaatcagggcgtctccaatgcagtgatttggtgtacctgg
ttcctggacagcttctccatcatgtcaatgagcatcttcctcctgacgctattcatcatg
catgggagaatcctccactacagcgatccgttcatcctgttcctgttcctgttggctttc
tccacggccaccatcatgcagtgcttcctgctcagcaccttcttctccaaagccagcctg
gcagcagcctgcagcggcgtcatctacttcacgctctacctgccccacatcctgtgcttc
gcctggcaggaccggctgactgccgagctgaagaaggctgcgagcctgctgtctcctgta
gcctttgggtttggcactgagtacctggttcgctttgaagagcaaggcctggggctacag
tggagcaacattggcaacagccccatggaaggggatgaattcagcttcctgctgtccatg
aagatgatgctctttgatgctgctctctacggcttgcttgcctggtacctggaccaggtg
ttcccaggggaccacggaaccccacttccttggtacttcctcctacaagagtcttactgg
ctcggtggtgaagggtgttcaaccagagaagaacgggccctggaaaagactgagcccata
acagaggagatggaggacccggaacaccccggaggaacaaacgactccttctttgaacgt
gaactcccggggttggttcctggggtatgtgtgaagaatctggtgaagatttttgagccc
tttggccggccggccgtggaccaccttaacattaccttctatgagaaccagatcaccgcc
ttccttggtcacaacggcgccgggaagaccaccaccctgtccatcctaacgggtctgttg
ccgccgacagcaggcacagtgctcatcggaggaaaggacattgaaaccagcctggatgcc
atccggcggagcctcggcatgtgcccccagcacaacatcctcttccaccacctcacggtg
gcagagcacatcctgttctacgcccagctgaaagggaggtcctgggaggaggcccagctg
gagatggaagccatgctggaggacacgggcctccaccacaagaggaacgaggaagctcag
gatctctcaggcggcatgcagaggaagctgtcggtcgccatcgcgtttgtgggagaggcc
aaggtggtcgtcctggatgaacccacctcgggggtggatccctactccagacgctccatc
tgggacctgctcctgaagtaccgcccaggcagaaccatcatcatgtccactcaccacatg
gacgaggctgacctgctcggggaccgcatcgccatcatctcccagggaaggctctactgc
tcgggcacccccctcttcctgaagaactgctttggcacgggcttctacttgaccttggtg
cgcaagatgagaaacatccagagccaaggaggaggctgtgaggcgacctgcagctgtgca
tccaagtgcatctccagcaggtgtccagcacgcactgatgagatgacctcggagcaagcc
ttggacggggatgtgaacgagctggtggatgtggttcaacaccacgttccagaggccacg
ctggtggagtgcatcgggcaagaactggtcttccttcttccaaacaagaatttcaagcag
agagcgtacgccagccttttccgggagctggaggagacgctggctgacctggggctcagc
agttttggaatttctgacactcccctggaagagattttcctgaaggttacggaagatgct
gattcgggcctgtttgctggtggccctctgcagaaaagtgcgcccgtcagcctgcgtcac
ccctgtttgggtcccagcgggaaggctgaagagtctgcccaggccactgcctccgagggc
tcgccctccccagagcccgagggcacaggcgtcccgctcaacacgggcgtgaggctcatc
ctccaacacgtgcaggcgctgctgatcaagcgcttccaccacgccatccgcagccacaag
gacttcctggcccagatcgtgctcccggccacgtttgtgtgtctggctctgatgctttcc
atcatcgtgcctccttttggtgaatatcccgccttgacccttcacccctggatgtatggg
cagcagtacaccttcttcagcatggacgagcctggcaacgagcgcctcgccaccctggca
gacgtcctcctgaacaagccgggctttggcaatcgctgcctgaagcaagagtggcttccg
gggtacccctgtggcaactcgaccgcctggaagactccctctgtgtccccaaacatcacc
cacctattccagcagcagatatggacgccggacaacccctcgccctcctgcaggtgcagc
accagggagaagctcaccatgttgcccgagtgccccaggggcgccgggggactcccgccc
ccgcagaggacacagcgcagcaccgaaatcctgcaggaccttacagacaggaacatctcc
gactacctggtgaagacgtaccctgctctcataagaagcagcttaaagagcaaattctgg
gtcaacgaacagaggtacggaggaatttccatcggagggaagctcccagccatccccttc
accgggaaagcacttgttgcttttctcaacgaccttggccacctaatgaacgtgagcggg
ggccctgtcaccagaaaggctactcaagaaatgtctgatttcctgaaacatctggaaacg
gaagacaacattaaggtgtggttcaacaacaaaggctggcacgccctggtcagctttctg
aacgtggcccacaacgccatcctccgggccagcctgcccccggacaggaacccagaagag
tatggagtcaccgtcataagccagccgctgaacctgaccaaggagcagctctcagaggtt
acagtgctgaccacttcggtggatgccctggttgccatctgcgtgattttcgccatgtcc
ttcgtcccagccagctttgtcctttatttgatccaggagagggtgagcaaagccaagcac
ctgcagtttatcagcggcgtgagccccaccacctactggctgaccaacttcctctgggac
attatgaattacgctgtgagcgccgccctggtggtgggcatcttcatcgggtttcagaag
aaagcctatacttccccagataatcttcctgcccttgttgcgctactcatgctgtacggg
tgggcagtcattcccatgatgtacccggcgtctttcctctttgatgtccccagcacagct
tacgtggctttgtcctgtgcgaatctgttcatcggcatcaacagcagtgccatcaccttc
attctggaactatttgagaataaccggacgctgctcagattcaacgccttgctgaggaag
ctgctcatcatcttcccccacttctgcctgggccggggcctcattgacctggcactgagc
caggctgtgacggacgtctatgcccggtttggggaggagcactctgcgaatccgttccag
tgggacctgcttgggaagaacctggttgccatggcagtagaaggggtcgtgtacttcctc
ctgacactcctcatccagcaccacttcttcctcacccgctggattgctgagcctgctaag
gagcccattgtcgatgaagatgatgatgtggctgaagaaagacaaagaatcattagcggg
ggaaataaaaccgatatcttaaagttaaatgagctaaccaagatttactcaggcacctcg
agcccggcagtggacaggctgtgtgtcggagtccgccctggagagtgctttggcctcttg
ggagtaaatggtgctggtaaaacaaccaccttcaagatgctcacaggggacactacggtg
acctcgggtgatgccacggtagcaggcaagagtattttaaccaacatttcagacgtccac
caaagtatgggctactgtccgcagtttgatgcgattgatgacctgctcacggggcgagaa
cacctttacctttatgcccgacttcgaggggtaccagccaaggaaatcgggaaggttgca
aactggtgtattcaaagcctgggcctgtccctctacgtggaccgcctggctggcacatac
agcgggggcaacaagcggaagctctccacagccatcgcactcattggctgcccgccgctg
gtgctgctggatgagcccaccacagggatggacccccaggcacgccgcatgctgtggaac
accattgtgagcatcatcagagaaggaagagctgtggtcctcacatcccacagcatggaa
gagtgtgaggcactgtgtacccggctggccatcatggtgaagggcacctttcagtgtctg
ggcaccattcagcacctcaagtacaagtttggagatggctacattgtcacaatgaaaatc
agatccccgaaggatgacgtgcttcctgacctgaatcccgtggagcagttcttccagggg
aacttcccaggcagtgtgcagagggagaggcactacaacatgctccagtaccaggtctcc
tcctcctccctggccaggatcttccagctgctcatctcccacaaggacagcctgttcatt
gaggagtactcggtcactcagaccacgctggaccaggtatttgtgaactttgctaagcag
cagactgaaactcatgaccttcctttgcatcctcgtgctgccggagccaaccaacaagtc
aaggtctga
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integrated database retrieval system
