Oryctolagus cuniculus (rabbit): 100337892
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Entry
100337892 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100337892
03009 Ribosome biogenesis [BR:
ocu03009
]
100337892
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100337892
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100337892
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
Helicases
100337892
Pre-60S particles
100337892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
100337892
NCBI-ProteinID:
XP_008256710
Ensembl:
ENSOCUG00000012586
UniProt:
G1U642
LinkDB
All DBs
Position
7:108351527..108367973
Genome browser
AA seq
756 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQARVSDVSLSEPQNGDVPDAAVAGGKVKKSLKH
ATSVSLSEPQNGDVPDAAVAGGKAKKSLKRATSVGLSETQNGDVPDTAVAGGKAKKSLKR
ATSVGLSEPQNGDVPEAAVAGGKAKKSLKHTMSVGLSETQNRALTKETVKKVKVKKSPQK
SAVLTNGEAATESPDPESKKKKKKKKRKLVNGAGPDTKKAKIQEEGTKAPTETEDSVEAA
DNEEDDSEAPSLPLGLTGAFEDTSFDSLTNLVNENTLKAIKEMGFTNMTEIQHKSVRPLL
EGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKEL
MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDE
ADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN
ATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLA
IHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVG
RTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYF
LHKSAQEAYKSYIRAYDSHSLKQIFNVNSLNLPQVALSFGFKVPPFVDLNVNSNEGKQRK
RGGGGGFGYQKTKKVEKSIIFKHISKKPTDRRQFSH
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctgccgatgaaactgctgcgcaagaagatcgagaagcggaacctcaagttg
cggcagcgaaacctcaaactccaggcaagggtctcagatgtgagcctgtcagaaccccag
aatggagacgtgcctgacgcagcagtggcaggtgggaaagtgaagaagtccctgaaacac
gccacgagtgtgagcctgtcagaaccccagaatggagacgtgcctgacgcagcagtggca
ggtgggaaagcgaagaagtccctgaaacgtgccacgagtgtgggcctgtcagaaacccag
aatggagacgtgcctgacacagcagtggcaggtgggaaagcgaagaagtccctgaaacgt
gccacgagtgtgggcctgtcagaaccccagaatggagacgtgcctgaagcagcagtggca
ggtgggaaagctaagaagtccctgaaacacaccatgagtgtgggcctgtcagaaacacag
aatagagccttgactaaagaaacagtgaagaaagtaaaagttaaaaaatccccccagaaa
tctgctgtgttaaccaatggagaagcagcaacagagtcgcccgatccagaatctaaaaag
aagaagaagaagaaaaagagaaaactggtgaatggtgctggccctgataccaaaaaagca
aaaattcaagaagaaggcaccaaggctcctacagaaacagaagacagtgtggaagcagca
gacaatgaggaggatgacagtgaggctcccagcctgccccttggactgacaggagctttt
gaagatacttcatttgattctctaactaatcttgtcaatgaaaacactctgaaggcaata
aaagaaatgggctttacaaacatgactgaaattcaacataaaagcgtcagaccacttctg
gaaggcagagatcttctagcagctgcaaaaacaggcagtggcaaaaccctggcgtttctc
atccctgcagttgaacttattgttaagttaaagtttatgcccaggaatgggacaggagtc
cttattctctcacctactagagaactggccatgcagacgtttggtgttctcaaggagctg
atgactcaccacgttcacacatatggcttgataatgggtggcagtaacagatctgctgaa
gcacagaagcttgccaatgggatcaacatcattgtggctacgcctggccggctcctggac
catatgcagaatactccagggtttatgtacaaaaacctacagtgtctggttattgatgag
gctgatcgcatcttggatgttggatttgaagaggaattgaaacaaattattaaacttttg
ccaacacgcagacagaccatgctcttttctgccacacaaactcgaaaagttgaagatctg
gcaaggatttctctgaaaaaggagcctttgtatgttggtgttgatgacgataaagctaat
gcaacagtggatggtcttgagcagggatatgtggtttgtccctcagaaaagagattcctt
ctgctctttacattccttaagaagaaccgaaagaagaaactgatggtcttcttttcatct
tgtatgtccgtgaaataccactatgagctgctgaactacattgatttgcctgtcttagct
atccacggaaagcagaagcaaaataaacgtacaaccacattcttccagttctgtaacgca
gactccgggatattgctatgtacagatgtggcagcaagagggctggatattcctgaagtt
gactggattgttcagtatgaccctccagatgaccctaaggaatatattcaccgcgtaggt
agaacagccaggggcctaaatggacgagggcatgccttgctcattttgcgcccagaagaa
ctgggtttccttcgttacttgaagcagtctaaggttccattaagtgaatttgacttttct
tggtctaaaatttctgacattcagtctcagcttgagaagttgattgagaagaattacttt
cttcataagtcagcccaggaagcatacaagtcgtacatccgagcttatgattcccattct
ctgaaacagatctttaatgttaatagcttaaatttgcctcaggttgcactgtcttttggt
ttcaaggtgcctccctttgttgatctgaatgtgaacagcaacgaaggcaagcaaagaaaa
agaggaggcggcggtggcttcggctatcagaaaaccaagaaagttgagaagtccataatc
ttcaagcacattagcaagaaaccgaccgaccgccggcagttctctcactga
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