Oryctolagus cuniculus (rabbit): 100338178
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Entry
100338178 CDS
T03373
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04142
Lysosome
ocu04144
Endocytosis
ocu04721
Synaptic vesicle cycle
ocu04961
Endocrine and other factor-regulated calcium reabsorption
ocu05016
Huntington disease
ocu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100338178
04142 Lysosome
100338178
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100338178
09156 Nervous system
04721 Synaptic vesicle cycle
100338178
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100338178
09164 Neurodegenerative disease
05016 Huntington disease
100338178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100338178
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100338178
Exosome [BR:
ocu04147
]
Exosomal proteins
Proteins found in most exosomes
100338178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
100338178
NCBI-ProteinID:
XP_008269419
Ensembl:
ENSOCUG00000016413
UniProt:
A0A5F9DCD4
LinkDB
All DBs
Position
19:complement(26227499..26308582)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMT
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattcttccaattcgttttcaggagcatctccagctccagaacctgggaatc
aacccagcgaacattggcttcagtaccctaactatggaatcagacaaatttatctgcatt
agagaaaaagtaggcgagcaagcccaggtggtaatcattgatatgaatgacccaagtaat
cccattcgaagaccaatttcagcagacagtgccatcatgaatccagctagcaaagtaatt
gcattgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gctcatactatgactgatgatgtcaccttttggaaatggatctctttgaatacggttgcg
cttgttacggataatgcagtttatcattggagtatggaaggcgagtctcagccagtgaaa
atgtttgatcgtcattctagccttgcagggtgccagattatcaattatcgtacagatgca
aagcaaaagtggttacttctgactggcatatccgcacagcaaaatcgtgtggtgggagct
atgcagctgtattctgtagataggaaagtatctcagcctattgaaggacatgcagctagc
tttgcacagtttaaaatggaaggaaatgcagaagaatcaacattgttttgttttgcagta
cgtggtcaagctggagggaagttacatatcattgaagttggcacacctcctacaggaaac
cagccatttccaaagaaggcagtggatgtttttttccctccagaagcgcaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtggtattcttgattactaagtatggc
tatattcatctctatgatcttgagactggtacctgtatctacatgaatagaatcagtgga
gaaacaatctttgttactgcacctcacgaagccacagctggaataattggagtaaacaga
aagggacaagttctgtcagtgtgtgtggaagaagaaaacatcattccttatatcaccaat
gtcctacaaaatcctgatttggccttgagaatggctgtccgtaacaacctagctggtgct
gaagaactctttgctcggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtggctgctaatgcaccaaagggaatcttgcgtactccagacaccattcgtcgg
ttccagagtgtcccagcccagccaggtcagacttctcctctacttcagtactttggaatc
cttttggaccagggacagctaaacaagtatgaatctttagagctgtgtagacctgtactt
caacaaggtcggaaacaacttttggagaaatggttaaaagaagataagctggagtgttct
gaagaactgggtgatcttgtgaaatctgtggaccctactttggcacttagtgtttacctg
agggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggacaagtccagaag
attgtgttatatgctaaaaaggttggatataccccagactggatctttttgctgagaaat
gtaatgcgcatcagtccagatcagggacagcagtttgcacagatgttagtgcaggatgag
gagcctcttgctgatatcacacagattgtagacgtctttatggaatacaatctcattcaa
caatgtactgcgttcttgcttgatgctctgaagaacaatcgcccgtctgaaggtccttta
cagacacgattgctcgagatgaaccttatgcatgcacctcaagttgcagatgctatccta
gggaatcagatgttcacgcattatgaccgagctcatattgctcagttgtgtgaaaaggct
ggcctgctgcagcgtgcgttggagcacttcactgatctgtatgacataaagcgtgcagtt
gttcacacccatcttcttaaccctgagtggttagtgaattactttgggtccttatcagta
gaagactccctagaatgtctcagagccatgctgtctgctaatattcgtcagaatctacag
atctgtgttcaggtggcttctaagtatcatgaacagctatcaactcaatctctgattgaa
ctttttgaatcattcaagagctttgaaggtctcttttattttctgggatccattgttaac
tttagccaggacccagatgtacactttaagtatattcaggcagcttgcaagactgggcaa
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaaa
aattttctcaaggaagcaaaactaacagatcaattaccccttatcattgtgtgtgatcga
tttgattttgtccatgatttggtgctttatttatacagaaataatcttcaaaagtatata
gagatatatgtgcagaaggtgaatccaagtcgacttcctgtggttattggaggattactt
gatgttgactgctctgaggatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgccgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctagaagccagaattcatgaaggctgtgaagagcctgctactcacaatgcgttagcc
aaaatctacatagacagtaataacaaccccgagagatttcttcgtgaaaatccctattat
gacagtcgtgttgtgggaaagtattgtgagaagagagacccgcatctggcctgtgttgct
tatgaacgtggccagtgtgatctggagcttattaatgtttgcaatgagaattctctcttc
aaaagcctttcccgctacctggtacgtcgaaaggatccagaattgtggggtagtgtgcta
ttggaaagcaatccttacaggaggcctctgattgaccaggttgtgcagacagctttgtca
gaaactcaagaccctgaagaagtgtcagtaactgttaaggctttcatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatttgcaaaatctcctcattctcactgcaattaaggctgaccgtacacgtgtt
atggagtatattaaccgcctggataattatgatgctccagatattgccaatattgccatc
agcaatgagctctttgaagaagcatttgctattttccggaaatttgatgtcaatacttca
gcagtgcaggtcttgattgaacatattggaaacttggaccgggcatatgagtttgctgaa
cgctgcaatgaacctgcggtctggagtcaacttgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcttacattaaagctgatgatccttcatcatacatggaagtc
gttcaggctgccaatactagtggaaactgggaagagctggtgaagtacttgcagatggcc
cgtaaaaaggcccgagagtcttatgtggagacggagttgatatttgcactggccaaaact
aaccgtctcgcggagttagaagagttcatcaatgggccaaacaatgctcacatccagcaa
gttggtgatcgttgttatgatgaaaaaatgtatgatgctgctaagttgttatacaacaat
gtttctaattttggacgcttagcatccactctggttcacctaggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgctttgcctgt
gtagatgggaaagagttccgtcttgctcaaatgtgtggactccatattgttgtacatgca
gatgaattagaggaactgatcaactactatcaggatcgaggctattttgaagaactgata
accatgttggaagcagcactgggacttgagcgagctcacatgggaatgtttactgaatta
gctattctgtattctaaatttaagccacagaaaatgagggaacacctggagcttttctgg
tccagagtgaacattcctaaggtgctaagagctgcagaacaagcccacctttgggcagaa
ctggtatttttgtatgacaagtatgaagaatatgataatgccataattaccatgatgact
catccaactgatgcatggaaagaaggacagttcaaagatatcattaccaaggttgccaat
gtggagctctactacagagcaatacagttctacttagaattcaaacctctcttgttaaat
gatttgttgatggtgctgtctccacggctggatcacactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttgcgttccgttcagaaccacaacaac
aaatctgtgaatgagtcattgaataacctcttcattactgaagaggattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatttcacttgctcagcgtttggaa
aaacacgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagcgtagagctgtgcaagaaagacagcctttacaaggatgcaatgcagtat
gcctctgaatctaaggatactgagctggccgaagaacttctacagtggtttttgcaggaa
gaaaaaagagaatgctttggagcttgtctcttcacttgttacgatcttttaaggccagat
gttgtcctggaaaccgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacttgacaaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagaatcattgagaaaagaagaagaacaagctacagagacacaacccattgtt
tatggtcagccccaactgatgctgacagcaggacccagtgttgcagttcctccccaggca
ccttttggttatggttatactgcaccaccctatgggcagcctcagcctggctttgggtac
agcatgtga
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integrated database retrieval system
