Oryctolagus cuniculus (rabbit): 100338183
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Entry
100338183 CDS
T03373
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04136
Autophagy - other
ocu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100338183
04136 Autophagy - other
100338183
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocu01002
]
100338183
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338183
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100338183
Peptidases and inhibitors [BR:
ocu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100338183
Membrane trafficking [BR:
ocu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100338183
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100338183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
100338183
NCBI-ProteinID:
XP_008271081
Ensembl:
ENSOCUG00000010839
UniProt:
A0A5F9CKN1
LinkDB
All DBs
Position
X:56698070..56765343
Genome browser
AA seq
402 aa
AA seq
DB search
MESTGSAVLSKYENQITIFTDYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLWFT
YRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQPKEYQRILQ
CFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNT
VVIEDIKKMCCVLPLSANTPGERLHDSLTASNQSKGTSACCPAWKPLLLIVPLRLGINQI
NPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIFLDPHTTQTFVDTEENGTVD
DQTFHCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHP
SHWPPFVPPAKPEVTTTGAEFIDSTEQLEELDLEEDFEILSV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagagcactggatccgcagttttgtccaagtatgaaaaccagattactattttcact
gactacctagaagaatttccagatacagatgagctggtatggatcttggggaagcagcat
ctccttaaaacagaaaaatctaagctgttgtctgatataagtgctcgtctatggtttaca
tacagaaggaaattttcaccaattgggggaacaggcccttcatctgatgctggctggggt
tgtatgctgcgttgtggacagatgatgctggctcaagcccttatctgtagacacttggga
agggactggaactgggagaaacaaaaagaacaacccaaagaataccaacgaatcctacag
tgcttcttagatagaaaagactgttgctactctattcatcaaatggcacaaatgggtgta
ggagaagggaaatcaattggcgaatggtttggaccaaatacagttgcacaggtgttaaaa
aaacttgctttatttgatgaatggaattccttggctgtttatgtttcaatggataataca
gtggtcattgaagacatcaaaaaaatgtgctgtgtccttcccttgagtgccaacacacct
ggtgaaaggctccatgattctctgactgcttcgaaccagagtaagggcacctctgcctgc
tgcccagcctggaaacccctgctgctcattgtgcccctccggctgggcataaaccaaatc
aatcctgtctatgttgatgcattcaaagagtgttttaagatgccacagtctttaggggca
ttaggaggaaaaccaaataacgcctattatttcataggattcttaggtaatgagctcatc
ttcttggaccctcatacaacccagacctttgtcgacactgaagagaacggaacggttgat
gaccagactttccactgcctgcagtccccacagcgaatgaacattctgaacttggatcct
tctgtggcattgggatttttctgcaaagaagaaaaagactttgataactggtgtagcctt
gttcagaaggaaattctaaaggagaatttaaggatgtttgaattagttcagaagcatcca
tcacactggcctccctttgtacctccagccaaaccagaagtgacaaccactggggcagaa
ttcatcgactctactgaacaactggaggagttggacctggaggaagattttgagattctg
agtgtgtag
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