Oryctolagus cuniculus (rabbit): 100338329
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Entry
100338329 CDS
T03373
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338329
Membrane trafficking [BR:
ocu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100338329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
MAS20
PPR_3
SPA
Motif
Other DBs
NCBI-GeneID:
100338329
NCBI-ProteinID:
XP_002715530
Ensembl:
ENSOCUG00000011771
LinkDB
All DBs
Position
13:38860064..38875935
Genome browser
AA seq
1501 aa
AA seq
DB search
MEADAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPIPEEARVPEPSGPLRPPRPAEPITD
VAVIARALGEEVPQGYTCIQTSAGGHPLELSAGLLGGTQPVICYRRGRDKPPLVELGVLY
EGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLP
SKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKGNTLVYEAELLGRYPEEDNEAFPL
PESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFPRARLSE
RQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAFLTFLYRYSVSGPHRLP
LEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPEL
AVTLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPV
PFIVGIHSSYFDLHDPPADVICVDLDTNTLFQTEEKKPLSPRTLPRRPYKVLLATLTNLY
QQLDQTYTGPEQEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYREFLRPLT
QAPSEGARDVDNLFHLQGFLKSRERSSHKLYSQLLHTQMFSQFIEECSFGSARHAALEFF
DSCVDKVHAEQERPEPTPLVELEELSGSELTVFITPPEEPPVPDSSEPIPQFCYDGFPEL
RAELFESPQEQPGALPVPGTSRSAPSSPAPRRTKQEMKVAQRMAQKSATVPELWARCLLG
HCYGLWFLCLPAYVRSAPSRVRALHTAYQVLRQMESRKVVLPDEVCYRVLMQLCSHYGQP
VLSVRVMLEMRRAGIVPNTITYGYYNKAVLESKWPSGTPGGRLRWAKLRNVVLGAAQFRQ
PLKERRRQQQQQQQQPAAQQEAGSSQTEPCLERPSPTRPLQRQTTWAGRSLRDPASPAGR
LVKSGSLGSARGAQPTVEAGVAHMIEALGVLEPRGSPVPWHDGSLSDLSLTGEELAPGGS
PGGSGPALSAQSTEALEGLSGRGPKAAGHQEEAGTPRRGLGARLQQLLTPSRRSPASRIP
PPELPADLPPPARRSPMDSLLHPRERPGSTASESSASLGSEWDLSESSLSSLSLRRSSER
LSDTPGSSQPPSLEILLSSCSLCRACDSLVYDEEIMAGWAPDDSNLNTTCPFCACPFVPL
LSVQTLDSRPSAPSPKPTPAGASGSRDAPVPGGPGPVLSDRRLCLALDEPQLCNGHMGGT
SRRVESGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAHPIIFWNLLWYFQRLGLPS
ILPGLVLASCDGPPAPQAPPPWLTSDPASVQVRLLWDILTPDPNSCPPLYVLWRVHSQIP
QRVMWPGPVPASLSLALLESVLRHVGLNEVHKAVGLLLETLGPPPTGLHLQRGIYREILF
LTMAALGKDHVDIGAFDKKYKSAFNKLASSMGKEELRQRRAQMPTPKAIDCRKCFGAPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatgcagtgagtgaggggggggccatggcagaggagcggcccccccggctg
gtggattacttcgtggtagctgggctcgcagggaacggagcacccatccccgaggaagca
cgggttcctgaacccagcggtcccctgcgccctccccggcctgctgagcccatcacagat
gtggcagtcatcgctagggccctgggcgaggaggtgccccagggctacacctgcatccag
acttctgctggaggccaccccttggaactcagtgccgggctcctgggtggaactcagccc
gtcatctgctaccgcaggggccgtgacaagccccccctcgttgagctgggggtgttgtat
gaggggaaggaacggcccaagcctggcttccaagtgctggacacaacaccctacagccac
tcagccaacctggcccctccaggccccgggcacccccgcacctacctcacttaccggcgg
gcagcagagggggcagggctgcacgccctgggcatcactgacctctgtctggtgctgccc
agcaagggtgagggcactccccacacgtactgccggctgccacgcaacctcaaccctggc
atgtggggcccagcggtgtatctgtgctacaaggtgggcctagccaagggcaacacgttg
gtgtacgaggcagagctgttgggccgctacccggaggaggacaacgaggcgttcccgctg
cccgagtccgtgccagtcttctgcctgcccatgggtgccactatcgagtgctggcctgcc
cagaccaagtaccccgtgcccgtcttctccaccttcgtgctcacgggtgccgctggtgat
aaggtgtatggtgccgccctgcagttctatgaggcgttcccgagggccaggctgtcggag
cggcaggcacgggcgctgggcctgctgagtgccgtggagcggggccgggcgctgggcggc
cgagctgtacgcagccggcgagccatcgccgtgctgtcccgctggcccgccttccctgca
tttcgcgccttcctcaccttcctctaccgctactccgtctcaggcccccaccgcctgccc
ttggaagcgcacatctcgcacttcattcacaacgtccccttcccctccccacagagaccc
cgcatcctagtgcagatgtctccctacgacaacctgctcctctgtcaacctgtgtcttca
cccctgcccctcagcggtgccagcttcctgcagctgctgcagagcctgggccctgagctg
gctgtcacactgctgctggccgtgctcacggagcacaaactgctggtgcactcgctgcgg
ccagacctgctcaccagtgtctgtgaggcccttgtctcgatgatctttccgctgcactgg
cagtgcccctacattccgctgtgccccctggtgctggcagacgtgctgagcgcccctgtg
cccttcatcgtgggcatccactccagctactttgatctgcatgaccccccggccgacgtc
atctgtgtcgaccttgacaccaacacgctcttccagaccgaggaaaagaagcccctctcc
cctcggaccctgcctcgcagaccctacaaggttctgctggccactctgactaacctgtac
cagcagctggaccagacatacactggacccgagcaggaggcctccctggaattcctgctg
accgactacgaggcagtgtgcggccgccgggcccggctggagcgagaggtccagggtgcc
ttcctccgcttcatggcctgcctgctcaagggctaccgggaattcctgcgcccactcacc
caggccccctcggagggcgctcgcgacgtggacaaccttttccaccttcagggcttcctg
aagtcccgcgagcgctctagccacaagctgtactcccagctgctgcacacacagatgttc
tcccagttcattgaggagtgctctttcggctctgctcggcatgctgccttggaattcttt
gactcctgcgtcgacaaggtccacgccgagcaggaaaggcctgagcccactccgttggtg
gagctggaagagttgtcgggaagtgagctcaccgtcttcatcacgcctcccgaggagccc
ccggtcccagacagcagcgaacccattccccagttctgttacgatgggttcccagaacta
cgggctgagctgtttgaatctccccaagagcaacctggggcactgcctgtgccgggcacc
tcccggagtgcccccagcagtcctgcccctcgcagaaccaaacaggagatgaaggttgca
cagcggatggcacagaagtcagcgaccgtgcctgagctgtgggcccggtgcctgctgggg
cactgctacgggctgtggttcctgtgcctgcctgcctacgtacgatcggcaccctcccgg
gtacgggcactgcacacggcctaccaagtgctacgccagatggagagccgcaaagtggtg
ctccccgacgaggtgtgttaccgggtgctgatgcagctctgctcacactatgggcagcct
gtgctgtctgtgcgggtcatgctggagatgcggcgggcgggcattgtgcccaacaccatc
acctatggctactacaacaaggctgtgctggaaagcaagtggccgtcgggcacaccgggt
gggcgcctgcgctgggccaagctccggaatgttgtcctgggagctgctcagttccgccaa
cccctgaaagagcggcggcggcagcagcagcagcagcagcagcagccggcagcacagcaa
gaggcaggcagctcccagacagagccctgtctggagcgcccctcccctacccgcccactc
cagcgccagactacctgggctgggcgaagtctgagggacccagcctcccctgcggggcgc
ctggtgaagagcgggagcctgggcagtgcccgaggcgcacagcccactgtggaggccggt
gtggcccacatgatagaggccttgggggtgctggaaccccgcggctcacctgtgccctgg
catgatggaagtctctcagacctgagccttaccggggaggagctggcacctgggggcagc
ccagggggttcaggccctgccttgagtgcccagtccactgaggccctggaagggctaagt
ggccgcgggcccaaggctgctgggcatcaggaggaggcgggcaccccccgacgagggctg
ggtgctcgccttcagcagctgctcaccccctcccgccgctcccctgcctcccgcattccc
ccacctgagctgcccgctgacctgccacccccagcccgccgcagccccatggacagcctc
ctgcacccccgggagcgccctggatccactgcgtccgagagctcggcctctctgggcagt
gagtgggacctctcagaatcttctctcagcagcctgagcctccgccgttcctcagagcgc
ctcagtgacacccctgggtcctcccagccaccttccctggaaattctgctgtccagctgc
tccctgtgccgtgcctgtgattcgctggtgtacgatgaggagatcatggccggctgggca
ccggacgactctaacctcaacacaacctgccccttctgcgcctgtcccttcgtgcccctg
ctcagcgtccagacccttgattcccgacccagtgcccccagccccaagccgacccctgct
ggtgccagtggcagcagagatgctcccgtccctgggggtcctggccccgtgctcagtgac
cgtaggctctgcctcgccctggacgagccccagctctgcaacgggcacatggggggtacc
tcccggcgagtggagagtggcgcgtgggcatacctgagccccctggtgctgcgtaaggag
ctggagtcgctggtagagaacgagggcagtgaagtgctggcgttgcctgagctgcctgct
gcccaccctatcatcttctggaaccttctgtggtatttccaacggctgggcctgcctagt
attctgccgggcctggtgctggcctcctgtgatgggcccccagcccctcaggccccacct
ccttggctaacctctgatccagcctctgtgcaggtgcggctgctgtgggatatcctgacc
cctgatcccaatagctgtccacctctctatgtgctctggagggttcacagccagatcccc
cagagggttatgtggccaggcccagtacccgcctcccttagtttggcgttgttggagtca
gtgctgcgccacgttggactcaatgaggtgcataaggctgtggggctcctgctggaaact
ctggggccccctcccactggcctgcacctgcagaggggcatctaccgtgagatcttattc
ctgacaatggctgctctgggcaaggaccacgtggacataggggccttcgacaagaagtac
aagtccgcctttaacaagctggccagcagcatgggcaaggaggagctgaggcagcggcgg
gcacagatgcctacgcccaaggccattgactgccggaaatgttttggagcacccctggaa
tgctag
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