Oryctolagus cuniculus (rabbit): 100338469
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Entry
100338469 CDS
T03373
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03250
Viral life cycle - HIV-1
ocu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100338469
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100338469
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100338469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100338469
03110 Chaperones and folding catalysts [BR:
ocu03110
]
100338469
04121 Ubiquitin system [BR:
ocu04121
]
100338469
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100338469
Chaperones and folding catalysts [BR:
ocu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
100338469
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100338469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
IR1-M
Pro_isomerase
WH1
TPR_2
TPR_1
TPR_14
TPR_16
TPR_8
ANC1_spectrin
ARM_TT21_C
TPR_CcmH_CycH
TPR_7
TPR_11
TPR_12
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
100338469
NCBI-ProteinID:
XP_051690482
LinkDB
All DBs
Position
2:complement(84225461..84298722)
Genome browser
AA seq
3129 aa
AA seq
DB search
MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEAEENTDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAVYKLKEQLLDCKGEDGWNKLFDLIQSELYTRPDDVHMNIRLVELYRSNKR
LKDAVAHCHEREKNIALRASLEWNSCVVQTLKEYLESLQCLDSDKSNWRTTNKDLLLAYA
NLMHLTLSIRDVQESRELLESFDGALQSVKSSVGGNDELSAAFLEVKGHFYMHAGSLLLK
MGQHSDGQWRALSELAALCYLIAFQVPRPKIKLIKGEAGQNLLEMMAYDRLSQSGHMLVN
LSHGKQDFLKEIVESFANKSGQSALYDALFSSRSPKDKSFLGDDDIGNVDVHIPESDELA
RYDVGAVRAHNGSLQHLTWLGLQWNSMPDLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSYLQLKEKCNSHYSSYQPLCLPLPVCKQLCTERQKTWWDAVCNLIH
RKAIPGASAKLRLLVQHEMHTLRGQEKHGLQPSLLVHWAKYLQRTGSSLNSFYDQREYLG
RSVHYWKKVLPLLKTIKKKSSIPEPTDPLFKHFHAADIQASEIGEYEEDAHITFAILDAV
NGNVEDALSAFESIKNVVSYWNLAQIFHRKAEDIENDALSPEEQEECKNYLRKTRDYLIK
ILDDSDSDLSVARKLPVPLESVKEMLNSVMQELEDYSEGGPLCKNGSLRNTDSEIKHSTP
SPTLYSLSPSKSYKYSPKTPPRWAEDQNSLLKMICQQVEDIKKEMQELKLNSSNSASPHR
WPTENYGPDSVPDGYQGSQTFHGAPLTVSTTGPSVYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYAYSQMHTPPVQSSSACMFSQDMYGPPLRFESPATGIMSPRGDDYF
NYSVQQPNTNPSLPEPGYFTKPPPVANHASRSAESKVIEFGKTSFVQPVPGEGIRPSLTT
PAHTTQPPPFKFNSNFKSNDGDFTFSSPQVMTQPPSAPYGSSERLLGLLTSDKPLQGECY
SGPKPIPSQTIGPRNTFNFGSKNMSGISFTENMGPNQQKNSGFRRSDDMFTFHGPGKSVF
GTPAPELASKNHDTDAGSAHGDEDEDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLF
RFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDK
SFVWHALDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSILKASGTNLATAPNETIRT
VKDSASHDNKDICKSDAGNMNFEFQVGKKEGSWWGCNSCSLKNAATVKKCVSCQNLNPSS
KELLGPPLVETVPAPKTGPANAQDRFASVAPVKEGYWDCSVCLVRNEPTVSKCSACQSTK
SANKTGSSFVHQASFKFGQGDLPKSVNSDFRSVFSMKEGQWDCSLCLVRNEGSAAKCIAC
ENPRKQSLPASAVAAPASFQFGTSETSKAPKSGFEDVFAEKEGQWDCNVCLVRNEPDATK
CIACQNPAKPGPPAAAAAPASFQFGTSETSKAPKSGFEGMFAKKEGQWDCSLCLVRNEET
ATQCIACQSPNPQNQPTSAVPASASAEMSKAPKTGLEGLFPKKEGQWDCSVCLVQNEGSS
LKCVACGASKSTHKPIAETPSAFTLGSKTKLSDSSASQVETGFKSNFSEKAFKFGSTAEQ
GFKFGHADPENAPSFTFQGSSNTESKSTKEGFSFSIPVSADGFKFGIQEQGNQERNEKHP
ENDTGFQAQDASSQKNGSGVIFGQKSSTFTFADLAKSTSGEGFQFGKKDPNFKGFSGAGE
KLFSSQSGKIADRTNTSADLEKDDDAYKTEENDDIHFEPVVQMPEKVELVTGEEDEKVLY
SQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLK
PLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHK
LVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVSDEESKSSDAGSANASDTTIKPNPE
NTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALS
PSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHR
AKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMK
GTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKVAQEKDSLITPHVSRS
STPRESPCGKIAVAVLEETTRERTDLIQGDDVADTTSEVGEGSSTTETTTKAVVSPPKFV
FGSESVKSIFSSEKSKPFAFGNSSATGSLFGFSFNAPLKNNNSETSSVVQSGSERELEPA
KSELSKSSDLKHPSDGKARNLLASFPKEEASTGYIFKTPEKGFNFSLFKSNPMAFWTSTP
SSQPESGAKEKKNSADLPPDDDVLIVYELTPTPDQKALAAELKLPPTFFCYKNRPDYVSE
EEEDDEDFETAVRKLNGKLYLDDSEKCKPLEDNLTDPEKECVIVWEKKPTVEEKAKADTL
KLPPTFFCGVCSDTDEDNGNGEDFQSELQKVQEAQKSQSEEIASTADGVCTGGTEVTAPS
LGKSEEPDSVAKCIGSPPVSCGAADKPVDLSTRKEIEPGSTSQVESKTVSFGFGSSTGLS
FADLASSNSGDFAFGSKDKNFQWANTGAAVFGAQTTNKVGEDEDGSDEEVVHNEDIHFEP
IVSLPEVEVKSGEEDEEVVFKERAKLYRWDRDASQWKERGVGDIKILWHRMKNYYRILMR
RDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMADCFK
KKFEECQQNLLQLQKGHVSLAELSRETNPVVFFDICADDEPLGRITMELFSNIVPQTAEN
FRALCTGEKGFGFKNSIFHRVIPDCLCQGGDITKHDGTGGKSIYGDKFEDENFDVKHTGP
GLLSMANRGPNTNNSQFFITLGKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRR
ISITECGQI
NT seq
9390 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggccgacgtggagcggtatatcgcttcggtgcagggctccgccccg
tcgccgcgagagaagtcaatgaaaggattctattttgcaaaactgtactatgaagctaaa
gaatatgatcttgctaaaaaatatatatctacatatattaatgtgcaagagagggatccc
aaagctcatagatttctgggacttctttatgaggcagaagaaaacacagacaaagctgtc
gaatgttataagcgttcagtggaattaaacccaacacaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaacgatgttactgatggaagagcaaaatactgggttgaaaga
gcagctaagcttttcccaggaagtcctgcagtctataaactaaaggaacaacttttagat
tgtaaaggtgaagatggatggaataaactttttgacttgatccagtcagaactttacaca
agacctgatgatgtccatatgaacatccgactagtggaactgtatcgctcaaataaaaga
ttgaaggatgctgtggcccactgccatgagagagagaagaacatagctttgcgtgcaagt
ttagaatggaattcatgtgttgtccagactcttaaggagtatctggaatctctacagtgt
ttggactctgataaaagtaactggcgaacaaccaataaagacttacttctggcgtatgct
aacctcatgcatcttacactttctatcagggatgtgcaggaaagtagagaattactggaa
agctttgatggtgctctgcagtctgtgaaatcttctgtgggtggaaatgatgagctgtca
gcagcgttcttagaagtgaaaggacatttctacatgcacgctggttccctgctcttgaag
atgggtcagcacagcgacggacagtggcgcgcgctctctgagctggctgccttgtgctat
ctcatagcgtttcaggttcccagaccaaagattaaattaataaaaggagaagctggacaa
aatctgctggaaatgatggcttatgatcgactgagccaatcagggcacatgttggtaaac
ttgagtcatggcaaacaagattttttaaaagagattgtggaatcttttgccaataaaagt
ggacagtctgctttatatgatgctctattttctagtcggtcacctaaggataaatctttt
cttggtgatgatgatattggaaacgttgatgtacatataccagagtctgatgagttggct
agatatgatgttggtgccgttcgtgcacataatggcagtcttcagcaccttacctggctt
ggcttacaatggaattcaatgcctgatttacctgcaattcgaaaatggctaaaacagctt
tttcatcatctgcctcaggaaacttcaagacttgaaacaaatgcacctgaatccatatgt
attttagatcttgaagtatttttactcggagtgatatataccagctatttacaattaaag
gagaaatgtaattctcactatagctcctatcagcctctatgcttgccacttcctgtgtgt
aaacagctttgtacagagaggcagaagacttggtgggatgcagtttgtaatctaattcac
agaaaggcaatacctggagcctcagcaaaattacgacttctagttcagcatgagatgcac
acactaaggggccaggaaaagcatggtcttcaaccttctctgcttgtacactgggcaaaa
taccttcagagaacgggcagcagccttaattctttttatgatcaacgggaatacctaggc
agaagtgttcattattggaaaaaagttttgcctttgttgaagacaatcaaaaagaagagc
agtattcctgaacctactgatcctctatttaaacattttcatgctgcggacattcaggca
tctgaaattggtgaatatgaagaggatgcacatataacttttgctatattggatgcagtt
aatggaaatgttgaagatgctctgtctgcttttgaatcaataaaaaacgttgtttcttac
tggaatcttgcacagatttttcacaggaaagcagaagacattgaaaatgacgccctttct
cccgaagaacaagaagaatgcaaaaattatctgagaaagaccagggactacctaataaag
attttagatgacagtgattcagatctttcagtggcccgaaaattgcctgtgcccctagag
tctgtaaaagagatgctgaattcagtcatgcaggaacttgaagactacagcgaaggaggt
cctctttgtaaaaatggttctttgcgaaatacagattcagaaataaaacattctacacca
tctcccaccttatattctctgtcacctagtaaaagttacaagtattctcccaaaacacca
cctcgatgggcagaagatcaaaattccttactgaaaatgatctgccaacaagtagaggac
attaagaaagaaatgcaggaattaaaactaaatagcagtaactcggcatcccctcatcgt
tggcccacagagaattatggaccagactcagtgcctgatggataccagggatcacagact
tttcatggggctccattaacagtttcaactactggtccttcagtatattatagtcagtca
ccagcatacaattcccagtatctcctcagaccagcagctaatgttactcccacaaagggt
ccggtttatggcatgaataggcttccaccccaacagcatatttacgcgtattcacagatg
cacacaccaccagtgcaaagctcatctgcttgtatgttctctcaggacatgtatggtcct
ccattgcgtttcgagtctcctgcaacaggaattatgtcacccaggggtgatgattatttt
aattacagtgttcagcagccaaacacaaacccatccttgccagaaccaggatatttcaca
aaaccacctccagtggcaaatcatgcttcaagatctgccgaatctaaggttatagaattt
ggaaaaacaagttttgttcagcctgtgccaggtgaaggaataaggccgtcattgacaaca
cccgcacatacaacacaaccacctccttttaagtttaactcgaatttcaagtcaaatgat
ggtgacttcacattttcctcacctcaggttatgacgcaacccccttctgcaccttatggt
agtagtgaaaggcttttaggtctcctgacttcagataaacctttacaaggagagtgctat
agtggtccaaagccaattcctagtcagaccatcgggcctcggaatacattcaattttgga
agcaaaaatatgtctggaatctcatttacagaaaacatggggccaaatcagcaaaagaat
tcagggttccgtcgaagtgatgacatgtttactttccatggaccagggaagtcagtgttc
gggacacctgctccagagctggcgagcaagaaccatgacacagacgcaggcagtgcccat
ggagatgaggatgaggatggcccgcactttgagcccgtggtccctcttcctgataaaatc
gaagtgaagactggtgaggaagatgaagaagaattcttctgtaatcgtgctaaattattc
cgcttcgatggagaatccaaagaatggaaggaacgtgggattggcaatgtaaaaatactg
aggcataagacatctggtaaaattcgtcttctgatgaggcgagagcaagtattgaaaatc
tgtgcaaatcattacattagtccagatatgaaattgacaccaaatgctggatcagacaaa
tcttttgtatggcacgcccttgattatgcagatgagtcgccgaaaccagaacagctggct
attagattcaaaactcctgaggaggcagcgctttttaagtgcaagtttgaagaggcccag
agcattttaaaagcctcaggaactaacttagcaacagcaccaaatgagactatcagaact
gtaaaagactccgcaagtcatgacaacaaggatatttgtaaatctgatgctggaaacatg
aattttgaatttcaagttggaaagaaagaagggtcttggtggggctgtaacagctgctcc
ttgaaaaatgctgcaactgtgaagaaatgtgtatcatgccaaaatctaaacccaagtagt
aaagagctccttggcccaccattagttgaaacagttcctgctcctaaaactggcccagcg
aatgctcaggatagatttgcctcagtggctccagtgaaagaaggttattgggactgtagt
gtttgtttagtaaggaatgaacctactgtatctaagtgcagtgcatgccaaagtacaaaa
tctgctaacaaaactgggtcttcatttgttcatcaggcttcctttaaatttggccaggga
gatcttcctaagtctgtcaatagtgacttcaggtctgtgttctctatgaaggaaggacag
tgggattgcagtttgtgcttagtgcggaatgaagggagcgctgcaaaatgcattgcctgt
gagaatccaagaaaacagagtctacctgcctctgctgttgcagctcctgcctctttccag
tttggtacttcagagacaagtaaagcaccaaagagcggatttgaggatgtttttgccgag
aaggaaggacagtgggactgcaatgtctgcttggtgcgaaatgaaccagatgctacaaaa
tgcattgcctgtcagaatccagctaaaccaggcccacctgctgctgctgcagcccctgcc
tctttccagtttggtacttcagagacgagcaaggctcctaagagcggatttgaggggatg
ttcgccaagaaggaaggacagtgggactgcagtttgtgcttagtaagaaatgaagagact
gctacccaatgtattgcttgtcagagtccaaacccgcagaaccagcctacttctgctgtt
ccagcatctgcctctgcagagatgagcaaggctccaaagactggactggaaggactgttc
cccaagaaggaaggacagtgggattgtagtgtttgccttgtacaaaatgaaggttcttcc
ttaaaatgcgtggcttgtggtgcctctaaatcaactcataagcccattgcagaaactccc
tcagctttcacattgggctccaaaacaaagttaagtgactcttctgcaagtcaggtagag
acaggattcaaaagtaacttttcagaaaaagcttttaaatttggcagtacggcagagcaa
gggtttaagtttggacatgcagatccagaaaatgcaccgtcatttacatttcagggttct
tctaatacagaatccaagtcaacaaaagaagggtttagtttttcaattcctgtgtctgct
gatggctttaaatttggtattcaggaacagggaaatcaagagaggaatgagaaacaccct
gaaaatgacactggtttccaggcacaggatgctagtagccaaaagaatggtagtggtgtg
atctttggtcaaaaaagtagcacttttacctttgcagatcttgcaaagtcaacttcagga
gaaggatttcagtttggcaaaaaagaccccaatttcaagggattttcgggtgctggagaa
aaattattctcatcacagagtggtaaaattgctgatagaaccaacacttctgctgatctt
gagaaagatgatgatgcctataagactgaggaaaatgatgacattcattttgagccagta
gttcagatgcctgaaaaagtagaacttgtaacaggagaagaagatgaaaaagttctgtat
tcacagcgggtgaaactgtttaggtttgatgctgagataagtcagtggaaagaacggggc
ttaggcaatttaaaaattctcaaaaatgaggtgaatggaaaactaagaatgctgatgcga
agagaacaagtcctaaaagtgtgcgctaatcattggataacaactacaatgaacctgaag
cctctctctggatcagatagagcgtggatgtggttggctagtgatttctctgatggtgat
gccaaactagaacagctggcagcaaaatttaaaacaccagagctggctgaagaattcaag
cagaagtttgaggaatgccagcgacttctgttagatataccacttcagactccccataaa
cttgtagatactggcagagctgctaagttaatacagcgagctgaagaaatgaagagtgga
ctgaaagatttcaaaacgtttttgacaaatgatcagacaaaagtcagtgatgaagagagt
aagagttccgacgcagggtcggccaatgcttcagatacaacaatcaagccaaatcctgaa
aacacggggcccacgttagagtgggacaactatgatttaagggaagatgctttagatgat
agtgtaagtagcagttcagtacatgcttctccattggcaagcagccctgtgaggaaaaat
cttttccgctttggtgagtcaacaacaggattcaacttcagtttcaagtctgctttgagt
ccatctaagtctcctgccaagttgaatcagagtgggacttcagttggtactgatgaagaa
tctgatgtgactcaagaagaagagcgagatggccagtactttgaacctgttgtaccttta
cctgacctagtagaagtatccagtggtgaggaaaatgagcaagtagtttttagtcacaga
gcaaaactctatagatatgataaggatgttggtcagtggaaagaaaggggcattggtgat
ataaagattttacagaattatgataataagcaagttcgtatagtgatgagaagggaccag
gtattaaaactttgtgccaaccacagaataacaccagatatgacactgcaaaatatgaaa
gggacagaaagagtatgggtgtggactgcttgtgattttgcagacggagaaagaaaaata
gaacatttagctgtgcgttttaaactacaagatgttgcagactcatttaagaaaattttt
gatgaagcaaaagtagcccaagaaaaggattctttgataacaccgcacgtttctcggtca
agcactcctagagagtcaccatgtggcaaaattgctgtagctgtgttagaagaaaccaca
cgagaaaggacggatttaattcagggtgatgacgtagcagacacaacttccgaagttgga
gaagggtctagcacaactgaaacaacaacaaaagcagtggtttctcctcccaaatttgtg
tttggttcagagtccgttaaaagcatctttagtagtgaaaaatcaaagccatttgcattc
ggcaacagttcagccactgggtctttgtttggatttagttttaatgcacctttgaaaaat
aacaacagtgaaactagttcagtagtccagagtggatctgaaagagaactggaacctgcc
aagtctgaactgtcgaagagctctgatctcaaacatccttcagatggcaaagccagaaat
ctcttggcttcctttccaaaggaagaagcctcaaccggttacatctttaaaacaccagaa
aagggatttaattttagcctttttaaatctaatccaatggctttttggaccagcacccct
tcctcacagcctgagagtggagcaaaagagaagaaaaattctgcagatcttcctccagat
gatgatgttctcattgtgtatgaactaaccccgactcctgaccagaaagcccttgcagcg
gagcttaaacttcctccaactttcttctgctataagaatagaccagattatgttagtgaa
gaagaggaggatgacgaagattttgaaacagctgtcagaaaacttaatggaaaactctat
ctggatgactcagaaaaatgtaagcccttggaagacaatctaacagatcctgagaaagaa
tgtgttattgtttgggagaagaaaccaacagttgaagagaaagcaaaagcagatacctta
aagcttccacccacatttttttgtggagtttgcagtgatactgatgaggacaatggaaat
ggggaagactttcagtcagagcttcagaaagttcaggaagctcaaaaatcccagagtgag
gaaatcgccagcacagcagatggtgtatgtacaggtgggactgaagtgactgctccgtcg
ttagggaaatctgaagaacctgattctgttgccaaatgtattggttcaccacctgtttcc
tgtggagctgcagacaagcctgtggatttgtctactagaaaggaaattgagccaggttct
acaagccaagtggaaagcaaaacagtttcatttggatttggaagtagcacagggctttca
tttgcagatttggcttccagtaattctggggattttgcttttggttctaaagataaaaat
ttccagtgggcaaatactggtgcagctgtatttggagcacagacaaccaataaagttggt
gaagatgaagatggtagtgatgaagaggtagttcataatgaagatatccactttgaacca
atagtgtcattaccagaggtagaagtaaaatctggagaagaagatgaagaagttgtgttt
aaagagagagccaaactttacagatgggatcgtgatgccagccagtggaaggagcgtggt
gtaggagacataaagatcctttggcataggatgaagaactattatcggatcctaatgagg
agagaccaggtcttcaaagtgtgtgcaaaccatgttattaccaaaacaatggaattaaaa
cccttaaatgtttcaaataatgctttagtttggactgcttcagattatgctgatggagaa
gcaaaagtggaacagcttgcagtgagatttaaaacaaaagaaatggctgattgttttaag
aaaaagtttgaagaatgtcaacagaatttattgcaactccagaaagggcatgtttcactg
gcagaattgtcaagagagaccaaccctgtggtgttttttgacatttgtgccgatgatgaa
cctttagggcgtataaccatggagttattttcaaacatcgttcctcagactgctgagaac
ttcagagcactgtgtactggagagaagggctttggtttcaagaactccatttttcacaga
gtaattccagattgtctttgccaagggggagatatcaccaaacatgatggaacaggagga
aagtctatatatggagataaatttgaagatgaaaattttgatgtgaaacacactggtcct
ggcttgctgtcaatggccaataggggcccaaataccaataattctcaattttttataaca
ctgggaaaagcagaacatttggacttcaagcatgtagtatttgggtttgttaaggatggc
atggatactgtgaaaaagattgagtcatttggttctcctaaagggtctgttagtcgaaga
attagcatcacagaatgtggacagatataa
DBGET
integrated database retrieval system
