KEGG   Oryctolagus cuniculus (rabbit): 100338489
Entry
100338489         CDS       T03373                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100338489
Enzymes [BR:ocu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100338489
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100338489
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-RING_5 DUF3450 Crescentin zf-ANAPC11 zf-C3HC4_3 zf-RING_11 zf-RING_Vps41 Tropomyosin HIP1_clath_bdg MscS_porin His_kinase zf_RING_Vps8 zf-RING_16 Fez1 HMMR_N RINGv WEMBL FANCL_C RING_XB3-XBAT31 DUF745 OVT1 zf_RING_Vps8_fungal UCH GAS CCDC93_CC Zn_ribbon_8
Other DBs
NCBI-GeneID: 100338489
NCBI-ProteinID: XP_002713403
Ensembl: ENSOCUG00000008746
UniProt: G1SVT2
LinkDB
Position
9:98711206..98751632
AA seq 582 aa
MVMSLLLAPIQRCAPEALVKSSQTPASYRATPQGSLPPPGLQVPPLVTPPRACPMRGKHS
GPAPVLCCHFRSVPGSRAVEPNLKRAGARPGSWSCRSFLGYLGLLSLTVMPIRALCTICS
DFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEE
SVLDPEFLKNELDNVRAQLSQKERERQDSQAIIDALRDSLEERNATVESLQKALSKTEML
CSTLKKQMKYLEQQQDENKQAQEEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQ
SAVEQLAVYCVSLKKEYENLKKARKASGELADKLRKDLISSRNKLQTVYSELDQAKLELK
SAQKDLQNADKEITSLRKKLTMLQETLNLPPVASETVNRLVLESPAPVEMLNLKLRRPSF
GDDIDLNAIFDVNTPPARPSSSQHAHCKKPCMEKAHSPDQDVSKKVAKGSKQEPQLLLGG
QRCAGELDEELADAFPVFIRNAVLGQKQPKRAKTESCRNTDAVRTGFDGLGGRTKFIQPT
DIAVIRPLPVKPKAKTKQRVGVRPLNPPSQAKMDTFLWQRDQ
NT seq 1749 nt   +upstreamnt  +downstreamnt
atggtgatgtcactgctcctcgccccaattcaaagatgcgctcccgaggcgctggtcaag
tcctcccagacacctgcaagctatcgcgcgacaccacagggctctctaccgcccccaggc
ctccaagttccgcccctggtcacgccccctagagcttgtccaatgaggggcaagcattca
gggcccgccccggtcctgtgttgtcatttccggtccgttcccggaagtcgcgccgtggag
ccaaatttgaagagagcgggggcgcgtccaggaagctggagctgtcgcagcttccttggc
tacctgggcctcttgagtctaacagtcatgcctatccgtgcgttgtgcactatctgctcg
gacttcttcgaccactctcgagacgtggccgccatacattgcggccacaccttccacctg
cagtgcctgattcagtggttcgagacagccccaagtcggacttgcccacagtgccgaatc
caggttggcaaaagaaccattatcaacaagctcttctttgaccttgcccaggaagaggag
agtgtcttggatccagaattcttaaagaatgaactggataacgtcagagcccagctttcc
caaaaagagagggagagacaggacagccaggccatcatcgacgctctgcgggactcgctg
gaagagcgcaatgccactgtggaatctcttcagaaggccttaagcaagaccgagatgctg
tgttccactctcaaaaagcagatgaaatacttggaacagcagcaggatgaaaacaaacaa
gcacaggaagaagcccgccggctcaggagcaagatgaagaccatggagcagattgagctt
ctacttcagagccagcggcctgaggtggaggagatgatccgagatatgggtgtgggacag
tcagcggtggagcagctagctgtgtactgtgtatccctcaagaaagagtatgaaaatcta
aaaaaggcacggaaggcctcaggggagctggctgacaagctgaggaaggacttgatttcc
tctagaaataagctgcaaacagtctactctgaattggaccaggctaagttagagctgaag
tctgcccagaaggacttacagaatgctgacaaggaaatcacgagcctaagaaagaagcta
acaatgctgcaggaaaccttgaacctgccaccagtggccagtgaaactgtcaaccgcctg
gttttagaaagcccagctcctgtggagatgctgaacctgaagctccgccggccatccttc
ggtgatgacattgacctcaatgctatctttgatgtgaacactcccccagcccggccctcc
agctcccagcatgctcactgcaagaagccctgcatggagaaggcacactctcctgatcaa
gacgtctccaagaaggtagccaaaggctccaagcaggagccccagctcttgctgggtggc
cagcgctgtgcaggagagctagatgaggaactggctgatgccttccctgtcttcatccgc
aatgctgtcctgggccagaagcagcccaaaagggccaagacagagtcctgtcgaaacaca
gatgctgtaagaacaggcttcgatgggcttggaggccggacaaaattcattcaacctact
gacattgccgtgatccgcccactgcctgttaaacccaaggccaagaccaaacagagagta
ggagtgagacctctgaaccctccctcccaggccaagatggacaccttcctgtggcagaga
gaccagtga

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