Oryctolagus cuniculus (rabbit): 100338489
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Entry
100338489 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100338489
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100338489
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100338489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_5
DUF3450
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
Crescentin
Tropomyosin
HIP1_clath_bdg
MscS_porin
His_kinase
zf-RING_16
Fez1
HMMR_N
RINGv
WEMBL
FANCL_C
DUF745
UCH
GAS
CCDC93_CC
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
100338489
NCBI-ProteinID:
XP_002713403
UniProt:
G1SVT2
LinkDB
All DBs
Position
9:98711206..98751632
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AA seq
582 aa
AA seq
DB search
MVMSLLLAPIQRCAPEALVKSSQTPASYRATPQGSLPPPGLQVPPLVTPPRACPMRGKHS
GPAPVLCCHFRSVPGSRAVEPNLKRAGARPGSWSCRSFLGYLGLLSLTVMPIRALCTICS
DFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEE
SVLDPEFLKNELDNVRAQLSQKERERQDSQAIIDALRDSLEERNATVESLQKALSKTEML
CSTLKKQMKYLEQQQDENKQAQEEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQ
SAVEQLAVYCVSLKKEYENLKKARKASGELADKLRKDLISSRNKLQTVYSELDQAKLELK
SAQKDLQNADKEITSLRKKLTMLQETLNLPPVASETVNRLVLESPAPVEMLNLKLRRPSF
GDDIDLNAIFDVNTPPARPSSSQHAHCKKPCMEKAHSPDQDVSKKVAKGSKQEPQLLLGG
QRCAGELDEELADAFPVFIRNAVLGQKQPKRAKTESCRNTDAVRTGFDGLGGRTKFIQPT
DIAVIRPLPVKPKAKTKQRVGVRPLNPPSQAKMDTFLWQRDQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcactgctcctcgccccaattcaaagatgcgctcccgaggcgctggtcaag
tcctcccagacacctgcaagctatcgcgcgacaccacagggctctctaccgcccccaggc
ctccaagttccgcccctggtcacgccccctagagcttgtccaatgaggggcaagcattca
gggcccgccccggtcctgtgttgtcatttccggtccgttcccggaagtcgcgccgtggag
ccaaatttgaagagagcgggggcgcgtccaggaagctggagctgtcgcagcttccttggc
tacctgggcctcttgagtctaacagtcatgcctatccgtgcgttgtgcactatctgctcg
gacttcttcgaccactctcgagacgtggccgccatacattgcggccacaccttccacctg
cagtgcctgattcagtggttcgagacagccccaagtcggacttgcccacagtgccgaatc
caggttggcaaaagaaccattatcaacaagctcttctttgaccttgcccaggaagaggag
agtgtcttggatccagaattcttaaagaatgaactggataacgtcagagcccagctttcc
caaaaagagagggagagacaggacagccaggccatcatcgacgctctgcgggactcgctg
gaagagcgcaatgccactgtggaatctcttcagaaggccttaagcaagaccgagatgctg
tgttccactctcaaaaagcagatgaaatacttggaacagcagcaggatgaaaacaaacaa
gcacaggaagaagcccgccggctcaggagcaagatgaagaccatggagcagattgagctt
ctacttcagagccagcggcctgaggtggaggagatgatccgagatatgggtgtgggacag
tcagcggtggagcagctagctgtgtactgtgtatccctcaagaaagagtatgaaaatcta
aaaaaggcacggaaggcctcaggggagctggctgacaagctgaggaaggacttgatttcc
tctagaaataagctgcaaacagtctactctgaattggaccaggctaagttagagctgaag
tctgcccagaaggacttacagaatgctgacaaggaaatcacgagcctaagaaagaagcta
acaatgctgcaggaaaccttgaacctgccaccagtggccagtgaaactgtcaaccgcctg
gttttagaaagcccagctcctgtggagatgctgaacctgaagctccgccggccatccttc
ggtgatgacattgacctcaatgctatctttgatgtgaacactcccccagcccggccctcc
agctcccagcatgctcactgcaagaagccctgcatggagaaggcacactctcctgatcaa
gacgtctccaagaaggtagccaaaggctccaagcaggagccccagctcttgctgggtggc
cagcgctgtgcaggagagctagatgaggaactggctgatgccttccctgtcttcatccgc
aatgctgtcctgggccagaagcagcccaaaagggccaagacagagtcctgtcgaaacaca
gatgctgtaagaacaggcttcgatgggcttggaggccggacaaaattcattcaacctact
gacattgccgtgatccgcccactgcctgttaaacccaaggccaagaccaaacagagagta
ggagtgagacctctgaaccctccctcccaggccaagatggacaccttcctgtggcagaga
gaccagtga
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