Oryctolagus cuniculus (rabbit): 100338658
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Entry
100338658 CDS
T03373
Name
(RefSeq) zinc finger protein 40 isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100338658
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100338658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_16
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
100338658
NCBI-ProteinID:
XP_051711065
Ensembl:
ENSOCUG00000012379
LinkDB
All DBs
Position
12:complement(149816679..149962576)
Genome browser
AA seq
2651 aa
AA seq
DB search
MPRTKQIHPRNLRGLHSVQTLRSALAQTWMGGTEPSLHLVACHCTEYLRQLSYSGVQCLH
GLRVQKQYGVKDKIEEAQKELNGAEVSKKEILEAGIKGASESLKGVKRKKIVAENHLKKI
PKSPLRNPLQAKQKQNTEEAAFAAPQGAAGAQRRQNPLSVKNGKQLTRQNGDAPAIAAED
SVSPKKPPFVQHAAELRRWRSEGPGPARVGVLDGKRDSPAGAARPAGRDGGASPCRAPSP
PYTATAFDVLLKAMEPELSTLSQKGSAGAMKAEKPRASKTGRSPSRLKTSSVDAPGQPAC
ESAAGPQPAPGALFAAHVATVQQEQAPAQPASRPYSRHEHFVSQPSQHHQQLPGCSGFVG
AQPTLQSRENANLEQVHNTTVTSSVGPPCPSRTQVTPQSQHLEVAAPLSVSPVTSAQSPP
APVYNSVVNQSVEQMCNLLLKDQKPKKQGKYICEYCSRACAKPSVLLKHIRSHTGERPYP
CVTCGFSFKTKSNLYKHKKSHAHTIKLGLVLQPDAGGLFLSQESPKALSIHSDAEDSGES
EEEGAPEERPSDPGAMKLQPVQVTKRLSGTEALLASSSVLGRADRAVDRSAESVTDLPKV
VVHPSTVSPARTDAPKAVSPKLELVSAQRHKELQVPHVLSPSAGASPLEMDEQSHRKGDA
SQPEGKADAAAGTAHAQLQRQQATDCSQEQQGKLLSPRSLGSTDSGYFSRSESADQAVSP
PTPFARTLPAPEQDASKAAGLPGPRGSAPAPSAFPPGDRGQLLPGQMRPPLATKTLEERI
SKLISDNEALVDNKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMGRRTSSSSD
IPKSPFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPASIIPPPHPLRGSQSFD
DKIGAFYDDVFVSGPNPSVPPSGHPRTLVRQAAVEDASAGDHQALGPGQPSEESLHGCQA
AGEGVAAARGKAPAPGAHPEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHG
PKTKVALREPEQSLVAGGAQPQMLHYRVAGSTGIWEQTPQVRKRRKMKSVGDEEELQQTD
GGAAPQSCEAPASQSALGSAPAAAPTREPQRRSTHLQSSQVQLAARGLDQPADAKLTTIA
EQHLGPAAMDKGELARIGSGISVIQHTNSLSRPGSLDKPEPSEGGPPGSLQELGRTGKPG
ALKVVGGSQEEAHPSREAAPLAQPAPAGPLRGEPQEGSRKMSGERHVLGQPSRLVRQHNI
QVPEILVTEEPDRDLEAQSHDPEKSEKFSWPQRSETLSKLPTEKLPPKKKRLRLAEMERS
STESSFDSTLSRSLSRDSSLSHTSSFSASFDTEDVSPKAECLNKAEFLLIPPASNTLSVP
GGPREMRRAASEQIGCVQTSMEVSDLRSKSFDCGSVTPPRPARLPLREPQPSASPGHVPL
LERRRGPLIRQISLNIAPEGLSSSSPAHPASTVPLLVPALPAPPLPEFPAPGKDLRPEAA
NSGSSSILPGQQIFGTNLLNRSHAPLSRQNAQSAPHVSSQGDHPGAGPGPRDASKNEDCF
APKYQLHCQVLASGKSSPSSPAHALPNQALSDPAGVDHGAMAAVLPSELGDLRSRSCPRP
PPELGPLGGQGQKVPPSFVLPVPLHGSVPAYCFPAVTSLPQILVTQDLSSQPICQANPSI
VPVSEELNSVPRSQKDEQTALPNSKKELVCDLAFSEPGPSPVLESSALTPKMSVGRLSPQ
QESSASSKRMLSPANSLDIAMEKHQKRAKDENGAVCAPEARPPEPPSSRAGEVNKQKKPV
LVRQVCTTEPLDGAAAAAEQGAFSQPDVSSGASVHLTDVLPADSSSSGPVSEAQESESIK
SPAPSGNSPVRPETTHVSPPQCARGDQERKSPGVRVTGQDPRQLAGTTLPLGDTRDTQQL
AFPSLKTATGFTWCYLSRRKSLPWPQRDQRTSAYSDWTVSSRDPNPLGLPTKVALSLLNS
KQKTGKSLYCQAITTHSKSDLLVYSSKWKSNLGKRALGNQKSTVVEFSNKDASEINSEQD
KENSLIKSEPRRIKIFDGGYKSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHT
DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYE
RSGYDLEESDGPDEEENENEDDDEDSQAESVLSAAPSVPASPQHLPCRGGLPEPVSADED
SRTPDCCSGLHADPMDVLPRALLTKMTVLSAVRSGCGRKTDSPVKARLPAAKDEGRGPPG
ADPAPRAAPRSPCRQMSVDYPEAEEILSSPAAGKNLSPAGLPAASPHSPSPAAGVPAQAS
PRPDTQEQKQQATQRPTPGSPSPSPQTHLFSHLPLHSQQQSRTPYNMVPVGGIHVVPAGL
TYSTFVPIQAGPMQLAIPAVSVLHRTMGTPADAAAEAPGTAQPPSSVVPCIPIGQIRVPG
LQRLRPPGSLETVSIVGLAGGSVGPQVQPPGLALNAVGLQVLAANPASQSGAAPQAHIPG
LQILNIALPALIPSVSQVPVDAHGAPELPVSQSKARDTQPKQTDVAPANQGSRTESPQGS
PGAPPEPPVPEGAGAAGAEHQTPRPELPSAQGQPAAPDSQAPRPAPPPRRPPAAPLSDAS
SDDEDRLVIAT
NT seq
7956 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaacaaaacagattcaccctagaaatctacgagggctgcattctgtgcaaaca
ttgcggagtgcacttgcacagacgtggatgggtggcacagagccctccctgcacctggtg
gcgtgtcactgtaccgagtacctgagacagttgtcatacagtggtgttcagtgtctgcat
ggactaagagtgcagaaacaatacggtgtaaaagacaaaattgaagaagcacaaaaagaa
ctgaacggggcagaagtttcaaaaaaagaaatcctagaggctggtattaaaggggcttcg
gaatccctcaaaggtgtgaaacggaagaagattgtagccgagaatcacctgaaaaagata
ccaaagtccccgctgaggaaccctctgcaggcgaaacagaaacaaaacacagaggaggca
gccttcgctgcccctcagggcgctgcgggggcgcagaggaggcagaaccccctctctgta
aagaacgggaagcagctcaccaggcagaatggggacgcacctgcgatagccgccgaggac
agcgtctcccccaagaagcccccgtttgtccagcacgcggcggagctgcgcaggtggagg
tcggagggccccgggccggccagggtcggcgtcctcgatggcaaacgggactccccggca
ggcgcggccaggcccgcgggccgagatggtggcgcctcgccttgcagagcgccctcccca
ccctacaccgcgaccgctttcgatgtgctactgaaggccatggagccggagctgagcacc
ttgtcacagaagggctccgcgggtgcaatgaaggctgaaaaaccacgagccagcaaaacc
ggacggtcgccttccaggttaaaaaccagctccgtggacgcccctggccagcccgcgtgc
gagtcagccgctggaccccagcctgctccgggggccttgtttgccgcacacgtggccact
gtacagcaggaacaggcaccagcccagcccgcgtctcggccctacagtcggcacgaacac
ttcgtctcccagcccagccagcatcaccaacagcttcccggatgctccgggttcgtggga
gcgcagccgacgctgcaaagtcgggagaacgccaaccttgagcaagtgcataacaccacg
gtgacgtcatctgtgggccccccctgcccttccagaactcaggttacaccccaaagccag
cacctggaggtcgcggcgcctctgtccgttagtccagtcacttccgcccagtcgcccccc
gcacccgtttacaactcagtggtgaatcaaagcgtcgagcagatgtgcaaccttcttcta
aaggaccagaagccaaaaaagcaagggaagtacatctgtgagtactgcagcagagcctgt
gccaagcccagcgtgctcctgaaacacatccgctcccacaccggggagcgcccctacccc
tgtgtgacctgcgggttttcatttaagaccaaaagcaacctgtacaagcacaaaaagtcc
cacgcacacaccatcaaactgggcctcgtcttgcagccagatgctggcggcttgttcctg
tcccaggagtcccccaaagccctgagcatccactcggatgccgaggacagcggggagagc
gaggaggagggtgcccccgaagagagaccgagcgaccctggtgccatgaagctgcagccg
gtgcaggtgacgaagaggctgtcaggcactgaggctttactggcctcgagttctgtcctg
ggccgcgcagaccgtgcagtggacagatctgcagagtctgtgacggacttacccaaagtg
gtggtccaccccagcaccgtgtcccccgcgaggactgacgccccgaaggccgtcagcccc
aagcttgaacttgtgagtgcccagaggcacaaggagctccaggtcccacacgtgctgtca
ccctcggccggcgcgagccccctcgagatggacgagcagtcccaccggaaaggggacgcg
agccagccggagggcaaagcagacgctgcagcggggacagcgcacgcccagctccagagg
cagcaggccaccgactgctcgcaggagcagcagggaaagctgctgagccctcgcagcctg
gggagtacggactcgggctatttttcccgctccgaaagcgccgatcaggcggtgagcccg
cccacgccctttgccaggacgctcccagcccccgagcaagacgccagcaaggctgctggg
ctgcccgggcctcgcggcagcgcgcctgcaccctctgctttcccgccgggggacaggggt
cagctcttgccaggtcagatgcgcccaccgctggcgacaaagaccctggaggagcggatc
tccaagctcatctcggacaatgaggccctggtggacaacaagcagctggacagcgtcaag
ccccggaggacgtcgctctcgcggcgggggagcatcgactcccccaagtcgtacattttc
aaggactctttccagtttgatttgaagccaatggggcggaggacgagctccagctcggac
atccccaagtccccgttcacccccaccgagaaatccaagcaggtgtttcttctgtccgtc
ccttccctggactgcttgccgatcaccaggagtaactccatgcccaccacgggttactcg
gcggtccctgcaagcatcatccctcccccacatcctctgcgaggaagccagtcgttcgat
gacaagatcggcgcgttctacgatgacgtcttcgtgtctggccctaacccctccgtgccc
cccagcggccacccccgcacgctggtcagacaggcagcggtggaagacgcatccgcaggg
gaccaccaggcgctcggccccgggcagccctcggaggagagcctacacggctgccaggcc
gccggcgaaggtgtggcagcggccaggggcaaggcgccggccccaggcgcgcacccagaa
aagaagaagtcccaccaagggcgggggacgatgtttgagtgcgaaacctgcagaaacagg
taccggaaactggagaactttgaaaaccataagaaattttactgctcggagttacatgga
ccgaagaccaaggtggccctgagggagccagagcagagcctggtggctggcggcgcgcag
cctcagatgctgcactaccgagtggccggctccacaggcatctgggagcagacgccgcag
gtcaggaagaggcgcaagatgaaaagcgtgggcgacgaggaggagctccagcagacagat
ggcggggcagccccgcagagctgcgaggcccccgcgtctcagagcgccctgggctccgcg
cccgccgcggcccccacgcgggagccccagcgcagaagcacacacctgcagagctcccag
gtccagctggcagccaggggcctcgaccagcccgcggacgcgaagctgaccaccatcgcg
gagcagcacctgggcccggccgccatggacaagggcgagctggcaaggatcgggagtggg
atctcggtcatccagcacaccaactccctgagcaggcccggctcgcttgacaagcccgag
ccttctgaaggcgggccccccgggtccctccaggagctgggcaggacgggcaagcccggg
gctctgaaggtagtagggggctcccaagaggaagcccacccttctcgcgaagcggcgccc
cttgcccagcccgcgccagcggggcccctcagaggagagccgcaggagggctccaggaag
atgtctggtgagcggcacgtgttgggacagccctcgagacttgtccggcaacacaacatc
caagtcccggaaattctggtcaccgaagaaccagatcgggacctggaagcccagagccac
gacccagaaaaatccgagaagttcagctggcctcagcgcagcgagaccctgtccaagctg
cccaccgagaagctgccgcccaagaagaagcggctgcggctggccgagatggagcgctcc
tccacggagtcgagtttcgactccaccctgtccaggagcctcagcagggacagcagcttg
tcgcacacgtcaagcttctcggcctccttcgacacggaggacgtctcgcccaaagccgag
tgtctaaataaagcggagtttcttttgattccgcccgcctccaatactctgagcgttccc
ggcggtccccgggagatgaggcgcgcagcctcggagcagatcggttgcgtgcagacgtcc
atggaggtctcggatctcagaagcaagtcctttgactgtggaagtgtgactccgccccgc
ccggcccggctcccgctccgggagccacagccttctgcctcccccgggcacgtgccactc
ttggagaggcggcgtggcccgctgatccggcagatttccttaaacatagctcccgaaggg
ctttcctcttcctcgccagcacacccagccagcacagtgccgcttctggtccccgcactc
cccgcaccgcctctgcccgagttccccgcaccaggtaaggacctgcggccagaagcagcg
aattccggctccagtagcatccttcccgggcaacagattttcggcaccaatctgctaaat
cgaagccatgcacccctcagccgccagaacgctcagtcggccccgcacgtgtcttcacag
ggcgaccacccaggtgcaggtcctggtccacgagacgcctccaaaaacgaggactgcttt
gctcccaaataccagcttcattgtcaggttctggcttcaggcaagtcttccccctccagt
cccgcccacgctttgccaaatcaagccctgtccgatccagccggagtggatcatggcgcc
atggcggcggtgttacccagcgagttaggagatctcaggtcaaggtcatgtcctcgcccc
ccgccggagctggggcccctgggcggtcaggggcagaaggtgccgccctccttcgtcctg
cctgtgcctcttcatggcagtgtgcccgcctactgtttccctgccgtgacctctctgcca
caaatcctagtgacccaggatttgtccagtcagccaatttgccaggctaatcctagtatc
gtgccagtcagcgaagagctgaactccgtgccaagatcacaaaaggatgagcagacggct
ttgccaaactccaagaaggaacttgtctgcgatcttgctttctcagagccgggcccgagt
cctgtcttggaatcctcagccctgactccgaagatgtccgtgggcaggctttccccccag
caggagtcttcagcttccagtaaaaggatgctctccccggccaacagtttggacattgcc
atggagaaacaccagaagcgggcgaaagatgaaaatggagccgtgtgtgcccccgaggcc
aggccgcccgagccaccgagttccagagccggtgaggtcaacaagcagaagaaacccgtc
ctggtgaggcaggtgtgcaccaccgagcccctggatggcgccgccgccgcggcggaacag
ggggcgttttctcaacccgacgttagcagcggcgcgtctgttcatttgacggatgttttg
ccggctgatagttcctcctcgggacccgtaagtgaagcgcaggagtctgagagcatcaag
tcccccgcaccctcaggaaattctcccgtccgtccagaaaccactcacgtttctcctcca
cagtgcgcacgtggtgaccaagaaaggaagtccccaggggtccgagtgaccggccaagat
ccaaggcagctagcagggaccactctcccactgggtgacaccagggacacgcagcagctg
gccttccccagcctcaagacggcaaccggctttacgtggtgttacctgtcaaggcggaag
tcactgccgtggcctcagcgtgaccagaggacgtcggcctattccgactggaccgtcagc
tccagggatccaaacccacttggtttgcctacaaaggttgctctttctcttcttaactcc
aagcagaagactggaaaatcgctgtattgtcaagcaataaccacccattcaaaatcagat
ctgttggtctattcgagcaagtggaaaagcaacttaggcaagagagcattaggtaatcaa
aagtccacagtagttgaattcagcaataaagatgcctctgaaattaacagtgagcaagat
aaagaaaattccttaatcaaaagtgaaccgagaagaattaaaatatttgatggaggatac
aaatcaaatgaagagtatgtctatgtccgaggcaggggaagaggaaagtacatttgtgaa
gaatgtggaatacgttgtaagaaacctagcatgttaaagaaacacatacggacccacaca
gatgtccgcccctaccactgcacttactgtaacttctcctttaagaccaaaggaaatctg
acaaaacacatgaagtccaaggcacatagcaagaaatgtgtggatttaggcgtctcagta
ggtttaatagatgaacaagatacagaagaatcagatgaaaagcagaggttcagttatgag
cggtccggctatgacctggaagaatcggatggccccgatgaggaagagaacgagaacgaa
gatgatgacgaagacagccaggccgagtcggtcctgtcggccgcaccctcggttccagcc
agcccccagcaccttccctgccgaggcggcctgccggagccggtgagcgctgacgaggac
agcaggacgcccgactgctgctcggggctgcacgccgaccccatggacgtgctgccccgg
gcgctgctcaccaagatgacggtgctgagcgccgtgcgatccggctgcggccggaagacg
gactcaccagtgaaggccaggctgcctgctgccaaggacgagggccgggggccgcctggt
gcagaccccgcccccagagctgcgccgcggtccccgtgtcggcagatgtccgtggactac
cctgaagcagaggaaattctcagcagtcctgcggcgggaaagaacttgtcccctgcggga
ctgcccgccgccagcccgcacagcccctcgcctgcagcgggggtgccggcccaggcctcg
cctcgtccggacacacaagagcagaagcagcaggccacgcagcgcccgactcccggctca
ccctcgccctcgccccagacgcacctgttcagccacctgccgctgcattcgcagcagcag
tcccgaacaccttacaacatggtccccgtcgggggcatccacgtggtccccgccggcctc
acctactccacctttgtacccattcaggcggggcccatgcagctggccatccccgccgtg
agtgtcctccacaggaccatgggcacccctgcggatgctgcggcagaagcgcccggcacc
gcgcagccccccagcagcgtcgtgccctgcattcccattggccagatccgggtgcctggc
ctgcagaggctgaggccgccgggcagcctggagacggtcagcatcgtgggcctggccggc
ggcagcgtgggcccacaggtgcagccgccgggcctggcgctcaacgccgtggggctgcag
gttctggccgcaaaccctgcctcgcagagcggcgccgccccgcaggcccacatccccggg
ctgcagatcttgaacatcgccttgcctgcgctgatcccctcggtcagtcaggtgcccgtg
gacgcccacggggcccccgagctgccagtctcccagagcaaagcgcgcgacacacaaccc
aagcagactgatgtagcccccgccaaccagggcagcaggaccgagtctcctcaggggtcg
ccgggagccccgccggagccacctgtgcccgagggcgcaggtgcagcgggcgcggagcac
cagacgccccggccggagctgccgtcggctcagggccagccggcagccccggacagccag
gcgccccggccggcgccgccaccccgcaggccgcccgccgcaccgctgagcgacgccagc
agcgacgacgaggaccggctggtgatcgcgacctag
DBGET
integrated database retrieval system
