Oryctolagus cuniculus (rabbit): 100338720
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Entry
100338720 CDS
T03373
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100338720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocu04812
]
100338720
Cytoskeleton proteins [BR:
ocu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100338720
Intermediate filaments
Intermediate filament-binding proteins
100338720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
100338720
NCBI-ProteinID:
XP_051694891
Ensembl:
ENSOCUG00000005008
LinkDB
All DBs
Position
2:complement(131816773..132029316)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEGMIAEEHFGSEKIRERIV
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQASALPQEHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTSLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
TQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQQWDTSRGEQVSQNGLPAEQGSPRMADTADTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTGLPPQSAATLPARTQEMPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEALCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKYEVSASTQSTPASSRAQTLPTSVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaccgtagccacagactacgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggatgactgggacaacgagaacagctctgcacggctcttt
gagcgatcccgcatcaaggctctggccgatgagcgtgaagctgtgcagaagaagaccttc
accaagtgggtcaactcccacctggcccgggtgtcctgccgaatcacagacctgtacact
gaccttcgagatggccgaatgctcatcaagctgctggaagtcctctctggagagagactg
cctaaacccacgaaggggcgaatgcgcatccactgtctggagaacgtagacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacattgtggat
gggaaccaccggctgacactcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtggaaactgaagacaacaaagagaagaaatctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctgggtaccccaatgtcaacattcataatttcaccact
agctggagggacggcatggccttcaacgcactgatacacaaacaccggcccgacctgata
gattttgacaaactaaagaaatccaatgcacactacaatctgcagaatgcgtttaacctg
gcagagcagcacctcggcctcactaaattgttggaccctgaagatatcagtgtggaccac
cctgatgagaagtccatcatcacctacgtggtgacttactaccactacttctctaagatg
aaggccttggctgttgaaggaaaacgaatcggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgacctcctggagtggattgaacaa
accatcattattctgaacaaccgcaaatttgccaattcgctagtcggggttcaacaacag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttaccgagaagggg
aacctggaagtgctgcttttcacaattcagagcaagatgagggccaacaaccagaaggtc
tacatgccccgggaggggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacacgagagagaactggccctgcggaacgagctcatcagacaggagaaactg
gaacagctcgcccgcagatttgatcgcaaggcagctatgagggagacttggctgagcgaa
aaccagcggctggtgtcccaggacaactttggatttgatctgcctgcagttgaggctgca
acgaaaaagcacgaggccatcgagacagacattgccgcatacgaggagcgtgtgcaggcc
gtggtggctgtggccagagagctggaggcagagaactaccacgacatcaaacgcatcaca
gccaggaaggacaatgtcatccggctctgggaatacctgctggaactgctcagggcccgg
aggcagcgcctcgagatgaacctggggctgcagaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaagcacttg
cttggcgtagaagacctgttacagaagcacgccctggttgaggcagacattggcatccag
gctgagcgtgtgagaggggtgaacgcctctgcccaaaagtttgcaacagatggagaaggt
tacaagccctgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgctat
caagagctttgccagttggcggccgagcgccgggcccgtctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgagagaaggagaagatc
ctgtcctctgacgattacgggaaggacctgaccagcgtcatgcgccttctcagtaagcac
cgagcatttgaggacgagatgagtggccgcagcggccactttgagcaggccatcaaagaa
ggtgaaggcatgatcgcggaggagcactttggatcggagaagatccgcgagaggatcgtt
tacatccgggagcagtgggccaacctggagcagctctcggccattcggaagaagcgcctg
gaagaggcctcactgctgcatcagttccaggcggatgctgacgacatcgacgcctggatg
ctggacattctcaagattgtctccagcagcgacgtgggccacgacgagtactccacccag
tctctggtcaagaaacacaaagacgtggcggaggagatcgccaactacaggcccaccatt
gactcgctgcacgagcaggccagcgccctcccccaggagcacgcggagtccccagacgtg
cggggcaggctggctggcatcgaggagcgctacaaggaggtggcggagctgacgcggctg
aggaagcaggcgctccaggacaccctggccctgtacaagatgttcagcgaggccgatgcc
tgtgagctgtggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaggtcatccagcacagatttgagagcctagaaccagaaatgaacaac
caggcttcccgggttgcagtggtgaatcagattgcacgccagctgatgcacagcggccac
ccgagtgagaaggagatcaaagcccagcaggacaaactcaacacgaggtggagtcagttc
agagagctggtcgacaggaagaaggatgctctgctgtctgccctgagcatccagaactac
caccttgagtgcaacgaaaccaaatcctggattcgggaaaagaccaaagtcatcgagtct
acccaggacctgggcaacgacctggccggcgtcatggccctgcagcgtaagctgacgggc
atggagagagacttggtggccatcgaggcaaagctgagcgacctgcagaaggaggcggag
aagctggagtccgagcaccccgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccaccctgaaaaaccgagaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acccagacagccatcgcctcggaagacatgcccaacaccctgactgaggccgagaagctt
ctcacccagcatgagaacatcaaaaacgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagacagacgcccagtacatgtttctg
cggcagcggctgcaggccttggacaccggatggaacgagctccacaaaatgtgggaaaac
aggcagaacctcctctcccagtcacacgcctaccagcagttcctcagggacacgaagcaa
gccgaggcctttcttaacaaccaggaatatgttttggctcatactgaaatgcctaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgactaccatggatgcc
aatgaggagaagatcaatgctgttgtggaaactggccggaggctggtgagcgatgggaac
atcaactctgatcgcatccaggagaaggtggactctatcgacgacagacataggaagaat
cgggaggcagccagtgagcttctgatgagactaaaggacaacagggatcttcagaaattc
ctgcaggattgtcaagagctatctctctggatcaatgaaaagatgctgacagcccaggat
atgtcatacgatgaagccagaaatctgcacagtaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagagaagcccgagacagaagctgtggtcaaggagaagctcaccagtctacataaa
atgtgggaagtccttgagtccaccacccagaccaaggcccagcggctctttgatgccaac
aaggctgaactcttcacccagagctgtgcagatctagacaaatggctgcatggcttggag
agtcagatccaatctgacgactatggcaaagacctgaccagtgtcaacatcctgctgaaa
aagcaacagatgctggagaatcagatggaagtgcggaagaaggagatcgaggagctccag
acccaggcgcaggccctgagtcaggaggggaagagcaccgacgaggtggacagcaagcgc
ctcaccgtgcaaaccaaattcatggagttgttggagcccttgaacgaacggaagcataac
ctgctggcctccaaagagatccatcagttcaacagggacgtggaggatgagatcctgtgg
gttggtgagagaatgcctttggcaacttccacggatcatggccacaacctccagacagtg
cagctcttaataaagaaaaaccagaccctccagaaagaaatacagggacaccagcctcgc
atcgatgacatctttgagaggagccaaaacatcgtcacagacagcagcagcctcaacgct
gaggccatcagacagaggctcgccgacctgaagcagctgtggggcctcctcatcgaggag
acggagaagcgccacaggcggctcgaggaggcccacaaggcacagcagtactactttgac
gcggctgaggccgaggcgtggatgagtgaacaggaactgtatatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaaaaagcaccagattttggaacaagct
gtggaggactatgcagagactgtgcatcagctctccaagaccagccgggccctggtggcc
gacagccatcctgaaagcgagcgcattagcatgcggcagtccaaagtggataagctgtac
gctgggctgaaggacctggccgaagagagaagaggcaagctggatgagaggcacaggtta
ttccagctcaaccgggaggtggacgacctggagcagtggatcgccgagagggaggtggtt
gcagggtcccacgagctggggcaggactatgagcacgtgacgatgttacaagaaagattc
cgggaatttgcccgagacacagggaacattgggcaggagcgcgtggacacggtcaatcac
atggccgatgaactcatcaactctggacattcggatgctgccaccattgctgagtggaag
gatggcctcaacgaagcctgggcagacctcctggagctcattgacaccagaacacagatt
ctggccgcctcctacgaactgcacaagttttaccatgatgccaaggagatctttggacgc
atacaagacaaacataagaagctcccagaggaacttgggcgagatcagaacacagtggag
accttgcagagaatgcacaccacctttgagcatgacatccaggccctgggcactcaagtc
aggcagctgcaggaggacgcagcccgcctccaggcggcctatgcaggtgacaaggctgac
gacatccagaagcgtgagaacgaagtcctagaagcctggaaggctctgctggacgcctgt
gagggccgcagggtgcggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgtgacctcatgctatggatggaggatgtcattcggcagattgaggcccaagagaagccc
agggatgtatcctctgtggaactgttaatgaacaatcatcaaggtatcaaagctgaaatc
gatgctcgtaatgacagtttcacaacctgcattgaacttgggaaatccctgttggcgaga
aaacactacgcttctgaagagatcaaggaaaagttactgcagctgacagaaaagagaaaa
gaaatgatcgacaagtgggaagaccggtgggagtggttaagactgattctggaggtccat
cagttctcaagggacgccagcgtggctgaggcctggctgctcgggcaggagccctacctg
tccagccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccacgag
gcatttgaaaagtctgcagccacctgggacgagaggttctccgccctggagaggctgacg
acgctggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccttctcccgagccaagcacaaaggtgtcagaggagaccgagtcccagcaacagtgggat
acttcaagaggagaacaagtttcccagaatggtttgccggctgaacagggatctccacgg
atggcagatacggcagacacgagcgaaatggtcaatggcgctgcagaacagaggacgagc
tccaaagagtccagtcccatcccctcccccacctctgatcgcaaagccaagactggcctc
ccgccccagagtgctgccaccttaccagccaggacccaggagatgccctcggcgcagatg
gaaggcttcctgaaccggaagcacgagtgggaggcccacaacaagaaggcctcgagcagg
tcctggcacaatgtgtactgtgtcattaataaccaggagatgggtttctacaaagacgcc
aagactgctgcatccggcattccctaccacagcgaggtgcccgtgagcttgaaggaagcc
ctgtgcgaagtggccctcgattacaagaagaagaaacacgtattcaagctaagactgaat
gacggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctcggccatctcctcggataagtacgaagtgtccgccagcacccagagcacg
ccagcgtccagccgggcacagaccttgcccaccagcgtcaccatcaccagcgagtccagt
cccggcaagcgggagaaggacaaagaaaaagacaaagagaagcggttcagcctctttggc
aaaaagaaatga
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integrated database retrieval system
