Oryctolagus cuniculus (rabbit): 100338927
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Entry
100338927 CDS
T03373
Name
(RefSeq) sorting nexin-1 isoform X1
KO
K17917
sorting nexin-1/2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100338927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338927
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100338927
Membrane trafficking [BR:
ocu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
100338927
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100338927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
MVD-like_N
HR1
Motif
Other DBs
NCBI-GeneID:
100338927
NCBI-ProteinID:
XP_002718200
Ensembl:
ENSOCUG00000005449
LinkDB
All DBs
Position
17:complement(9093173..9137881)
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AA seq
522 aa
AA seq
DB search
MATGGGGCSASERLPPPFPGLESESEGAAGGSEPEAGDSDTEGEDIFTGAAAANKPRSPK
RITSILPINNGSKENGIHEEQDQEPQDLFADATVELSLDSTQNNQKRVPAKTLISPSPQE
AAHSSKPQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKQ
FAVKRRFSDFLGLYEKLSEKHSQNGVIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRIVNHPTMLQDPDVREFLEKEELPRASGTQTLSGAGLLKMFNRATDAVSKMTI
KMNESDFWFEEKLQEIECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQASSDFFLLAELLSDYVRLLAVVRAAFDHRMRTWQRW
QDAQATLQKKREAEARLLWANKPDKLQQAKDEITEWESRVTQYERDFERISAVVRKEVIR
FEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtggtggcggctgtagcgcatcggagagactccctccacccttcccgggc
ctggagtcggagtccgaaggggccgccggggggtcagaacccgaggccggggacagcgac
accgagggggaggacattttcaccggcgccgcggcggccaataagccccgttctccaaag
agaatcacatccattcttcccatcaacaatggctccaaagaaaatgggatccatgaggaa
caagaccaagaaccacaggatctctttgcagatgccacagtggagctttccctggacagc
acacaaaataatcagaagagggtgccggccaaaacgctcatttctccttctccacaggaa
gctgcacattcttctaagccccagccaagctatgaggagctggaggaagaagaacaggag
gaccagtttgatttgacagttggtataactgatcctgagaagataggggacgggatgaat
gcctatgtcgcctacaaagtcacaacacagacgagcctaccaatgttcagaagtaaacaa
tttgcagtaaaaagaagatttagtgactttctgggtctatatgaaaagctgtcagagaaa
cattctcagaatggcgtcattgtccctcctccacccgagaagagcctaataggaatgacg
aaagtgaaagtggggaaggaagattcttcctctgcagaatttcttgaaaaacgaagggcc
gccctagaaaggtaccttcagaggattgtgaaccatcctaccatgttacaggatcctgat
gtcagggagttcttggaaaaagaagagctgccacgcgcctcgggtacccagaccctgagt
ggggctggcctcctcaagatgtttaacagagccacggacgcggtcagcaagatgaccatc
aagatgaacgagtcagacttttggtttgaggagaagctccaggagatagagtgtgaggag
cagcgcttacggaaactgcatgctgttgtagaaactctagtcaaccataggaaagagcta
gcgctgaacacagcccagtttgcaaagagtctggccatgctcgggagctccgaggacaac
acggccctgtcacgggcactctcccagctagccgaggtggaagagaaaatcgagcagctc
caccaggaacaggccagcagtgacttcttcctcctggcggagctcctcagtgactacgtt
cgcctcctggccgtcgtccgcgctgccttcgaccatcgcatgaggacgtggcagcgctgg
caggacgcgcaggccacgctgcagaagaagcgggaggctgaggctcggctgctgtgggcc
aacaagcccgacaagctgcagcaggccaaggacgagatcacagagtgggagtctcgcgtg
acccagtatgaaagggactttgaaaggatctcagcagtggtccgaaaagaagtgatccgg
tttgagaaagagaaatccaaggacttcaaaaaccacgtcatcaagtacctggagacgctc
ctgtactcacagcagcagctggcaaagtactgggaagccttccttcctgaggccaaggct
atctcctaa
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