Oryctolagus cuniculus (rabbit): 100338943
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Entry
100338943 CDS
T03373
Name
(RefSeq) transcription factor SPT20 homolog isoform X6
KO
K21245
transcription factor SPT20 homolog
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100338943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100338943
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100338943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
100338943
NCBI-ProteinID:
XP_008271784
Ensembl:
ENSOCUG00000008436
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MQQALELALDRAEYVIESARQRPPKRKYLSGGRKSVFQKLYDLYIEECEKEPEVKQKIRR
NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGNQYQKTRLTILQSLG
DPLYYGKIQPCKADEESDSQMSPSHCSTDDHSNWFIIGSKTDAERVVNQYQELIQNEAKC
PIKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
YFTPQQASSFLKSPTPPPSSKPRSLSRKSSVDLSQVSMLSPAALSPASSSQRSGTPKPST
PTPTPSSAPHPPDAQSSTPSTPSATPTPQDSGFTPQPTLLTQFAQQQMSLSQALPVTTIP
LSTMVTSITTGTTANQVMANSAGLNFINVVGSVCGAQALMSGSNSMLGCNTGAITPAGIN
LSGLLPSAGLLPNALPSAMQAASQAGVPFGIKNTSNLRPLNLLQLPGGSLIFNTLQQQQQ
QQQQQQQQQQQQLSPFTPPTPQQPTTASPQQPGEQGSEQGSTSQEQALSAQQAAVINLTG
VGNFMQSQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAA
AAQTAQLHHHQHTGSQSKSKMKRGTPTTPKF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagctttagaactagctttggatcgtgcagagtatgtcattgaaagtgcccga
cagagacctcctaaaaggaaatacctatctggtggaagaaaatctgtatttcaaaaactc
tatgatttatatattgaagaatgtgaaaaagagcctgaggttaagcagaaaataagaaga
aatgtgaacttgttggaaaagctcgttatgcaagagactttgtcatgtttagtggtcaat
ctttatccaggaaatgagggatattctctgatgctcaggggaaaaaatggatcagattct
gagaccattcgactgccttatgaagaaggggaattgcttgaatacttggatgcagaagaa
ttacctcctattttggttgatcttctagaaaaatctcaggttaacatttttcactgtgga
tgtgtcatagcagaaatacgtgactataggcagtccagtaatatgaaatctcctggttac
caaagtaggcacattcttttacgtccaacgatgcagactttaatctgtgatgtacattca
ataacaagtgataaccataaatggacccaggaagacaaacttttacttgagagccaactg
atcctagcgacagctgaaccactgtgtcttgatccttctatagctgtaacctgcactgca
aacagactgctttataacaagcaaaagatgaacactcgcccaatgaaacggtgtttcaag
aggtattcgaggtcctctctgaaccggcagcaggatctgtctcattgtccacctcctcct
cagctgagattacttgatttcttacaaaaaagaaaggaaagaaaagcaggtcaacattat
gacctcaaaatttctaaagcaggaaattgtgtagatatgtggaaacggagcccatgtaat
ttggccataccttctgaagtggatgtagagaaatatgctaaagtagaaaaatctattaaa
tctgatgattcacaaccaacagtctggccagcccatgatgtaaaagatgattatgtattt
gaatgtgaagctggtaatcagtatcagaaaacaaggctgaccatcttgcagtcacttggt
gatccactttactatggtaaaatacagccatgtaaagcagatgaagaaagtgacagccag
atgtctccatcccactgctccacagatgatcattcaaattggttcattattggttcaaag
acagatgctgaaagggtggtcaaccagtaccaggaattgatccagaatgaagccaaatgt
ccaatcaagatgtctcacagctccagtggctcagccagtctgagtcagctttctccaggg
aaagaaacagaacagcctgagaccgtgtcagttcagtcttcagtactgggcaaaggagta
aaacatcgacctccacccattaaacttccttcaagctcaggaaatagttcctcaggtaac
tactttacaccacagcaggcaagcagtttccttaaatctccaactcctcctccatcttct
aagccacgaagtctttctcgcaagtcttctgtggatctcagccaagttagcatgctttct
ccagctgccctgtcacctgccagctcatcacaaagatctggaactcctaagccatctact
cctacaccaaccccttcatcggccccacaccctcctgatgctcagagttcaactcctagt
accccttcagccacccctactccccaagattcaggcttcacccctcagcccactttgtta
acccagtttgctcagcagcaaatgtctctgagccaggcattgcctgtaacgaccattcct
ctttccaccatggtaacatctataactacaggaaccacagccaaccaggtcatggcaaac
tctgctggacttaacttcatcaatgtagtgggctctgtttgtggggctcaggctttgatg
agtggttcaaactccatgctgggctgtaacactggtgccataactcctgcaggaatcaac
ttgagcggccttctcccctcagcaggtctgctaccaaatgcgctgcccagtgcaatgcag
gcagcttctcaagcaggtgttccatttggtataaaaaatacatcaaatctcaggccctta
aatctacttcagcttccaggtggttcactcatttttaacaccctgcagcagcagcagcag
cagcaacagcagcagcagcagcagcagcagcagcagctctctccgtttacaccaccaacg
cctcagcagcccaccactgctagtcctcagcagccaggggagcagggttctgaacagggt
tcaaccagtcaagaacaggccttatctgctcagcaagctgctgttattaaccttactgga
gtaggaaattttatgcagtcacaggcagctgtgttgtctcagcttggctctgccgagaac
agacctgagcaaagccttcctcagcagagattccagctctcctctgcctttcaacagcag
cagcaacaaatacaacagttgcgattcttgcagcatcaaatggctatggcagcagcagca
gcagcacaaacagctcagctacatcatcatcagcatacaggcagccagtcaaaaagtaaa
atgaagagaggcacgcctaccactccaaaattctga
DBGET
integrated database retrieval system
