Oryctolagus cuniculus (rabbit): 100339006
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Entry
100339006 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100339006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100339006
04121 Ubiquitin system [BR:
ocu04121
]
100339006
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100339006
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100339006
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100339006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
100339006
NCBI-ProteinID:
XP_051674494
Ensembl:
ENSOCUG00000007612
LinkDB
All DBs
Position
14:21031520..21095546
Genome browser
AA seq
869 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLETHRLPAAGSGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAGAHSNHRHHAHHPHPRAPAAAPPPPPAPAPAPSRPTPGGGG
GGGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQQHGDEVLHLYCDTCSVPICR
ECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKV
AQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQHLSKLESTISAVQ
QVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVS
SGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAE
VSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSE
GDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGV
ACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDT
RNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQ
SARFLGSEGTGNGQFLRPQGVAVDQEGRIVVADSRNHRVQMFESNGSFLCKFGSQGSGFG
QMDRPSGIAITPDGMIVVVDFGNNRILIF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtccgcgtcgtcctcgtcctcgcagacgtccacg
tcgtccgggggcggcggcgggggccccggggcggcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccctgcctggagacacaccggctgccggcggcgggcagc
ggcgcgccgggagagccgctcaagctgcgctgccccgtgtgcgaccagaaggtcgtgctc
gccgaggcggcgggcatggacgcgctgccctcgtccgccttcctgctcagcaacctgctg
gacgccgtggtggccaccgccgacgagccgccgcccaagaacggccgcgcgggcgcgggc
gcccacagcaaccaccggcaccacgcgcaccacccgcacccgcgcgcgcccgccgccgcg
ccgccgccgccgccggcgcccgcgcccgcgccttcccgcccgactcccggcggcggcggc
ggcggcggcggcccggccgcgtccccgtcggcgctgctgctgcggcggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcctcgcgctgcctggactgccaggagcacctg
tgcgacaattgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggaccactacatcgag
cgcggcccgccgggccccgcggccgcggccgcggcgcagcagctcgggctcgggccgccc
ttccccggcgcgcccttctccatcctctccgtgttcccggagcgcctcggcttctgccag
cagcacggcgatgaggtgctgcatctctactgtgacacttgctccgtgcccatctgtcgc
gagtgcaccatgggccggcacgggggccacagcttcatctacctccaggaggcgctgcag
gactccagagcgctcaccatccagctgctggccgacgcccagcagggccgccaggcgatc
cagctgagcatcgagcaggcccagactgtggctgaacaggtggagatgaaggcaaaggtg
gctcagtcggaggtgaaggccgtcactgcaaggcacaagaaggccctggaggagcgcgag
tgcgagctgctgtggaaggtggagaagatccggcaggtgaaggccaagtctctgtacctg
caggtggagaagctgcggcagcacctgagcaagctggagagcaccatcagcgccgtgcag
caggtgctggaggagggcagggcgctggacatcctgctcgcccgagaccggatgctggcc
caggtgcaggagctgaagaccgtgcgcagcctgctgcagccccaggaggacgaccgcgtc
atgttcacgccccccgaccaggccctgtaccttgccatcaagtcctttggcttcgtcagc
agtggggccttcgcgcctctcaccaaggccaccggcgatggcctcaagcgggccctgcag
ggcaaggtggcctcgttcacggtcatcggctacgaccacgacggtgagccgcgcctctcg
ggaggggacctcatgtcggccgtggtcctgggccctgacggcaacctgttcggcgcggag
gtgagcgaccagcagaacgggacgtacgtggtgagctaccggccgcagctggagggcgag
cacctggtgtcggtgaccatgtgcaaccagcacatcgagaacagccccttcaaggtggtg
gtcaagtcgggccgcagctacgtgggcatcgggctcccgggcctgagcttcggcagcgag
ggcgacagcgacggcaagctgtgccgcccctggggcgtgagcgtcgacaaggagggctac
atcatcgtggccgaccgcagcaacaaccgcatccaggtgttcaagccctgcggctccttc
caccacaagttcggcaccctgggctcccggcccgggcagttcgaccggcccgccggcgtg
gcctgcgacgcctcgcgccggatcgtggtggccgacaaggacaatcatcgcatccagatc
ttcaccttcgagggccagttcctgctcaagttcggggagaagggcaccaagaacgggcag
ttcaactacccttgggacgtggcggtgaactccgagggcaagatcctggtctcggacacc
cggaaccaccggatccagctgttcgggcccgacggggtcttcctgaataagtacggcttc
gagggcgccctctggaagcactttgactcgccgcggggtgtggccttcaaccacgagggc
cacctggtggtcaccgacttcaacaaccaccggctcctggtcatccaccccgactgccag
tcagcgcgcttcctgggctcggagggcacgggcaacgggcagttcctgcgcccgcagggc
gtggccgtggaccaggaggggcgcatcgtcgtggccgattccaggaaccaccgggtccag
atgtttgagtccaacggcagcttcctgtgcaagttcggctcccagggcagcggcttcggg
cagatggaccgcccgtccggcattgccatcacccccgacggcatgatcgtggtggtagat
ttcggcaacaatcgaatcctcattttctaa
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