Oryctolagus cuniculus (rabbit): 100339094
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Entry
100339094 CDS
T03373
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100339094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100339094
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100339094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100339094
NCBI-ProteinID:
XP_051682179
Ensembl:
ENSOCUG00000010182
LinkDB
All DBs
Position
20:29728272..29766731
Genome browser
AA seq
1547 aa
AA seq
DB search
MGMWTLERSNENYEIMNVSLDVKSVAPSVSFVICLEIRGQRRKPVPGIPTSCLPAMIKCL
SVEVQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRVNMETYQVQVIDNGFGMGSVD
VDKVGNRYFTSKCTSVQDLENPRFYGFRGEALASIADMASTMEISSKKNRTMKTFVKLFQ
NGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCMDPRLEFEKVRQRIEALSLMHPSI
SFSLRNDVSGSMVLQLPKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGYISSEAHY
NKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSSPRHRSTPELYGI
YVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVKLFLKQEKLFVELSGEDIKEF
NEDNDFNLFGTTLQKHVTSDEKCGQGSFQEACNNILDSYEMFNLQSKAVKRKVTIENINT
ENSKGSEAIRKKTHDSFLSTHESDGPLRNKMAESSLLNDNSCPDSRMLEQETVEASDTRE
NIEHKTCLEPNSLEDPHRATSEEFSNAFQTYHLEKNEEDLEVQKESMTVNGVAANILKNN
TMQNQLERLGDATAMGCQPLSFETTLLNVHSAQGEKEKRKAEPGDCGGRSNFSYGQVKLC
STGFITHVVQSEVTQPTGAEPTFKNYVRPGPASAQEMFGSGTRHSVETPDVRDLTSILSK
EPAQLPNKKFCRTNVGNGLKKRPIAIYRDFAIFEESGRKAHTDCLLPDTSFPLQGHISSG
CKKTNTLISSSKPIARKKLCLRSPLGSLEKFKRQYGKVSSLATEVKESNADVTNGLSPQV
VSESDIPLKDQNCSDNSDICESAAMKYNASSGGCQPLSRILYSEKFPLSEEEGGLEQQMA
HLRESPIPFKELSDFNRRPLDVEKSPESLASKLSKLKGSEKETEAMEVSHFNELPDSNSN
TEDSNLCSGLTLGFCKLLESEHKKTETDTSSRSNSVTQGNSFNKGNETHSDSNTTENSVI
PETLLVLPYSNSEVINKSSDILIGASERQTGSPASPSKTLMSQVEDSPAKQNEIGFQSSG
SKARACSGKEESTTSSLDWQQHFDVALGRMVYINKMTGLSTFIAPAQDIQTPCTKDLTTV
PVDVVLGNGSQYRCHPFRSDLVLPFLPRVQERTVARQSDRDTVEDAVGSESLKSLLSEWD
NPVFTRYPEVAVDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMST
KTEENGKAGSQWLMIQVLGLLPALWETQMEFLDLGFSLVQPWPLWPFGGNLLVLVDQHAA
HERIRLEQLLTESYEKQQPQGSGRKKLLSSTIIPPLEITVTEEQRRLLRCYHKRLEDLGL
EFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEEFLREQVELLQTTGSIQG
TLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIEALSCCQLPFQCAHGRPSMLPLADMD
HLEQEKQKKPNLAKLRKMAQAWRLFGKAEGCNPRQNLQQSVTPCEPP
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgtggactttagaaaggagcaatgaaaattatgaaattatgaatgtttctttg
gatgttaaatctgttgcaccaagcgtgagttttgtgatctgcctagaaatcagaggccag
aggaggaaaccagtgcctggcattcccaccagctgtctgcctgccatgatcaagtgcttg
tcggttgaagtgcaagccaaattgcgttctggtttggccataagctccttaggccaatgt
gttgaagaacttgtcctcaacagcatcgatgccgaagcaacatgtgtggcggtcagggtg
aacatggaaacctaccaagttcaagtgatagacaatggatttggaatggggagtgttgat
gtagacaaggtggggaatcgttatttcaccagtaaatgcacctcggtacaggacctggag
aacccaaggttttatggtttccgaggggaggccttggcaagtatagctgacatggccagt
accatggaaatttcatctaagaaaaacagaacaatgaaaacgtttgtgaaactgtttcag
aatggaaaagctctgaaagcttatgaagctgatttgactagaccaagtgctgggacaaca
gtaacagtctataacttattctaccagttgcctgtaaggaggaaatgtatggatcctaga
ctggagtttgagaaagttaggcaaaggatagaagctctctcactcatgcacccttccatt
tctttctctttaagaaatgatgtttctggttccatggttcttcagctccctaaaaccaaa
gacatgtgttcccgattttgtcaaatttatggattgaggaagtcccagaagttaagagaa
atacattttaaatataaggagtttgagcttaatggctatatcagctctgaagcacactac
aataagaatatgcagtttttgtttgtgaacaaaagattagttttaaggacaaagttgcat
aaactcattgactttttattaaggaaagaaagtattatatgtaagccaaaaagtggttct
gccagtagacaaatgaattcaagtcctcggcatcgatcaaccccggagctctatgggata
tacgtgatgaatgtgcagtgcccgttctgtgagtatgatgtgtgcatggagccagcaaaa
acactgattgagtttcagaactgggatactcccttggtttgcattcaggaaggagtgaaa
ctgtttttaaagcaagaaaaattatttgtggaattatcaggtgaagatattaaggaattt
aatgaagataatgattttaatttatttggtactactcttcagaagcacgtaacctctgat
gagaagtgtggccagggcagtttccaggaagcatgcaataatattttggattcctatgaa
atgtttaacttacaatcaaaagctgtgaaaagaaaagttactatagaaaacataaacaca
gagaattctaagggttcagaagctatcagaaaaaagacacatgattcatttttgtccact
catgaatcagatggcccattgcgtaataaaatggcagagtcatctttactcaatgataac
tcttgcccagattcaaggatgttagaacaagagacagttgaagcatcagacacaagagaa
aacatagaacataaaacttgccttgaacctaactctttagaagatccacatagagccact
tcagaagagttttcaaatgcttttcaaacatatcatttagagaagaatgaggaagatcta
gaagtacagaaagagagtatgactgtcaatggcgtggctgccaacattctgaaaaataat
accatgcagaatcaactagagagactgggagatgctactgcaatgggatgccagcctctg
tcttttgagacaacattattgaacgtacatagtgctcagggagagaaagagaaaagaaaa
gcagagcctggggattgtggaggaagaagcaactttagttatggacaagttaaattatgt
tccactggctttatcactcatgtggtacaaagtgaggtgactcagcccactggagcagaa
cctacctttaaaaattacgttcgacctggtcctgcaagtgcccaagagatgtttggaagt
ggaacacgtcattcagttgagactccagatgtcagagatttaaccagcattttaagtaaa
gaacctgctcaactgcccaacaaaaaattttgcagaacaaatgtaggtaatgggctcaag
aaaagacccatagcaatttacagagattttgccatttttgaggaaagtggtcgaaaagca
cacacagactgtttattacctgatacatctttccctttgcaaggacatatttcaagtggt
tgtaagaaaacaaatacattgattagttcatccaaacccatagcccgtaagaagctatgc
ttgcgttcaccgctggggtctttagagaagtttaagaggcagtatgggaaggttagttct
ctggctacagaagtgaaggaaagtaatgctgacgtcactaacggtctcagtcctcaagtt
gtgtctgaatctgacattccactgaaagatcagaattgctcagacaactctgatatttgt
gaaagtgcggccatgaagtataatgcgtccagcggtggttgtcagccgctgagtcgcatc
ctgtactcagagaagtttccgttgtctgaggaagaaggtggtttggaacaacagatggct
catttgagagaaagtcctatacctttcaaggagttgtcggactttaacagaaggcctttg
gatgttgagaagtcgcctgaatcactagcctctaaattatccaaactgaagggttctgaa
aaagagacagaagcaatggaagtgagtcattttaatgaacttccagattcaaattccaat
acagaagacagtaatttgtgcagtggcctaaccctaggtttttgtaagttacttgaaagt
gagcataaaaaaacagagactgacaccagctcaagatcaaattctgttacacagggtaat
tccttcaataaaggtaacgaaacacattctgacagcaatacgacagagaattctgtgata
ccggaaactcttttggttttaccttacagtaattctgaagttatcaataaaagttcagac
attcttatcggagcttcagaacgacagacaggaagtcccgcctctcccagtaaaacgtta
atgagtcaggtagaagattccccagccaaacaaaatgaaattggttttcagagtagcgga
tctaaagcaagggcttgttctggaaaagaagagtcaaccacatcctccttggattggcag
cagcactttgatgtcgccctgggaaggatggtttacatcaacaaaatgacagggctcagc
acgttcattgctcctgctcaggacattcagaccccttgtacgaaggacctgacaaccgtg
cctgtggatgtcgtgcttgggaatgggtctcagtacagatgtcatccttttagaagtgac
cttgttcttcctttccttccaagagttcaggagaggactgtggcgagacagagtgacaga
gatactgtggaggatgctgttggcagtgaatccctgaagtctttgctctcagaatgggac
aacccagtatttacccgctacccagaggttgctgttgatgtaagcagtggccaggctgag
agcttagcggttaaaattcacaacattttgtatccgtatcgtttcaccaaagaaatgatt
cattcaatgcaggttctccagcaagtggataacaagtttattgcctgtttaatgagcact
aaaactgaagagaatggcaaagcaggaagccagtggttgatgatccaagtgcttgggctc
ctgccagccttgtgggagacccagatggaattcctggatcttggcttcagtctggtccag
ccctggccgttgtggccatttggtggaaacctgctcgtcctggtggaccagcacgccgcg
cacgagcgcatccgtctggagcagcttcttactgaatcgtatgagaagcaacaaccacaa
gggtctggtcggaaaaaattgctgtcttccaccataattcctccactggagataacggtg
acggaggagcaaaggagactcctacggtgttaccacaagaggctggaagatctgggcctt
gaatttatatttccagacactagcgattctctgatcctggtgggaaaagtaccactgtgc
tttgtggaaagagaagccaatgaacttcgcagaggaagatctactgtgaccaagagtatc
gtggaggaattccttcgagaacaagtagagctgctccagaccactggaagcatccagggg
acgctgccgctgacggtacagaaggtgctggcctcccaggcctgccatggggccattaag
tttaatgatggactgagcctagaggagagtcgtcgcctgattgaagccttgtcctgctgc
cagctgccattccagtgtgctcatgggagaccttctatgctgccattagccgacatggac
cacttggagcaagaaaagcagaagaaacccaatcttgctaaacttcgcaaaatggcccag
gcatggcgtctctttgggaaagcagaaggttgcaatccaaggcagaatctgcagcagtcg
gtaactccttgtgagccaccctga
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integrated database retrieval system
