KEGG   Oryctolagus cuniculus (rabbit): 100339175
Entry
100339175         CDS       T03373                                 
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
  KO
K17963  peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100339175
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Coactivators
    100339175
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 100339175
NCBI-ProteinID: XP_008268619
Ensembl: ENSOCUG00000000510
UniProt: G1SDG5
LinkDB
Position
18:47058098..47072772
AA seq 1646 aa
MAARRGRRDGVAPPPTGGPGPDPGGGVRSSGWGSRSQAPYGTVGAMSGGEQVLVHEEGDD
SGFVNLSRLGPSLRDKDLEMEELMLQDETLLGTMQSYMDASLISLIEDFGSLGESRLSLD
DQNEVSLLTALTEILDNADSENLSPFDSIPDSELLVSPREGSSLHKLLTLSRTPPERDLI
TPVDSLGSGTGSSRMNGVEMSLADPSWDFSPPSFLETSSPKLPSWRPPRSRPRWGQSPPP
QQRSDGEEEEEAASFGGQMLAGELSNSVSSVPDFPMHLACPEEEDKVMEMAGPVAGDESI
SSLSELVRAMHPYCLPNLTHLASLEDELQEQPGDLTLPEGCVVLEIVGQAATAGDDLEIP
VVVRQIPPGPQPVLLDDSLEASPALQLLMPTLESEAEAAVPKAALCPEKDGLSLDSEKMG
SACLLEPSKAMEPKGLQNPPANTVLGSQRARKVRRKKSKEQPAACAESYARRLRSSCRGQ
STTATERTSQAGNLQKQPQEELQREGGPPQGRGKPRAWARAWAAALEKPSPGNSERSAGQ
GSPAKEGPLDLYPKLVDTVQGSPVPAHLSLPDSAEAGPPEGDPVFVDSHPPDPVLIGPVV
SDSAAVDPARVVPTSDDIPLVDVVAADPVPVVSPTPVDSVPSDLAPVDPVLVKSRPTDPR
RAAAAAAAAAAAAAQGSLVPHLLESESSDCTKAIIPEAREVVGALKVESGTSTTTQEARP
RPLSLSEYRRRRQQRQAETEERSPQPPAGKWPSLPETPTGLADIPCLIVPPAPAKKTTLQ
RSSEAPPEACFVPVGPSPASVSPEPPVSKPVASTPTEQVLSREMSLPARPPPSVQSVSPV
GPMAPPMPTGLPFPPGGLGMPPMLPPPASGHGVPSLPPPPLQPPSLPVSVGPVPPDPYPH
YAPVPPWPCYPPVSPSGYPCLPPPPAVPLVSGTPGTYAVPPTCNVPWVPPPAPVSPYSST
CTYGPMGWGPGPQHPPFWSTVPPPPLPPASVGRAVPPSKIEPSGIPAGPPDNVLSTPMAP
ALTVEPAGHGAPQIEHTKVEVKPVPASPHSKPKGSSSVQSPRGKAPPCPSAEGVAVAPGS
EKSETQESKPKEKSPSPATRALPTPRQSTVPKLPAVHPARLRKLSFLPAPRTQGPEDVVQ
AFISEIGIEASDLSSLLEQFEKSEAKKECPPPAPADTLAVGNSGSVDTPQEKRPLDRLQA
PELANVAGLTPPATPPHQLWKPLAAVSLLAKARSPKSTAQEGTLKPEGVTEAKHPAAACL
QEGVHGPNPVHVGSGDHDYCVRSRTPPKKMPALVIPEVGSRWNVKRHQDITIKPVLSLVP
AAPMPPRTAASQEPLDHRTSNEQADPSAPCLAPSALLSPEASPCRNDANTRTPPEPSTKQ
RSVRCYRKACRSASPPSRGWQGRRGRSSRSVSSGSNRTSEASSSSSSSSSSSSRSRSRSL
SPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRY
GSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTIHFRV
QGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLDSNREDFD
PAPVKSKFDSLDFDTLLKQAQKNLRR
NT seq 4941 nt   +upstreamnt  +downstreamnt
atggcggcgcgccggggacgcagagacggagtcgcgccgcccccgactgggggccctggc
ccggaccccggcggtggagtccgcagtagcggttggggcagtcggagccaagcgccgtac
gggaccgtgggcgctatgagcggcggggagcaggtgctggtgcatgaggagggggacgac
tctggctttgtcaatctgtctcggctgggcccctctctgagggacaaggacctggagatg
gaggagctgatgctgcaggatgagacattgctggggaccatgcagagctacatggatgcc
tctctcatctcccttattgaggattttgggagccttggagagagcagattatctctggac
gaccagaatgaagtatcgctgctgacagcgctgacggagatcttggacaacgcggattct
gagaacctgtctccgtttgacagcattcctgactcggagttgcttgtgtcacctcgggag
ggctcctctctgcacaagctgctgactctctctcggacgcctccagaacgtgacctcatc
accccagtagactcactggggtctggcacaggcagcagtagaatgaatggggttgagatg
tctcttgcagatccttcttgggacttctccccaccttccttcttagagacctcttccccc
aagcttcctagctggagacccccaagatcaagaccacgctggggccagtctcctccccca
cagcagcgcagtgatggagaagaggaggaggaggcggccagctttggtggccagatgctt
gctggggagctcagcaactcagtgagcagcgttccagacttccccatgcacttggcctgc
cctgaggaggaagacaaggtcatggagatggcagggccagtggctggtgatgagagcatc
tcctccctgagtgagttggtgcgtgccatgcacccctactgcctgcccaacctcacccac
ttggcgtcactggaagatgagcttcaggagcagccaggcgatttgacgctgcctgagggt
tgtgtggtgctggagattgtgggccaggcagccacagctggtgatgacttggagattccg
gttgtggtgcggcagatacctcctggacctcagcctgtgctattggatgactcgctagag
gcaagtcctgccttgcagctgctcatgcccacattggagtcggaggcagaggctgctgtg
cctaaggcagccctctgtcctgagaaagatggcttgtcactggattcagagaagatgggc
tcggcctgcttgttggagcccagcaaggccatggaacccaaggggctgcagaacccacct
gccaatacagtgctgggttcccagagagcccgaaaggtcaggaggaagaagagtaaggag
cagccagcagcctgtgcagaaagctatgctaggaggctgaggtcatcctgtcgtggccag
tctaccacggctacagaaaggacctctcaggcaggcaacttgcagaaacagcctcaggag
gaacttcaaagagagggtgggccaccccagggtagggggaagcctcgggcttgggctagg
gcctgggcagctgccttggaaaagcctagccctggaaactcagagagaagtgcaggacaa
ggtagtcctgctaaagaaggtcctctagatctttacccgaagctggttgacactgtccaa
ggcagccctgtcccagcccatctctcgctgcctgactctgctgaagctggtccccctgaa
ggcgaccctgtgttcgttgactctcacccacctgacccagtgctaattggccctgttgtg
tctgactcagcagcagttgaccctgcaagggttgttcccacctcagatgatataccattg
gtcgatgttgttgcagctgatccagtgccagttgtcagcccaacaccagttgactctgtt
cccagtgacctggctccagttgaccctgtgctagttaagtccagaccaactgatcccaga
cgtgcagcagcggcggcagcagcagcagccgccgccgcagcccaggggagtctagttcct
catctcctggagtcagagtcctcagactgcacaaaggccatcatccctgaagccagggag
gttgtgggtgctctcaaggtggaaagtggtaccagtaccacaacccaggaagccagacct
cggcctctcagcctttctgagtaccggcggcgacggcagcagcgtcaagcagagacagaa
gagaggagtccccagcctccagctgggaagtggcccagcctcccagagactcctacgggg
ctggcagacatcccttgtcttattgtgccaccagctccagccaagaagacaactctgcag
agaagctctgaagctccccctgaggcttgctttgtgcctgtgggccctagtcctgcttct
gttagtcctgagccacctgtaagcaaacctgtggcctcaactcctactgagcaggtgcta
tcccgggagatgtcattgccggcaagacctcccccttctgtgcagtctgtgtcccctgtt
gggcccatggctccccccatgccaactggtctgccttttcccccaggtgggctggggatg
ccccctatgctgcccccacctgcaagtgggcatggggttcccagtttgccccctcctcca
ttgcagcctcctagtcttccagtatctgtagggccagtgccacctgatccctatcctcac
tatgctcctgtgccaccctggccttgttatccccctgtgtccccttctggctatccttgc
ctgcctcccccaccagctgtgcccctggtgtctggtactcctggcacctacgctgtgccc
cccacttgtaatgtgccttgggtaccccctcctgccccagtgtcaccttacagttccacc
tgtacctatgggcccatgggatggggcccagggccacaacaccctccattctggtctact
gttcccccacctcctttacctccagcctctgttgggagagctgtgcccccatccaagata
gagcccagtggcattccagctggccctcctgataatgtactttccacgcccatggctcct
gccctcactgttgagccagctggccatggagctccacagatagagcacaccaaggtagag
gtcaagcctgtgcctgcatctcctcattcgaaacctaaggggtcctcctcggtgcaaagt
ccccgtggcaaggctccaccatgtccatctgccgagggtgtggctgttgcacctgggtca
gagaagtctgagactcaggagagcaagcccaaggagaagtccccttctcctgctaccagg
gctcttcccacaccacggcagagcactgtgcccaagctgcctgctgtccacccagcccgt
ctaaggaagctgtccttcctgcctgccccgcggacccagggtcctgaagatgtggtgcag
gctttcatcagtgagattggaattgaggcgtcggatctgtccagtctgctggagcagttt
gagaaatcggaagccaaaaaggagtgtcctcccccggctcctgctgacaccttggctgta
ggaaactcaggcagcgttgacactccccaggagaagaggcccctagaccggttacaagcc
ccagaactggccaacgtggcagggctcacccctccagctacccctccccaccagttatgg
aagcccctggctgctgtctcactgctggccaaagccagatctcctaagtccaccgcccag
gagggaaccctgaagcctgaaggagttacagaggccaaacatccagctgcagcctgcctg
caagaaggggtccatggccctaatccagtccatgtgggctctggggaccatgactattgt
gtccggagcaggacccccccaaaaaagatgcctgccttagtcattccagaggtgggctct
cggtggaatgtcaaacgccatcaggatatcaccatcaaacctgtcttgtccctggttcca
gctgctcctatgcccccacgcacagctgcctcccaggagccacttgatcacaggactagc
aatgagcaggcagatccctcagcaccttgccttgccccatctgccttgctgtcccctgag
gcctcaccctgccgaaatgacgcgaacactaggactcccccagagccttcaaccaagcag
cggtcagtgcgctgttaccgaaaagcctgcaggtcagccagtcccccaagccggggctgg
cagggccgccgcggccgcagcagccgttctgtcagctctgggtccaaccggaccagcgaa
gcatcttcctcttcatcctcatcgtcgtcttcctcatcccggtcccggtcccggtccctc
tcccccccacacaagaggtggcgaaggtctagctgcagttcctctggacgatcccgaaga
tgctcttcctcttcctcctcatcatcttcctcctcctcctcctcttcctcatcatccagt
tcccgaagccgttcccgctccccatccccacgccggagaagtgaccggaggcggcggtac
ggctcttaccgttcacatgaccattaccaaaggcagagagtgttgcagaaggagcgtgca
atagaagagagaagggtggtcttcattgggaagatacctggccgcatgactcggtcagaa
ctgaaacagaggttctctgtctttggagagattgaggagtgcaccatccacttccgtgtt
caaggtgacaactatggcttcgtcacttaccgctatgctgaggaggcatttgcagccatt
gagagtggccacaagctgcgccaggcagatgagcagccctttgacctatgctttgggggc
cgcaggcagttctgcaagaggagctattctgatcttgactccaaccgggaagactttgat
cctgctcctgtaaagagcaaatttgattctcttgattttgacacattgttgaaacaggcc
cagaagaacctcaggaggtaa

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