Oryctolagus cuniculus (rabbit): 100339243
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Entry
100339243 CDS
T03373
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100339243
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Other domain-containing proteins
Tubby family proteins
100339243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
SOCS_box
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_EML
Beta-prop_LRRK2
DUF3527
Motif
Other DBs
NCBI-GeneID:
100339243
NCBI-ProteinID:
XP_051711147
Ensembl:
ENSOCUG00000001444
UniProt:
G1SFG1
LinkDB
All DBs
Position
12:complement(7359729..7603381)
Genome browser
AA seq
1561 aa
AA seq
DB search
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPIFLVEDSSESDTDSDDYSPP
QDGPAAHPIPVQNMKPLLTVSFSSGDISLMNSYDDLSPTVIRSGLKEVVAQWCTQGDLLA
VAGMERQTQLGELPNGPLLKSAMVKFYNVRGEHIFTLDTLVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQAIASALREDKDASKLTLPPRLCSYLSTAFIPTIKPPI
PDPSNMRDFVSYPSAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRVSKL
RPEFVIMDPRTDTKSGKGKHGFREREKERAITDEIYGNSLVSTMIDSCNCSDSSDIELSD
DWAAKKSPKISRASKSPKLPRISIEARKSPKLPRAAQEISRSPRLPMRKPSIGSPSLTRR
EFPFEDITQHNYLAQVTSNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLP
EVRKISMDYINLPVFNPNVFSEDEDDLPVTGASGVPESNPPCTVNIPIAPIHSSAQAMSP
TQSIGLVQSLLANQNVQLDVLTNQTTAMGAAEHAGDSVSQYPVSNRYSNPGQVIFGGVEM
GRILQNPPQLSLPPPPPGAMQLSMVDHGGRDQEHLQKPAKALRPVPPLAAEGDAVVFSAP
QEVQVAKMNPPPPYPGTIPAAPTTAAPPPPLPPPQPPVDMCLKKGDFSLYPTSAHYQTPL
GYERITTFDSSGNVEEVCRPRTRVLCSQNTYTLPGPGSSATLRLTATEKKVPQPCTSATL
NRLTIPRYSIPTGDPPPYPEIASQLAQGRSTAQRLDSSLIHATLRRNNREATLKMAQLAD
SPRAPLQPPPAKPKGGPAGTAAQLPTRPPPGLYTCSQCSGAGPSSQPGAILAHAVSASPL
ASQSSYSLLSPPGSGRDRTDYVNSAFTEDEALPQHCQLEKPLRHPPLPEAAVAVKRPPPY
QWGPVLGEDVWVPQDRTAQAAGPNPLKLPPPMLGQGQHLDVARVPFIAPKSPASPTATFQ
TGYGMGVPYAGSYNSPPLPGVPAPCSPKDALSPAQFAQPESAAVPEPAHPPGLSYCTLPP
TYPGSSTCSGLQLPALALHPWSSYGTCPPMQTPQGALPPKPHLVVEKPLVSPPPTDLQSH
MGTEVMVETADNFQEVLSLTESPVPQRTEKFGKKNRKRLDSRAEEGNVQAITEGKVKKEA
RALSDFNSLISSPRLGREKKKVKSQKDQLKSKKLNKTNEFQDSSESEPELFISGDELMNQ
GQAGKKGWKSKRSLRTASELEEFKCRKASEKEDGRLGSQGFVYVMANKQPLWNEATQVYQ
LDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRL
K
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcggtggagcacgggcctgtgctgtgcagtgactccaacatcctgtgcctg
tcctggaaggggcgtgtccccaagagcgagaaggagaagccggtgtgcaggaggcgctac
tatgaggaaggctggctggccacaggcaacgggcggggcgtggtcggcgtgactttcacc
tccagccactgccgcagggacaggagtacgccacagaggataaacttcaacctgcggggc
cacaatagcgaggttgtgctggtgaggtggaatgagccgtaccagaaactggccacgtgt
gatgcagacggagggatcttcgtgtggattcagtacgaaggcaggtggtccgtggagctg
gtcaacgaccgcggcgctcaggtgagtgacttcacgtggagccacgatgggactcaagca
cttatatcgtatcgcgatgggtttgtcctggtcggttctgtcagtggacaaagacactgg
tcatctgagatcaacttggaaagtcagatcacgtgtggcatttggactcctgatgaccaa
caggtgctgtttggcacggccgacgggcaagtgattgtcatggactgccacggcaggatg
ctggcccacgtcctcctgcacgagtcagatggcatactcagcatgtcctggaactacccc
atcttcctggtggaagacagcagcgagagtgacacggactcagacgactactcgccgccc
caagacggccccgcagcgcaccccatcccagtgcagaacatgaagcctctgctcaccgtc
agcttcagctcgggagacatcagcctgatgaacagctacgacgacttgtctcccactgtc
atccgctcagggctgaaagaggtggtggcccagtggtgcacgcagggagacctgctggca
gttgctgggatggagcggcagacccagctgggtgagctccccaatgggccccttctgaag
agtgccatggtcaagttctacaatgtccgcggggaacacatcttcacactggacacactc
gtgcagcgccccatcatttccatctgctggggccaccgagactcccgactgctgatggct
tcaggcccagccctgtatgtggttcgtgtggagcatcgggtgtccagcctgcagctgctg
tgccagcaggccatcgccagtgccctccgagaggacaaggacgccagcaagctgaccctg
ccccctcgcctctgctcctacctctccactgccttcatccctactatcaagcccccaatt
cctgaccccagcaacatgcgagactttgtcagctacccctcagccggcaacgagcggctg
cactgcaccatgaagcgcacagaggacgacccggaagtgggcggcccctgctacacgctc
tacctggagtacctgggcgggctcgtgcccatcctcaaggggcgccgcgtcagcaagctg
cggccggagttcgttatcatggacccgcggacggacacgaagtcaggaaaaggaaagcat
ggtttcagagagagggagaaggaaagagccatcacagatgaaatctacgggaacagcctg
gtttccaccatgattgacagctgcaactgctcagactccagtgacatcgaactgagtgac
gactgggctgccaagaagtcacccaagatctccagggccagcaagtcgcccaagctcccg
aggatcagcattgaggcccggaagtctcccaagctgccccgggctgctcaggagatctca
cggtctccgcggctgcccatgcgcaagccctccatcggctcacccagcctgacgcggaga
gagtttccttttgaagacatcactcagcacaactaccttgctcaggtcacgtccaatatc
tggggaaccaaatttaagattgtgggcttggctgctttcctgccaaccaacctcggtgca
gtaatctataaaaccagcctgctgcatctccagccacggcagatgacaatttatctccca
gaagttcggaagatttccatggactatattaatttacctgtcttcaacccaaatgttttc
agtgaagatgaagatgatttgccagtgacgggagcttctggtgtccccgagagcaaccca
ccttgtaccgtgaacatccccatagcaccgatccacagctcagctcaagctatgtccccc
acccagagcatagggctggtgcagtccctgctggccaatcagaatgtacagctggatgtc
ctgaccaaccagacaacggctatgggagcagcagagcatgcaggtgacagtgtcagccag
tatccagtctccaaccggtactccaaccctggacaggtgatttttggaggtgtggaaatg
ggccgtatcctgcagaacccccctcagttgtccctgccgccgccaccgccgggggccatg
cagttgtctatggtggaccacggagggcgagaccaggagcacctgcagaagccagccaag
gccctgcggccggtgcctccgctggcagctgagggggatgcagtggtcttcagtgccccc
caggaggtccaggtggcaaagatgaaccctccacccccctacccaggaaccatccccgct
gctccaaccacggcggcacccccgccccctctgccaccaccacagcctccggtggacatg
tgcttgaagaagggcgacttctccctgtaccccacgtccgcacactaccagaccccactg
ggctacgagaggatcaccaccttcgacagcagcggcaacgtggaggaggtgtgtcggcct
cgcacacgggtgctctgctcccagaacacctacaccctccctggcccgggcagctcagcc
accttgaggctcacggccactgagaagaaggtcccccaaccatgcaccagtgccaccctg
aaccgcttgaccatccctcgctactctatccccacgggggacccacctccatatcctgaa
attgccagccagctggcccaggggcggagcactgcccagagactggacagcagcctcatc
catgccaccctgcggaggaacaaccgcgaggccacactcaagatggcccagttggccgac
agccctcgagcccccctgcagccgccaccggccaagcccaagggcggccctgctgggaca
gcagcccagctccccacacggcccccgcctggcctgtacacctgcagccagtgcagtggc
gcggggcccagctctcagccaggcgccatcctggcccatgctgtgagtgcctccccgctg
gcctcccagtcctcctacagtctgctgagcccgcccggcagtggccgcgaccgcacggac
tatgtgaactcggctttcacggaggatgaggccctgccccagcactgtcagctcgagaag
cccttgaggcatcccccgctgcccgaagctgcggtcgccgtgaaacggccgcccccctac
cagtggggccctgtgctgggcgaggacgtgtgggttcctcaggacaggacagcacaggct
gcagggcccaaccccttaaaactgccccctccgatgctaggtcagggccagcacctggac
gtagcccgagtgcccttcatcgcccccaagtctcccgccagccctactgccactttccag
acaggctatgggatgggagtgccgtacgcaggaagctacaacagcccccctctgcccggc
gtgccggctccctgctcccccaaagacgccctgtcgcctgcgcagtttgcacagccggag
tccgctgctgttcccgagcccgcacacccgcccggcctctcctactgcaccttgcccccc
acgtacccaggaagcagcacgtgctccggtttacagctgccagctctcgccttgcacccc
tggagctcctacggcacctgtccccccatgcagaccccccagggtgctcttccccccaag
ccccacctcgtggtggagaagcccctcgtgtccccgccacccaccgacctccagagccac
atgggcaccgaggtgatggtagagactgcagacaacttccaagaagttctctccctgaca
gaaagcccggtcccccagcggacagagaaattcgggaagaagaaccggaagcgcctggac
agccgagcagaggaaggaaacgttcaggccatcacggagggcaaagtgaagaaggaggcg
agggctctgagcgacttcaactctctcatctccagcccccgcctggggagagagaagaag
aaagtcaagagtcagaaggaccagctgaagtccaagaagctgaacaagacgaacgagttc
caggacagctcggagagcgagcccgagctcttcatcagtggggacgagctcatgaaccag
ggccaggccggcaagaagggctggaagagcaagcggagcctgcgcacggccagcgagctg
gaggagttcaagtgccggaaggccagcgagaaggaggacgggcggctgggcagccagggc
tttgtctacgtcatggccaacaagcagcctctgtggaacgaggccacccaggtctaccag
ctggacttcggagggcgggtgacccaggagtcggcaaagaacttccagatcgagttggag
gggcggcaggtgatgcagttcggcaggattgacggcaacgcctacatcctggacttccag
taccccttctcggccgtgcaggccttcgccgtggccctggccaacgtgactcagcggctc
aagtga
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integrated database retrieval system
