Oryctolagus cuniculus (rabbit): 100339666
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Entry
100339666 CDS
T03373
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100339666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100339666
03036 Chromosome and associated proteins [BR:
ocu03036
]
100339666
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100339666
Coactivators
SAGA/TFTC/STAGA complex
100339666
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100339666
STAGA complex
100339666
TFTC complex
100339666
SAGA complex
100339666
SLIK complex
100339666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WD40_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
100339666
NCBI-ProteinID:
XP_002717439
Ensembl:
ENSOCUG00000010697
LinkDB
All DBs
Position
16:complement(47266348..47290807)
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
TPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDIHSNLKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYTSGSSSRSESNGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMTIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR
NTYCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgaacagattcagatggcagtgtcctgctacctcaaacgccgg
caatacgtggactcagacggtcccctgaagcaaggactgcggctgtcccagactgccgag
gagatggcggccaatctcacagttcaatccgaatctggttgtgccaatatagtgtctgca
accccttgccaggcagaaccccagcaatatgaagtacagtttgggcgactgaggaatttt
ctcactgattctgattcccagcatagccatgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatccattctaacttaaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaggaagacagctacaactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctcaccttacatattcatcttgatgtgcag
cctgccaagagaacagactaccagctctacaccagtggtagctcttcccgcagcgagagc
aacggcttagagccccctgacatgcccagtcctattctgcaaaacgaggccgccctggag
gtcttgcaggagagcattaagcgtgtcaaggatgggcctccctccctcactaccatctgc
ttctatgccttctacaacacagagcaactgttgaacactgcagaaatctcccctgatagc
aaactgcttgctgctgggtttgacaactcctgtataaaactttggagtttacgatccaag
aagttaaaatcagagcctcatcaagtagacgtgtcccgcatccacttggcttgtgatatc
ctggaggaagaggatgatgaagatgataatgcaggcacagagatgaagatactgcgggga
cactgtggaccagtgtacagcacaaggttcctcgcagacagctcagggttgctctcttgt
tctgaagacatgaccatcagatactgggacctggggagtttcactaacactgtgctgtat
caaggacatgcctatcctgtgtgggacctggacatcagcccctatagcctgtacttcgcc
agcgggtcccacgaccgcaccgccaggctatggtcatttgatcggacgtacccgctgagg
atatatgcaggacacctggcagatgtggactgtgtcaaattccaccccaattcaaactac
ttagctacaggctctaccgataagactgtccgactgtggagcgcccagcaggggaactcg
gtgaggctcttcacgggccaccgcggccccgtgctttctcttgccttttctcccaacggt
aagtacttggcatctgctggcgaggaccagcggttgaagctgtgggacttggcctctggg
accctttttaaggaactgagaggccacacagacaatatcaccagcctcaccttcagtccg
gacagcggcttgatcgcctctgcctccatggacaactctgtgcgcgtctgggacatcagg
aacacttattgcagcacgcctgccgacggctcctccagcgagctcgtgggcgtgtacact
gggcagatgagcaacgtcctgagcgtgcagttcatggcctgtaacctccttctggtgact
ggaatcacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system