Oryctolagus cuniculus (rabbit): 100339773
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Entry
100339773 CDS
T03373
Name
(RefSeq) nuclear RNA export factor 2 isoform X1
KO
K14284
nuclear RNA export factor
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
ocu05014
Amyotrophic lateral sclerosis
ocu05164
Influenza A
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100339773
03015 mRNA surveillance pathway
100339773
03008 Ribosome biogenesis in eukaryotes
100339773
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100339773
05168 Herpes simplex virus 1 infection
100339773
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100339773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100339773
03009 Ribosome biogenesis [BR:
ocu03009
]
100339773
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100339773
mRNA cycle factors
Stress granule specific factors
100339773
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100339773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Nop5_N
Motif
Other DBs
NCBI-GeneID:
100339773
NCBI-ProteinID:
XP_008271331
Ensembl:
ENSOCUG00000005789
UniProt:
G1SPN8
LinkDB
All DBs
Position
X:complement(87113245..87129775)
Genome browser
AA seq
592 aa
AA seq
DB search
MESNNGGGCPQGKKKDDEDSLQGKFDHGNFHYEHAVGELLSSNLQEDRNRMMRDVHENPQ
LRRSMECHYEHQDRILPEGAVTANTDNEALRKLFKITIPYGIKYEKTWLINSIQSYCSVP
FTPINLRYVRNQVEFFVQDASTASTLEDINYKIYDEENQKISILVEPSTETHSVQTNLKP
EQMEVLMLTMNKRYDVSQKALDLQSLSFDRDLVGHETDMILDERKCMTAALQIIEKNFSE
LLSLNLCNNKLYQLDGLSDIIGKVPKVKILNLSANKLRTAWELEKVKELDLEELWLEGNP
LCRTFPSHAAYVRAIRNCFPKLLRLDGKELPPIAIDMEVPEIIKPCKESYKGSETLKSLI
LQFLLRYYVIYDSGDRRGLFGAYHEKACFSLTIPFNCGDPFSLWEYFKYSRNMKKLKDPY
LRRQLLKHTKHDIVNSLSVLPRTQHDFSSCVVDLCFQTEMMLCFSVSGVFKELEGKSPGI
VRAFTRIFILASVSSSSICIVNDKLIVRNASPKETQSAFSTPLPSCFSSSVPTLSQEKME
MVKAFSTQSGMNLEWSQKCLEDNEWNYATAAQIFTMLQRQGRIPEEAFKQIP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaataatggtggtggctgtcctcaaggaaaaaagaaagatgatgaagattct
ttgcaagggaaatttgaccatgggaactttcattatgaacatgctgtgggtgagcttctg
tcttcaaacctccaggaggatcgaaacaggatgatgagggatgtccatgagaacccccag
ctaagacggagcatggaatgccattatgaacatcaagatagaattcttccagagggagct
gtgacagcaaatacagataatgaagccctgaggaaattgttcaagataacaattccctac
gggataaagtatgagaagacatggctaattaattcaatccagagctattgcagtgtccct
ttcaccccaatcaacctcaggtatgtcagaaatcaagtggagttctttgttcaggatgct
agcactgcctcgacattggaggatatcaactacaagatttatgatgaggaaaatcaaaag
atatctatccttgttgaaccttccactgaaactcattctgtgcagactaacttaaagcca
gagcaaatggaggtgctaatgttgaccatgaacaaacgatatgatgtttcccagaaagct
cttgacctccagagcctcagctttgaccgagacttggtaggccatgaaactgacatgatc
ttggatgaaagaaaatgtatgactgctgccctgcagatcattgaaaagaatttctctgag
ctgttgtccttgaatttgtgtaacaacaagctgtaccagctggatggcttgtctgacatt
atagggaaggtgcccaaagtcaagatcctgaacctctctgcaaacaagctgaggacagca
tgggaattggagaaggtgaaagagctggatctggaagagctgtggctggaagggaacccc
ttgtgcagaaccttccctagccatgctgcctacgtaagggccatccggaattgtttcccc
aagttattacgcctggatggaaaggagttaccaccaattgcaattgatatggaagtcccc
gagataataaaaccttgtaaggaaagctataaaggatctgagaccctgaagagtctcatc
ctgcaatttctgcttcggtattatgtgatttatgactctggagatcgacggggtctcttt
ggtgcttaccatgaaaaggcctgcttctccctgaccatccccttcaactgtggtgatcca
ttcagcttatgggagtactttaagtatagcaggaatatgaagaagctcaaggacccatac
ttgcggaggcagctgctgaagcacacaaagcatgacattgtgaattctctcagtgtcttg
cccagaactcagcatgacttcagctcctgtgtggtggacctgtgttttcagacagaaatg
atgctctgcttttctgtcagcggtgtgttcaaggaattggaaggaaagtccccgggtatt
gttcgtgccttcaccaggatcttcatcttggcttctgtcagcagttccagcatatgcatt
gtgaatgacaagctgattgtgaggaatgccagccccaaagagacccagagtgccttttcc
actcccttgccctcatgcttctccagctctgtgcccaccctctctcaagagaagatggaa
atggtgaaggctttctccacccagtctgggatgaatttggagtggtctcagaagtgcctt
gaagacaacgagtggaactatgccacagctgcgcagatctttactatgctccagaggcag
ggcaggatcccggaggaggccttcaagcaaattccctaa
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