Oryctolagus cuniculus (rabbit): 100339839
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Entry
100339839 CDS
T03373
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04810
Regulation of actin cytoskeleton
ocu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100339839
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100339839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100339839
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100339839
Factors involved in mRNA localization
Other mRNA localization factors
100339839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
100339839
NCBI-ProteinID:
XP_051678173
Ensembl:
ENSOCUG00000010732
LinkDB
All DBs
Position
17:78386196..78485471
Genome browser
AA seq
1253 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaggtgacgctggaggatgcgctgtccaatgtggacctcctggaggagctg
cctctgcccgaccagcagccctgcatcgagcccccgccatcctcactgctctaccagccg
aatttcaacactaactttgaagacaggaatgcctttgtcaccggcatcgcaagatacatt
gaacaagccactgtccactctagcatgaatgagatgctggaggaaggccaagagtacgcc
gtcatgctgtacacctggagaagctgctcccgggccatcccccaggtgaaatgtaatgag
cagcctaacagagtggaaatctatgagaaaaccgtggaggtcctggagcctgaggtcacg
aaactgatgaatttcatgtacttccagagaaacgccatcgagcgtttctgcggggaggtg
cggcgcctgtgccacgccgagaggaggaaggacttcgtgtccgaagcctacctgatcacg
ctgggcaagttcatcaacatgttcgccgtgctggacgagctgaagaacatgaagtgcagc
gtgaagaacgaccactcggcctacaagagggctgctcagtttttacgtaaaatggcagat
ccacagtccatccaggagtctcagaatctgtccatgttcctggcaaaccacaacaagatc
acgcaatctctgcagcagcagctcgaagtcatttctggctacgaagagctcttggcagac
atcgtgaatctgtgcgtggattactacgagaacaggatgtacttgacgcccagcgagaaa
cacatgcttctcaaagtcatgggatttggtctgtacttgatggatggaagtgtcagtaac
atctataaactagatgccaagaaaagaattaacttgtccaaaattgacaagtacttcaag
cagctccaggtggttccgctgttcggggatatgcagatagaactggcaagatacatcaag
accagcgcccactatgaggagaacaaatcccggtggacctgcacgtcttccagcagcagc
ccgcagtacaacatctgcgagcagatgatccagatccgcgaggaccacatgcgcttcatc
tcggagctggcgcgctacagcaacagcgaggtagtcacagggtcaggccgtcaggaggcc
cagaagacagacgccgagtaccggaagctcttcgacctggctctgcaaggcctgcagctg
ctgtcgcagtggagtgcacacgtgatggaagtgtactcgtggaaacttgtgcacccaacc
gacaagtactccaacaaggactgtccagacaacgctgaggagtatgagcgtgccacgcgc
tacaactacaccagcgaggaaaagtttgccctggtggaggtgatcgccatgatcaagggc
ctgcaggtgctgatgggcaggatggagagcgtgttcaaccatgccatccggcacacagtc
tacgcagcgctgcaggacttctcccaggtgacactgcgggagccgctgcggcaggccatc
aagaagaagaagaatgtcatccagagtgtcctgcaggccatcaggaagacggtgtgtgac
tgggagacagggcatgagcccttcaacgacccggctctgcggggcgagaaggaccccaag
agtggctttgacatcaaagtgccacggcgcgccgtgggaccctccagcacgcagctttac
atggtgagaaccatgctagagtccctcattgcagacaaaagtggttccaagaaaaccctg
agaagtagccttgaggggcccaccatattggacatagaaaaatttcatcgcgagtccttc
ttctacactcacttgataaatttcagtgaaacactgcagcagtgctgtgacctctcacag
ctgtggttccgagagttcttcctggagctgaccatgggcaggaggatccagttccccatt
gagatgtccatgccttggatcctcaccgaccacatcctggagaccaaggaggcgtccatg
atggagtacgtcctctactccctggacctgtacaacgacagtgcccactacgcgctcacc
aggttcaacaagcagtttctctacgacgaaatcgaggcagaggtgaatctatgttttgac
caatttgtttacaagctggctgaccagatatttgcatattataaggttatggcaggaagt
ttacttctcgataaacgattacgatcggaatgcaagaaccagggtgccacgatccacctc
ccgccatccaaccgctatgagacactgctgaaacagaggcatgtgcagctcctgggccgg
tccatagacctcaatcgtctgattactcagcgagtctcagcagccatgtataagtctctg
gagctggcaattgggcgatttgaaagtgaagacttaacatcaatagttgagttggatggc
ctcttggaaatcaaccgcatgacccacaagctgctgagcaggtacctgacactggacagt
tttgacgctatgttccgggaggccaaccacaacgtgtctgctccctatgggagaatcacc
ctccacgtcttctgggaactcaactacgacttcctgcccaactactgctacaacggctcc
accaaccggtttgttcggacagtattaccattttctcaggagtttcaaagagacaaacag
ccaaatgcacaaccccagtatttgcatgggtccaaggctttgaacctggcctactccagc
atttatggcagctacaggaacttcgtggggcctccacactttcaggtcatctgccggctg
ctcggctaccaaggcatcgctgtggtcatggaggagctgctgaaggttgtcaagagcctg
cttcaaggcacgatcctgcagtacgtgaagacactgatggaggtgatgcccaagatctgc
cgcctgccccggcatgaatacggctctcctggcatcctggagtttttccaccaccagctg
aaggacattgtggagtacgcagaactgaagactgtgtgcttccagaatctgcgggaggtg
ggcaatgctgtcctcttctgcctgctcattgaacagagcctgtctttagaagaagtatgt
gacctgttacatgcagcccctttccagaacatcttaccacgtgtccatgtgaaagagggg
gagagacttgatgccaagatgaaaagactggaatccaagtatgccccactgcatcttgtc
ccactgattgaaaggctagggactcctcagcaaattgcaatcgcaagagagggtgacctg
ctgaccaaggaacggctctgctgcggcctgtctatgtttgaggtcatcctgacacggatt
cgaacctttctagatgaccctatctggcgtgggcctttgcctagcaatggagtcatgcac
gtggatgagtgtgtggagtttcacaggctgtggagtgccatgcagtttgtctactgcatt
ccagtggggacgcatgagtttactgttgagcagtgttttggtgatggactccactgggct
ggttgtatgatcattgtacttctcgggcaacagcggcgctttgctgtgctggatttttgc
tatcatctacttaaagtccagaaacatgatggcaaagatgagatcatcaaaaacgtgcct
ttgaagaagatggtggaaagaattcgcaagttccagattcttaatgatgagatcatcact
atcctggacaagtacttgaagtctggtgatggagagagcacgcccgtggagcatgtgcgc
tgcttccagccgcccatccaccagtctctagccagcagctga
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