Oryctolagus cuniculus (rabbit): 100340048
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Entry
100340048 CDS
T03373
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100340048
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100340048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
100340048
NCBI-ProteinID:
XP_051681861
Ensembl:
ENSOCUG00000024887
LinkDB
All DBs
Position
1:187187211..187231797
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AA seq
709 aa
AA seq
DB search
MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV
IDKKLRNLEKKKGKLDDYQERMIKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS
QDIQKTIKKTARREQLMREEAEQKRLKTILELQYVLDKLGDDEVRTDLKQGFNGVPILSE
EELSLLDDFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKSVCGTTYKALKEIVERV
FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVAETEPEPAEEYTEQSEVESTEYVNRQFM
AETQFSSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ
DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP
NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRTQKEPIDQIQATISLNTDQTTT
SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ
YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSQDQPHQVTGNHQQPPQQNSGFPRS
NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR
DYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacagcggaagcggcagcaagtcgtccggaccgccaccgccg
tcgggttcctcagggagtgaggcggcggcgggggccggggccgctgcgccggcctctcag
caccccgcaaccggcaccggcgccgtccagaccgaggccatgaagcagattctcggggtg
atcgacaagaaacttcggaacctggagaagaaaaagggtaagcttgatgattaccaagaa
cgaatgatcaaaggggaaagacttaatcaagatcagctggatgccgtgtccaagtaccag
gaagtcacaaataacttggagtttgcaaaagaattacaaaggagtttcatggcattaagt
caagatattcagaaaacaataaagaagacagctcgtcgggaacaacttatgagagaagaa
gctgaacagaagcgtttaaaaactatacttgaattgcaatatgttttggacaaattggga
gatgatgaagtgcgaactgacttgaaacaaggttttaatggagtgccaatattgtctgag
gaggaattgtctctattggatgacttctacaagttggtagaccctgaacgggacatgagc
ttgaggttgaacgagcagtatgaacatgcctccattcatctgtgggacttgctggagggg
aaggaaaaatctgtatgtggaacaacttataaagctttaaaggaaattgttgagcgtgtt
tttcagtcaaactattttgacagcacccacaaccaccagaatgggctgtgtgaggaagaa
gaggcagcctcagcacccgcagttgaagaccaggtagctgaaactgaacctgagccagca
gaagaatacactgaacaaagtgaagttgaatcaacagagtatgtaaatagacaatttatg
gcagaaacacagttcagcagtggtgaaaaggagcaggtagatgagtggacagttgaaacg
gtcgaggtggtaaattcactccagcagcagccccaggctgcatctccttcagtaccagag
ccgcactctttgactcctgtggctcaggcagatccccttgtgagaagacagcgagtacaa
gatcttatggcacaaatgcaggggccctataatttcatacaggattcaatgctggatttt
gagaaccagacccttgatcctgccatcgtatctgcacagcctatgaatccaacccaaaac
atggacatgccccagctggtttgccctccagttcattctgaatctagacttgctcaacct
aatcaggttcctgtacaaccagaagctacacaggttcctttggtttcatccacaagcgag
gggtacacagcatctcagcccttgtaccagccttctcatgctacagaacaacgaacacaa
aaggaaccaattgatcagattcaggcaacaatttctttaaatacagaccagacgacaaca
tcatcctcccttcctgctgcttctcagcctcaagtgttccaggctgggacaagcaaacct
ttacatagcagtggaatcaatgtaaatgcagctccattccaatccatgcaaacggtgttc
aatatgaatgctcctgttcctcctgttaatgaaccagaaactttaaaacagcaaaatcag
taccaagccagttacaaccagagcttttccagtcagcctcaccaagtggaacaaacagag
cttcagcaagaacagcttcaaacagtggttggcacttaccatggttcccaggaccagcct
catcaggtgactggtaaccaccagcagcctcctcagcagaacagtggatttccacgtagc
aatcagccctactacaacagccgtggtgtgtctcgtggaggctcccgaggtgctagaggc
ttgatgaacggataccggggccctgccaatggattcagaggaggatatgatggttaccgt
ccttcattctctaacactccaaacagtggttatacacagtctcagttcagtgctccccgg
gactactctggctatcagcgggatggatatcagcagaatttcaagcgaggctctgggcag
agtggaccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatg
ccgcaaatgaacactcagcaagtgaattaa
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