Oryctolagus cuniculus (rabbit): 100340080
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Entry
100340080 CDS
T03373
Name
(RefSeq) RNA-binding protein FXR1 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100340080
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100340080
Factors involved in mRNA localization
Other mRNA localization factors
100340080
mRNA cycle factors
Stress granule specific factors
100340080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXR_C1
KH_9
FXMRP1_C_core
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
100340080
NCBI-ProteinID:
XP_002716492
Ensembl:
ENSOCUG00000023518
LinkDB
All DBs
Position
14:77639287..77705410
Genome browser
AA seq
621 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
DWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY
ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLQRTPGE
EKINTLKEENTQEAAVLNGVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgttcatgaagactccctcaccgttgtttttgaaaataattggcaaccagagcgc
caggttccatttaatgaagttagattaccaccaccgcctgatataaaaaaagaaattagc
gaaggagatgaagtagaggtatattctagagcaaacgaccaagaaccatgtggatggtgg
ttggctaaagttcggatgatgaaaggagagttttatgtcattgaatatgctgcttgtgat
gccacttacaatgaaatagtaacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacggtggatgttcctgaggatttgagagaggcg
tgtgctaacgaaaatgcacataaagattttaagaaagcagtaggtgcgtgcagaattttt
taccacccagaaaccacacagctaatgatactgtctgccagtgaagcaactgtgaagaga
gtaaatattttaagtgacatgcatttgcgaagtattcgtacgaagctgatgcttatgtcc
agaaatgaagaagccactaagcatttagaatgcacaaaacaacttgcagcagcttttcat
gaggaatttgttgtgagagaagatttaatgggcctggcaataggaacacatggtagtaac
atacagcaagctaggaaggttcctggagtcaccgctattgaactagatgaagatactgga
acatttagaatctatggagagagtgctgatgctgtaaaaaaggctagaggtttcttggaa
ttcgtggaggactttattcaggttcctaggaatcttgtcggaaaagtaattggaaaaaat
ggcaaagttattcaagaaatagtagacaaatcaggcgtggttcgggtgagaattgaagga
gacaatgaaaacaaactacctagagaagacggaatggttccgtttgtgtttgttggcact
aaagaaagcattggaaatgtgcaggttcttttagagtatcatattgcttatctaaaggaa
gtagaacagttaagaatggaacgcctacagattgatgaacagctacgacagattggttct
aggtcttatagtggaagaggcagaggtcgtcggggccctaattacacctccggttatggt
acaaattctgagctgtctaacccctctgaaactgaatctgaacgtaaagacgagctgagt
gattggtcattggcaggagaagatgatcgagagagccgacatcagcgtgacagcaggaga
cgcccaggaggaagaggcagaagtgtttcagggggtcgaggtcgtggtggaccacgtggt
ggcaaatcctccatcagttctgtgctcaaagatccagacagcaatccatacagcttactt
gataatacagaatcagatcagactgcagacactgatgccagcgaatctcatcacagtact
aaccgtcgtaggcggtctcgtagacgaaggactgatgaagatgctgttctgatggatgga
atgactgaatctgatacagcttcagttaatgaaaatgggctagtcacagttgcagattat
atttctagagctgagtctcagagcagacaaagaaacctcccaagggaaactttggctaaa
aacaagaaagaaatggcaaaagatgtgattgaagaacatggtccttcagaaaaggcaata
aatggcccaactagtgcttctggcgatgaaattcctaagctacagcgtactccaggagaa
gaaaagattaataccttaaaagaagaaaacactcaagaagcagcagtcctgaatggtgtt
tcataa
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