Oryctolagus cuniculus (rabbit): 100340118
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Entry
100340118 CDS
T03373
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04270
Vascular smooth muscle contraction
ocu04360
Axon guidance
ocu04611
Platelet activation
ocu04625
C-type lectin receptor signaling pathway
ocu04810
Regulation of actin cytoskeleton
ocu05135
Yersinia infection
ocu05152
Tuberculosis
ocu05163
Human cytomegalovirus infection
ocu05200
Pathways in cancer
ocu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100340118
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100340118
04625 C-type lectin receptor signaling pathway
100340118
09153 Circulatory system
04270 Vascular smooth muscle contraction
100340118
09158 Development and regeneration
04360 Axon guidance
100340118
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100340118
05205 Proteoglycans in cancer
100340118
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100340118
09171 Infectious disease: bacterial
05135 Yersinia infection
100340118
05152 Tuberculosis
100340118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100340118
Membrane trafficking [BR:
ocu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100340118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
100340118
NCBI-ProteinID:
XP_008258809
Ensembl:
ENSOCUG00000005196
UniProt:
A0A5F9D7E5
LinkDB
All DBs
Position
1:complement(111460161..111622777)
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVIGHMSPVMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPVQRLLKEIQ
EAKRHIPQLQEQLSKATGPAQDGAIVTPSRPLGDALTVSDAEVDPGDGLSRTDCSSGDTS
RPSSDNTDSPRSGLKERISLEENTEKNEAIQDSDTQSLIGSPSTRITPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
IFLEFHQFFLDRSANLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRIILEKERACAEQIVAKIEEVLMTAQAVEEEK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKVRHPKHLSTPLSVSPEPQDSTKLRQSGLANEGSDIGY
APAGSVSSVASGAALSQEGGKENEMGSKPVGETPASGDSLDGTPRTPNTASDFPPPPLDQ
VQEEECEVERVIEHGTPKPVRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLSESPPCEGDNDEEEPPKLKVEHHSISVTGLQSPDRDLGLESSLISSKPQSHSLITS
GKSEVDDLFVTERQFAKERNTDGTLKDVGVNYQITIPDSHLSVSEERWALDALRNLGLLK
QLLAQQLGLTEKSTQEDWQHFPRQRTASRGAQADSGTQNSENIQAYHPGEGQIPVRTGTG
DIATCYSPRTSTESSAPRDSVVLASQDSQASSILVMDHMIMTPEMPTTEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTCLILDGYELMQESSTDEEVASSLALQ
PATGIPSADSPYPQQHSPQNAYSEEAVSPFSPEFLVQQRWGAMEDSCFEIQSPLSCADSH
SLIMEYIHKIEADLEHLKKVEESYTILCQRLAGSALADKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgaacgcagtaca
tcgcatgattttgatcccacagacagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaagatgacaat
ggatttgggttgacggtcagtggagacaatcccgtcttcgtacagtctgtaaaagaagat
ggagcagccatgcgggctggtgtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcgaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccgctcgccgattctgaa
gtagaaccatcagtcattggacatatgtctcctgtcatgacatcccctcattcacctgga
gcatctgggaatatggagagaatcactagtcctgtgcttatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacaaccgaacacctgtccaaagattgctaaaagagatccaa
gaggccaagagacacattcctcagctgcaagagcagttatccaaagccacaggccctgct
caggatggagccatagttacaccctccaggcctctaggtgatgccctgacagtcagtgat
gcagaggtggatcctggagatggactgagcaggactgattgcagcagtggagatacttct
cggccgagtagtgacaacacagatagtcccaggagtggcctgaaagagaggatttctcta
gaggaaaacacagagaaaaatgaagcaattcaggacagtgacactcagtcacttatcggg
agtccctcaacccgcataacacctcatattattggagcagaagatgatgattttggaact
gaacatgaacagattaatgggcagtgcagctgtttccagagcattgaactgctgaaatct
cgccctgctcatttggctgtttttttacaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacttgtataaacagaccaattccaaggaaactcgtcgc
atcttcctggagtttcatcagttcttcctggatcgatctgcaaatctgaaagtttcggtt
cctgatgaaatatctgtggatctagaaaagagacgaccagagcttatacctgaggatctg
catcgccactatatccagactatgcaagaaagagtccaccccgaagttcaaaggcacttg
gaagattttcggcagaagcgtagcatgggactgacgttggctgaaagtgaactgactaag
cttgatgcagagcgagacaaggaccgcatcattttggagaaggagcgggcatgtgcagaa
caaattgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagaaaag
agttccacaatgcagtatgttattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttagagcacaagcggggtcggattggattccttccaaaaatcaaacaa
agtatgaagaaagatagagaaggcgaagaaaaaggaaagcgaagaggattccccagtatc
ctgggacctccaaggagaccgagtcgccatgacaacagtgcaattggcagagccatggaa
ctgcagaaggtgcgccaccctaagcatttatccacacccttatctgtgagtcctgaacct
caggactctactaagttgcgccagagtgggttagcaaatgaaggatcagacattggatat
gcacctgccggttctgtgtcctctgtggcttcaggggctgctctttcccaggaaggagga
aaagagaatgagatgggatcaaagccagttggagaaacaccagcatctggagactccttg
gatggtacacctcgtactcccaatactgcctctgattttcctcctcctccattagaccaa
gtgcaagaggaggaatgtgaagtagaaagggtgattgaacatggaacaccaaaacctgtt
cgaaagtttgacagcatagcttttggagaaagtcaaagtgaggatgaacaatttgaaaat
gacttagagacagatccacccaactggcagcagcttgttagtcgagaagtgttactgggc
ctgaaaccttgtgagatcaaaagacaagaagtaattaatgaattgttctacacagaacga
gctcatgttcgaacactgaaagttcttgatcaagtgttttatcagcgagtgtccagagaa
ggaattttgtcaccttcagaactacggaagattttttcaaacttagaagatattcttcaa
cttcatattgggttgaatgaacaaatgaaggctgttcgaaagaggaatgagacctctgtt
attgatcaaattggggaagatttgctgacctggttcagtggaccgggagaagagaagctg
aaacatgccgctgccaccttttgcagtaaccagccttttgccctagaaatgatcaagtct
cgtcagaaaaaggactctcgattccagacttttgtacaagatgctgagagtaatcctctg
tgtcgtcgtctccagctaaaggatatcattcccactcaaatgcagaggcttaccaagtat
ccacttctgttggataatattgccaaatataccgaatggccaacagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaagctgtcaaggag
gcagaaaacaagcagcgcttagaagattatcagcgccgtcttgatacctccaatctgaag
ttgtcagagtacccaaatgtggaagagctcaggaatttggacttaacaaaaaggaagatg
attcatgaagggccattggtttggaaggtgaatagagataaaactattgatctgtataca
ttgctgctggaagacattcttgtattgttacaaaaacaggatgatagactggtgttaagg
tgtcacagtaagattctagcttccacagctgatagcaaacacacgtttagccctgtcatt
aagttgaatacagtgctggttcgacaggtggcaacagataacaaagctttatttgtcatc
tccatgtccgacaatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctcatctgtcggatggctgcatcagtgaaggagcagtccacaaag
ccaatcccattatcagagtctccaccttgcgaaggagacaatgatgaagaagaacctcca
aaattaaaagtggaacatcatagcatttcagtcactggtctgcagagtccagacagagat
ttgggattagaatcttccttaatatcatcaaaacctcagtctcattcactgattacttct
gggaaatcagaggtagatgatctctttgtgactgagagacaatttgcaaaggaacggaat
acagatggaacactaaaggacgttggagtaaattatcaaatcacaatcccagattcacac
ttgtctgtctcagaagaacggtgggctttggatgcactaaggaatttgggtttgttgaag
cagttgctggcacaacagctgggtttgactgagaagagcactcaggaagactggcaacat
ttcccaagacagaggacagcctctcggggggctcaggcagacagtggaacccagaactct
gaaaatattcaggcgtatcaccctggtgaaggacagatacccgttagaactggaactggt
gacattgcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattca
gtggtactggcatcccaagatagccaggcaagtagcattttagtaatggaccacatgatt
atgaccccagagatgcctaccacagagccagaagggggtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttacgcatctcaggaacctgtctgatccttgatggc
tatgaactcatgcaggagagctctacagacgaggaggtcgcctcctcactcgccctgcag
cctgccacaggcatcccctctgcagactctccctacccgcagcagcattcgccccaaaat
gcttattctgaggaggccgtttcacccttcagcccagaattcctggtccagcagcgctgg
ggagctatggaggattcctgttttgagatccagagtcctctgtcttgtgcagattcacac
agcctgatcatggagtacattcataagatagaggctgaccttgaacacttaaagaaggtg
gaagaaagttacaccattctttgccaaaggctggctggatcagccctcgcagataagcac
tcagataagagttag
DBGET
integrated database retrieval system
