Oryctolagus cuniculus (rabbit): 100340161
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Entry
100340161 CDS
T03373
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
100340161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100340161
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100340161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
100340161
NCBI-ProteinID:
XP_008262822
Ensembl:
ENSOCUG00000000613
UniProt:
G1SDP6
LinkDB
All DBs
Position
13:complement(47449293..47493130)
Genome browser
AA seq
1156 aa
AA seq
DB search
MEVVKCPEHGTLCFLKTGVRDGPNKGKSFYVCRTDTCGFARATDVPVSHCLLHEDFMVEL
QGLFSSQDKKDYRLFFRCTRSKAEGKHWCGNVPWQDPTYKERSVTSTSQRALEPCPHPYS
QPRNPFKVLDKNQEPGLWKQFLKGDGEGKMAAKKPKEKTGELLDQKKEQKPGSDCRLEKD
LSSGLVMKTQQSVVQGKKPEERKKPFQHMAKETEGTHSRNFSEMKSKQCRGTEPSRPSAP
PREKSAGESQGVQKESGLPGVKDTRAFPPKVHHPSPVAQPQAGGCLRKELPRNPEAGRTK
APGDPPAQSLQNGLPLGRSQPQSDTPVPAPEGQAAPRLSPREGRRAATSSDDSEQEDDVV
FVGSHPGSPLLFDTAPNSEKKQSLQLPAPSVERKLSPASVSKQMEPSDPAAQRVHLTTQL
RQKKSTLASVNIQALPDKGQKLFKQIQALEEALGALALSPEQGTDEKSNTHVPQPSNFTK
TTTDPPHLVPPLPLPGRDLQPVGSLGLNTAGEPGQSCGGHKNQDCLHAVWKITSEAIDEL
HRSLESRPGETAEAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTM
IALILTQNSQETKKEKDKNVALTWLSKDDSADFVSHGTLIICPASLIHHWKNEVEKRVKS
SRLRVYLYHGPNRNQHAKVLSTYDVVITTYSLVAKEIPTKKQEGEVPGAQLSVEGISTPL
LGVVWARIILDEAHNVKNPRVQTSIAVCKLKAHARWAVTGTPIQNNLLDMYSLLKFLRCS
PFDDFNLWKSQVDNGSKKGGERLSILTKSLLLRRTKDQLDSSGRPLVTLPQRKFQLHRLE
LSEDEETVYNVFFARSRSALQSYLKRHESGSSLSGRSPDNPFSRVAQEFGSSGPGSSMAA
DSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHDP
VPSPTVSLNGTCFKVELFEDTRESTKIASLLAELEAIRSNSKSQKSVIVSQWTSMLKVVA
LHLKRHGLTYATIDGSVNPKQRMDLVEAFNRSSGPQVMLISLLAGGVGLNLTGGNHLFLL
DMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSAE
SVTKLTLADLKVLFGI
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagttaagtgcccggagcacgggactttgtgctttctgaagaccggcgtccgc
gatggccctaataagggaaagagcttctacgtgtgccgaacggacacgtgcggcttcgcg
cgggcaaccgacgttcctgtttctcattgtttattgcatgaggacttcatggtggaactt
cagggtttgttctcatcacaagacaagaaagactacaggttgttcttccgatgcactagg
agtaaggcagaggggaagcactggtgtggaaatgtcccctggcaggatcctacttacaag
gaacgttctgtaaccagcacgtctcagcgtgctctggagccatgccctcatccttacagc
caaccacgaaacccattcaaggtgctggacaagaatcaagaaccgggtctctggaagcag
ttcctcaaaggggacggtgagggaaagatggctgccaagaagccgaaggaaaagactggc
gagctcttggatcaaaagaaggaacagaagcccggatctgattgccggctggagaaagat
ctctcatctggcctggtgatgaagacacaacaatctgtagttcaagggaagaagcccgag
gagagaaagaagccgtttcagcacatggccaaggagactgaaggcacgcacagcagaaac
ttttctgaaatgaaatccaagcagtgtcggggaactgagccgagcagaccatctgcgcct
ccccgggaaaagtcagctggtgagagtcaaggtgtccagaaagaatcggggcttccagga
gtaaaggacactcgggcttttcctccgaaggttcaccatccgagcccagtggcccagccc
caggcaggcggctgcctccgcaaggagctcccccggaacccggaggctggcagaacaaag
gctcccggcgatcctccagcccagtctctccagaatgggctgcccctggggcgttcccag
ccacagtccgacacgccggtgcctgcccccgaaggacaggcagctccacggctgtcccca
cgagaggggcgccgagctgccaccagcagtgacgacagcgagcaagaggatgacgttgtt
tttgtcggctctcatccaggcagccccttactctttgacacggctccaaactcagagaag
aagcagagccttcaactccctgccccgagcgtggagagaaaactctctcctgcctcagtt
tccaagcaaatggaaccctccgaccctgcagcccagcgcgtgcacctgacaacacaactg
agacagaagaagagcacactggcatccgtgaacatccaggctcttccagacaagggtcag
aagttgttcaagcaaatacaggcgctggaggaagcactcggcgctcttgccctctcccca
gaacaaggaactgatgagaagagcaacactcacgtaccacaaccgagtaacttcaccaaa
actaccactgaccctccccacttggtgcctcccctaccacttccgggtcgtgatctccaa
cctgtgggttctctaggactaaacaccgctggagaaccaggtcagtcctgtggaggccac
aagaaccaagattgccttcacgcagtgtggaagatcaccagtgaagccatcgatgagctg
catcgatccctcgagtcccgtcctggagagacagctgaggcagaagatccggctgggctg
aaggtccctctgctgctgcaccagaagcaggcattggcctggttactctggcgggaaagt
cagaagccacaaggaggaattctggcggatgatatgggtttgggaaaaaccctgacaatg
attgccctcatcctgacccaaaatagtcaagagacaaagaaagaaaaggacaaaaatgtg
gctttgacatggctttctaaagacgactccgctgactttgtctcccatgggacactgatc
atctgccctgcttccctgatccatcactggaagaatgaggtagagaaacgtgtgaagagc
agcagactgagagtctacctctaccacgggcccaaccggaaccagcacgccaaagtcctc
tcgacgtacgacgttgtgatcactacctatagccttgtggccaaggagattcccacaaag
aagcaggagggcgaggtcccaggagcacagctcagtgtggagggcatttcaacacctttg
cttggagtagtctgggctcggatcatattggatgaagctcacaatgttaagaatccccgc
gtgcaaacgtcgatagctgtgtgtaagctgaaggcgcatgcccgttgggctgtcactgga
acccccattcaaaacaacttgctggatatgtattccctgctgaaatttcttcgttgttct
ccatttgacgatttcaatctgtggaaaagtcaggttgacaatggttcaaagaaaggagga
gaacggttaagtattttaaccaagagccttttgctgaggagaacaaaagaccaactggat
tcctctggcaggcctttggtgaccctgccccagcgtaaatttcagttgcaccgtttagag
ctttccgaagatgaagagactgtttacaatgtcttttttgcaagatcaaggtcagctctg
cagtcctatctaaaacgacatgagagtggaagcagcctatcaggaagaagtcctgataat
ccgttcagcagagtggcccaggagtttgggtccagtgggccaggatcctccatggcagca
gactcaccgaggtccagcaccgtccacatactgtcccagttgctgagactccgccaatgt
tgctgtcatctttctttactgaagtcggccctggacccaacagaactgaagagcgaaggc
cttgtcctatccctggaagagcagctcagcgctttgaccttgtccgaactccatgatcca
gtcccatcgcctacggtttcccttaatggcacctgcttcaaggtggagctttttgaagac
acacgcgagagcaccaagatagcatctctgttggcagaactggaggccatccgaagcaat
tcaaagtcccaaaagagtgttattgtctctcagtggaccagcatgctgaaagttgtagca
ctgcacctcaagaggcatggcctgacttacgccaccatcgatggctccgtcaaccccaaa
cagagaatggatttggtggaggcatttaaccgctccagtggccctcaggttatgctgatc
tctctcttggctggaggtgttggtctaaacctgactggaggaaaccatctctttcttttg
gacatgcactggaatccatcacttgaggatcaagcttgcgaccggatttaccgagtcggg
cagcagaaagatgttgtcattcacagatttgtgtgtgagggaacagtggaagagaagatc
ttgcagctccaagagaaaaagaaggatttggccaaacaggttctatcaggatctgcagaa
tctgtcaccaagctcaccttggcggacctcaaagtcctttttggcatctaa
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integrated database retrieval system
