Oryctolagus cuniculus (rabbit): 100340192
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Entry
100340192 CDS
T03373
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100340192
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100340192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100340192
Spliceosome [BR:
ocu03041
]
Common components
Common spliceosomal components
SR proteins
100340192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
100340192
NCBI-ProteinID:
XP_008246794
Ensembl:
ENSOCUG00000009274
UniProt:
G1SWW7
LinkDB
All DBs
Position
20:complement(2250357..2255199)
Genome browser
AA seq
276 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS
WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGS
KRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSKSRSVSRSPAPEKSQKR
GSSSRSKSPASVDRQRSRSRSRSRSRSRSRSVDSGN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgtcgagtgttcatcgggaggctaaatccggcggccagggagaaagacgtg
gagaggttcttcaagggctacggacggataagggatattgatctgaaaaggggttttggt
ttcgtggaattcgaggatcccagggatgcagatgatgccgtatatgaacttgatggaaaa
gaactttgcagtgaaagggtaactattgaacacgctcgggctcggtctcgaggtggaaga
ggtagaggacgatattctgaccgatttagtagtcgcagacctcgaaatgatagacgaaat
gctccacctgtaagaacagaaaatcgacttatagttgagaatttatcctcaagagtcagc
tggcaggatctcaaagatttcatgaggcaagctggggaagtaacctttgcggatgcacat
cgacctaaattaaatgaaggggtggttgagtttgcctcttatggtgatttaaagaatgct
attgaaaaactttctggaaaggaaataaatgggagaaaaataaaattaatcgaaggcagc
aaaagacacagtaggtcaagaagcaggtctcgatcccggaccaggagttcctctaggtct
cgtagccggtctcgttcccgtagtcgcaagtcttacagccgttcaagaagcaggagccgg
agccgaagcaaatctcgttctgttagtaggtctcctgcgcctgagaagagccagaaacgt
ggttcttcaagtagatctaagtctccagcatctgtggatcgccagagatccaggtccagg
tccaggtccaggtccaggtccaggtccagatcagttgacagtggcaattaa
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