Oryctolagus cuniculus (rabbit): 100340347
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Entry
100340347 CDS
T03373
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100340347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100340347
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100340347
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100340347
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100340347
Exosomal proteins of colorectal cancer cells
100340347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
100340347
NCBI-ProteinID:
XP_002720787
Ensembl:
ENSOCUG00000015505
UniProt:
G1T9L2
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLELNETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
VPLSQIVFVEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFHR
RLSEEMIQRRWENMPVSQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLESLKLP
VRLRVFDSGVMVIELQSHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagctcaacgagaccctggtgatccag
cagcgcggggtgcgcatctacgacggcgaggagaagataaaatttgatgctgggaccctc
cttcttagtacacaccgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
gttcctctttcccaaattgtgttcgttgaggaacaggcagctggaattgggaagagtgcc
aagatagtggttcatcttcatccagctccttctaacaaagagcctggcccattccagagc
agtaagaactcctacatcaaactctctttcaaggagcatggccagattgagtttcacagg
cgtttatcagaggagatgatacagagaagatgggagaatatgccagtttcccagtcatta
caaacaaatagaggaccccagccaggaagaataagggctgtaggaattgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaacggacaaaaacatttctgaggcttttgaagac
ctcagcaagctgatgatcaaggctaaagaaatggtggagttatcaaaatcaattgctaat
aaaattaaagacaaacaaggtgatatcacagaagatgagaccatcaggtttaaatcctac
ttgctgagcatgggaatagccaacccggttaccagggaaacctatggctctggcacacag
taccacatgcagctggctaaacagctggctggaatattacaggcgcctttagaggaacga
ggaggaataatgtcactcacagaggtgtactgtttagtaaaccgggctcgaggaatggaa
ttgttgtcaccggaagatttagtgaatgcctgcaagatgctggaatcgctgaagttaccc
gtcaggctccgagtttttgacagtggcgtcatggtaattgagcttcagtcccacaaagaa
gaggaaatggtggcctcagccctggagacagtttcagaaaggggatccctaacatccgaa
gaatttgctaagctcgtgggaatgtctgtcctcctggccaaggaaaggttgcttcttgca
gagaagatgggccatctttgccgagatgactcagtggaaggcttgcgattttacccaaat
ttatttatgacacagagctaa
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