Oryctolagus cuniculus (rabbit): 100340347
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Entry
100340347 CDS
T03373
Symbol
VPS36
Name
(RefSeq) vacuolar protein sorting 36 homolog
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100340347 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100340347 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100340347 (VPS36)
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100340347 (VPS36)
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100340347 (VPS36)
Exosomal proteins of colorectal cancer cells
100340347 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
GRAM
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
100340347
NCBI-ProteinID:
XP_002720787
Ensembl:
ENSOCUG00000015505
UniProt:
G1T9L2
LinkDB
All DBs
Position
Un
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AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLELNETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
VPLSQIVFVEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFHR
RLSEEMIQRRWENMPVSQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLESLKLP
VRLRVFDSGVMVIELQSHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagctcaacgagaccctggtgatccag
cagcgcggggtgcgcatctacgacggcgaggagaagataaaatttgatgctgggaccctc
cttcttagtacacaccgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
gttcctctttcccaaattgtgttcgttgaggaacaggcagctggaattgggaagagtgcc
aagatagtggttcatcttcatccagctccttctaacaaagagcctggcccattccagagc
agtaagaactcctacatcaaactctctttcaaggagcatggccagattgagtttcacagg
cgtttatcagaggagatgatacagagaagatgggagaatatgccagtttcccagtcatta
caaacaaatagaggaccccagccaggaagaataagggctgtaggaattgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaacggacaaaaacatttctgaggcttttgaagac
ctcagcaagctgatgatcaaggctaaagaaatggtggagttatcaaaatcaattgctaat
aaaattaaagacaaacaaggtgatatcacagaagatgagaccatcaggtttaaatcctac
ttgctgagcatgggaatagccaacccggttaccagggaaacctatggctctggcacacag
taccacatgcagctggctaaacagctggctggaatattacaggcgcctttagaggaacga
ggaggaataatgtcactcacagaggtgtactgtttagtaaaccgggctcgaggaatggaa
ttgttgtcaccggaagatttagtgaatgcctgcaagatgctggaatcgctgaagttaccc
gtcaggctccgagtttttgacagtggcgtcatggtaattgagcttcagtcccacaaagaa
gaggaaatggtggcctcagccctggagacagtttcagaaaggggatccctaacatccgaa
gaatttgctaagctcgtgggaatgtctgtcctcctggccaaggaaaggttgcttcttgca
gagaagatgggccatctttgccgagatgactcagtggaaggcttgcgattttacccaaat
ttatttatgacacagagctaa
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