Oryctolagus cuniculus (rabbit): 100340366
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Entry
100340366 CDS
T03373
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X3
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04512
ECM-receptor interaction
ocu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100340366
04518 Integrin signaling
100340366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ocu04091
]
100340366
Lectins [BR:
ocu04091
]
C-Type lectins
Lecticans
100340366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
100340366
NCBI-ProteinID:
XP_002708133
Ensembl:
ENSOCUG00000010379
UniProt:
G1SZ70
LinkDB
All DBs
Position
1:53057395..53329275
Genome browser
AA seq
2182 aa
AA seq
DB search
MNPLSRGGLHVLLLLLLLGWASPTFVSVNRGLRVMKGSSAFLSADDLKLAVPKEKDACKV
EVVMNEPITQRVGTLTPQVFDCHFLPNEVKYTHNGCPLLDEDTVKLRLYRFTETDTFTET
FILRVYLLEPDCNIIRMSGNALEVSEFYGLSRAIDKNLLRFEYDRMASLECTIRLDPVKT
RLPAHGQMVLVESWPEEPRGDQPHGFFPESRLGTELKCPGGRCALGLKKIGSLSVSCEEF
LLMGLRYHHTAPPSPNVDYISIQLHLTDSRSKIVYKSENVWLPVYIRAGIPNQIPRAAFM
ATFILEVDQFILTSLTTSVVDCEEDETPKPLLVFNVTKAPLQGYVTHLLDHTKPISSFTW
RDLSDMQVAYQPPNSSHPERRHYELELEVYDFFFGRSTPITVHISIRTADTNAPRVSWNT
GLNLLEGQSRAITWEQFQIVDNDDISAVRLVTVDGLQHGRLTLRGGKAFLFTVADLQAGV
VRYHHDDSDSTKDFVVFRIFDGHHSIGHKFPINILPKDDSPPFLITNVVIELEEGQTILL
QGSMLRASDVDSSDDYIFFNITTAPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIYYRH
FGEEIFEDSFEFVLWDSHEPPNLSVPQVVAIHITPVDDQLPKEAPGVSRHLVVNETEVAY
VTKKHLYFLDTESHDGELLYTITTPPFFSFSHRYLDAGKLFMVDSIPKLTKNPAALGLKS
FTQHAVNYLKVAYMPPLQDIGPHVRHVQFTFSISNQHGGTLHGICFNITILPVDNQAPEV
FTNPLRVTEGGQHVISTEHILVSDVDTVQDNIYFSLQRQPLHGGVELDGFPLNPGDTFSW
GDLCTLKVRYQHDGSEVLQDDIVLEVTDGTNSAEFVLHVEVFPVNDEPPVLKADLVPVMH
CSEGGEVVITPEHVFATDVDSDDLKLMFVVVRAPEHGVVSKAGVPVVQFSQSDVIAGAVT
YKHTGGEIGLLPCFDTISLVVSDGDAGPSVNGCCYNGPNPSVPLHESFPVYALNITVHPV
DNQPPSLTIGTMFFVDEGLSATLTINHLLSTDPDTAEDDLEFILVSSPQFGYLENTLPSV
GFEKSNMGISIASFQWKDLKALHINYVQSRHRRIEPTADQFVVYVTDGKQRSLEIPFYVT
INPTNDEAPDFVVQNITVCEGQRKELDSSIIHAADLDIPEDLLLLSIVRKPRHGLLISEV
FSKDFPQKKQPANPHQKHEPVYNFSMELLRNGMRLAYVHDDSESLADDFTIQVSDGKHKI
LKTISVEVTPVNDEKPTLSKKAEIAVSMGETRIISSAVLSAVDEDSPREKIYYLFERLPQ
NGQLQLKTGRDWVPLYPGMKCTQEEVDLNLLRYTHTGSMDSQNQDGFTFYLWDGDNQSPA
FDCHISIKHMGKGEIVIHAKPLVVSNGDRGFLTTTTLLAVDGTDKPEELLYVITSPPQYG
QVEYVRYPGVPITSFSQMDIAGQTVCYIHRSKAAVPSDTFRFIVSNGLQTKHGVFQITLE
AVDRALPVVTRNKGLRLAQGATGLLSPDLLQLADPDTPVENLTFLLAQLPQHGQLYLQGT
VLLQLNFTQQDVDGGNVAYQHLGGDSQSDCFTFVATDGTNQGFVVDGRVWEEPVSFTIQV
DPLDRTAPRLTLLQCASQVELLKNGCYGIYLTSRVLKASDPDTEDERIIFKILRGPQHGH
LENVTTGEFIHEQFSQRDLRRKTILYIISPSLKEVTSDLVEFQIMDPSGNSATPQILELK
WSHIEWSRTEYEVCENVVVLPLEITRRGYSMDSAFVSIKVNQVSATVGKDFTVTPSKLIQ
FDPGMSTKTWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKATVKILDSKGGRCHPSY
SSKQSQHDTWEQGIWPPLPPGSSSPTASGSFHLEGRPFPSSKWQAVTRGDSLRGFDATHH
HRSQRKLGAHGNGKTIRPSSVYRNGTDIVYKYHGMVSLKLEDDSFPAHKRQAKVSIINQP
QKTIRVAELPQADKMESTMDSHVPRQDQLPSFPKNCTLDLKGLFHFEESIQKLYECNGIA
WKAWSPQTKAVEDKSCPTGWQHHSGYCHTLITGRKETWEAAMQACREQHLGSLVSVFSRQ
HMRWLWDISGRKPFWIGLNDQVHAGHWEWIGGEPVTFTSWRRGPPQRTKPGRSCVLVQRL
GKWQPKDCRKGKLHNYVCSRKL
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctctgagccggggtgggctgcatgttttgctgctgctgctgctcctgggctgg
gccagccccaccttcgtcagtgttaatcgcggcctgagagtgatgaagggcagctcggct
ttcctgtcagcagatgacctgaagctcgccgtccccaaagagaaggatgcctgcaaggtg
gaagtggtgatgaatgagccaatcacccagagagtgggcacgctcactccccaggttttt
gattgccatttccttcccaatgaagtaaagtatacacacaacggctgcccacttcttgat
gaagacacagtgaagcttagactttacagatttactgaaacagacaccttcacggaaacc
tttatcctgcgggtctacctgctggaaccagactgtaacatcatccgtatgagtggcaat
gcactggaggtgtctgaattctacggcttgtcccgagcaatcgacaagaacctactcaga
tttgaatatgacaggatggctagcttggaatgtaccatcaggctggaccctgtgaagact
cggttgccagcacatggccagatggttctggtggagtcttggccagaagaaccccgtgga
gatcagccacatggttttttccctgagtcccgtctggggacagaactgaagtgtccaggt
ggccgctgtgccctggggctgaagaaaataggaagtctcagcgtgagctgtgaggagttc
ctgctgatggggcttcgctatcaccatacagctcccccttcgcccaacgttgactacatc
tccatccagctgcacctcacagacagcaggagtaaaatcgtgtacaagtcagagaacgtg
tggttacccgtctatatcagagctggcatcccaaatcagattccaagggctgcattcatg
gccacgttcatcctggaagtggatcagttcatcctgacctctttgactacatcggttgtg
gactgtgaagaggatgagacccccaagcccttgctggtgttcaacgtcaccaaagcccca
ctccagggctatgtgactcacctgttggaccacaccaaacccatctcctcattcacctgg
agagacctcagtgacatgcaggttgcctaccagcctccaaacagcagccatcctgagagg
agacactacgagctggagttggaggtctacgacttcttctttggaaggagcacacctatc
acagtccacatctccatcagaactgcagataccaatgccccccgagtctcctggaataca
ggacttaatctactggagggtcagtctcgggccatcacatgggaacagtttcagattgtt
gacaatgatgacataagtgctgtccgcttagtcactgttgatggtctacagcatggacgg
cttacattaagagggggaaaggcatttctcttcaccgtggctgacctgcaggctggagtt
gttcgctatcaccatgatgacagcgactccaccaaagactttgtggtcttcaggatattt
gatggccatcacagcatcggtcacaagtttcctatcaacatcttgcccaaagatgatagt
cctccgttcctcataaccaatgtcgtgattgaactggaagaggggcagaccatcctgctc
cagggctccatgctcagagcttcagacgtggactccagtgatgactacatcttctttaac
attacaacagccccacaggctggcgagatcatgaagaagccagggcctggtctgataggt
tatcctgtccctggcttccttcagagggatctctttaatgggattatttactatcgtcat
tttggtgaagaaatctttgaagattcctttgaatttgtcctatgggacagccatgaacct
ccgaatctctcagtgccacaggtggtggcaatccacatcactccagtggatgaccagctt
ccaaaagaggctcctggagtttctcggcatttggttgtcaacgagacagaggttgcctac
gtaaccaagaaacatctgtacttcctagatacagaatcacacgatggggagctgctctac
accatcaccactcccccatttttctccttcagccacagatacttggatgctgggaagtta
ttcatggtagacagcataccaaagctaaccaaaaatcctgctgccctgggactgaagtca
ttcacacagcacgctgtgaactacctgaaagtggcctacatgccccctctgcaggatata
ggccctcatgtcagacacgtccagttcacgttttccatcagcaaccagcacggcggcact
ttgcatgggatctgttttaacattaccattctcccagtggacaatcaagctcctgaggtg
ttcaccaaccctctgagagtgactgagggaggtcagcatgtcatcagcacagagcacatc
ctggtctctgacgtggacaccgtgcaggacaacatctacttctccctacagagacagcct
ctgcatggaggggtggagcttgatggctttccgttaaaccccggggacaccttttcctgg
ggagacctctgtaccttaaaagttaggtatcaacatgatggatctgaggttcttcaggat
gacatagtcttggaggtcacagatggcacaaattcagcagaatttgttctacacgttgag
gtattccctgtaaatgacgaacccccggtcctgaaggctgacctcgtccccgtgatgcac
tgctccgagggtggggaggtggtcatcacccctgaacatgtttttgccactgatgtggac
agtgatgacctgaagctgatgtttgtggttgtgcgagcacctgagcatggggtagtgagc
aaagctggagtccctgtggttcagttctctcagagcgatgttatcgcaggggctgtgaca
tataaacacacaggtggcgagattggcctcctgccttgttttgacaccatctcgttggtg
gtttcggatggagatgctggcccttctgtgaacggctgttgctacaacggacctaatcca
tctgttcctcttcatgagtccttcccagtgtatgctcttaacatcacagtgcatccagtg
gacaaccagccaccttcgcttacaatcggtaccatgttctttgtagatgagggtttgtca
gcaacccttaccattaaccatttgctctccaccgatcctgacactgcagaagatgacttg
gaattcattttggtttcttcaccccaatttggctatctggaaaacacacttccttctgtg
ggttttgaaaagagcaatatgggcataagtatagcttcatttcagtggaaagacttgaag
gctttgcacattaattatgtgcagtccagacatcggaggatagaaccaactgccgatcag
tttgtggtgtatgtcacagatggaaagcaacgctccttggagataccattttatgttaca
atcaatcccacaaatgatgaagctcccgactttgtggtgcagaatatcactgtgtgtgaa
ggtcagaggaaagagctggactcttccatcatccacgctgctgacctggacattcctgag
gacctcctactgctcagcatcgtacgcaaaccacgtcacggcctcctcatcagtgaggtg
ttcagcaaggacttccctcagaagaagcagccagccaaccctcaccagaagcatgaacct
gtttacaacttttccatggaacttctaaggaatggaatgaggttggcatatgtgcacgat
gactcagagagccttgctgatgactttaccatccaggtgtcagatgggaaacataagata
ctcaaaaccatttcagtagaggtcaccccagtgaatgatgagaaaccaacactgagcaag
aaggctgaaattgctgtgagtatgggggaaacccgtatcatctctagcgctgttctttcg
gctgtagatgaagactcacccagggagaagatttactacctatttgaaagacttccccaa
aatgggcaacttcagcttaagacagggagggactgggtccctctctaccctggcatgaaa
tgcactcaggaggaagtggatctgaacctgctgagatacacacacaccgggtcaatggat
tcccagaatcaagatggtttcaccttctacctctgggatggtgacaatcagtcccctgca
tttgactgtcacatcagcatcaagcacatgggaaaaggtgaaattgtcattcatgcaaag
ccacttgtggtgtctaatggtgacagaggtttcttgacgaccaccacgctcctggctgtg
gatgggacggacaagcctgaggagcttctctatgtcatcacttccccaccacaatacggg
caggtagaatatgtccgctatcccggagtccccattacaagcttcagccagatggacata
gctggacagacagtctgctacatccataggagcaaggctgctgtccccagtgacacattc
agattcatcgtcagcaatggactgcagaccaagcacggggtgtttcagatcacactggag
gctgtggacagagccctgcctgtggtgaccaggaataaggggttgagactggcccaaggg
gcaacgggcctgctttcccccgacctcctccagctggccgaccctgacacgcctgtggag
aacctcaccttcctcctggcccagctcccacagcatggccagctctacctgcagggcacc
gtgctccttcaactcaattttactcagcaggatgtggatggtggcaatgtggcctatcag
cacttgggaggggactcccagtcggactgctttactttcgtggccacagatgggacaaac
caaggctttgttgtggatgggagagtgtgggaagaacctgtttcatttaccattcaggtg
gaccctttggacagaacagccccccggctcacgctcttgcaatgtgcttctcaagtggag
ctcctgaaaaatggctgctatggcatttacctcacttcccgcgtcctgaaggcctcggac
cctgacacggaggatgagcggatcatctttaagattttacgaggcccacaacatggacat
ctggagaatgtgacaacaggtgaatttattcatgaacaatttagccaaagggacctacgc
agaaagaccatcctttacatcataagcccatctttgaaggaagtgacttcagacctggtg
gagtttcaaatcatggaccccagtgggaactctgccactcctcaaatattggagttgaag
tggtctcatatcgaatggtcacggactgaatacgaggtctgtgagaatgtggttgtgttg
cccttggaaattaccagaagaggatattccatggactcggcctttgttagtataaaggtc
aaccaagtgtcagcaacagttgggaaagatttcactgtgactccatctaaactgatccag
tttgatccaggaatgtcaacgaagacgtggaatatagcaattacctatgacggattggag
gaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggcaca
aagacaaaagccacagtgaaaattttggactcaaaaggaggacggtgccatccttcgtat
tcctccaagcaaagccagcacgacacatgggagcagggcatttggcccccgctgccccca
ggatcttcctcacccaccgcctctggttcctttcatctggaaggaagaccctttccatct
tccaagtggcaagcagtcaccaggggtgacagcctgcggggctttgatgccacacatcat
catcgttctcaaaggaagctgggggcccacgggaatggcaaaacaattcgtccatcctct
gtttatagaaatggaacagacatcgtctataaatatcatgggatggtttccttgaaactg
gaagatgacagtttcccagctcacaaaaggcaggccaaagtatccatcattaatcagcca
caaaagacaatcagagtggcagaactgccgcaggcagataagatggaatccacaatggat
tcacacgtccccagacaggaccagttgccttcatttccaaagaactgcactctggattta
aagggcctcttccattttgaagaaagcattcaaaagctgtatgagtgcaatgggattgcc
tggaaagcctggagcccccagaccaaggcggtggaagacaaatcctgccccactggatgg
caacatcactcaggctactgtcacacattgatcacagggcggaaagagacgtgggaagca
gcgatgcaagcttgcagggaacaacacttgggcagccttgtgagtgtgttttccagacag
cacatgagatggctctgggacatcagtggaagaaagcccttttggataggtttgaacgac
caagtgcatgccggccattgggaatggattggtggtgaacccgtcaccttcacctcctgg
aggagagggccccctcagcgcacgaagcctgggagaagctgtgttttggttcaaagacta
gggaaatggcaaccaaaggactgtaggaagggcaagctccacaattatgtgtgctccagg
aaactctaa
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