Oryctolagus cuniculus (rabbit): 100340393
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Entry
100340393 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100340393
03015 mRNA surveillance pathway
100340393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100340393
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100340393
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100340393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100340393
NCBI-ProteinID:
XP_002711765
Ensembl:
ENSOCUG00000004095
UniProt:
A0A5F9CDT8
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All DBs
Position
5:complement(29115233..29182214)
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AA seq
484 aa
AA seq
DB search
MAGATGRFRGRAMGRFPLTLPVADLSNLHLKDEKIKPDANGAVVKTNANTENTDEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELA
LQTGKVIEQMGRFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcgactggccgtttccgaggtcgagccatggggcggtttccgctcaccctg
ccggtggccgatttgagcaacttgcatcttaaggacgagaaaatcaaaccggatgccaat
ggtgctgttgtcaagaccaatgctaatacagagaacacagatgaagaagaaaaagaggac
agagctgcccagtcattgctcaacaaactgatcagaagcaaccttgtggataacacaaac
caagtggaagtcctacagcgggatcccaactcccccctctactctgtgaagtcttttgag
gagctccggctgaaaccgcaacttctccagggagtctatgccatgggtttcaaccggcca
tccaagatccaagagaacgctttgcctttgatgcttgctgaacccccacagaatttaatt
gcccagtctcagtctggtactggtaaaacagctgcttttgtgttggccatgctcagccaa
gtggaacctgcgaacaaatatccccagtgtctgtgcctttccccaacatatgaacttgcc
cttcaaaccggaaaagtgattgagcagatgggcagattttaccctgaactgaaactagct
tatgctgttcgaggcaataaattggaaagagggcagaagatcagtgagcagattgtcatt
ggcaccccagggactgtcctggactggtgctccaaactcaagttcattgaccccaagaag
atcaaggtgtttgttctggacgaggctgacgtgatgatagccactcagggccaccaggat
cagagcatccgcatccagaggatgctgcccaggaactgccagatgctccttttctctgcg
acctttgaagactctgtgtggaagtttgcccagaaagtggtcccagacccgaacattatc
aaactgaagcgcgaggaggagactttggataccatcaagcagtactacgtcctgtgcaac
aacagagatgagaagttccaggccctgtgcaacctgtatggggccatcaccatcgctcag
gccatgatcttctgccacacccgcaaaacagccagctggttggcagcagagctgtcaaag
gaaggccaccaggtggccctgctgagcggagaaatggtggtggagcagagagcagccgtg
attgagcgcttccgagagggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgc
ggtatcgatgttgaacaagtgtctgtcgtgatcaactttgatcttcccgtggacaaggat
gggaacccagacaatgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
aggggcctggccgtgaacatggttgacagcaagcacagcatgaacatcctgaacagaatc
caggagcattttaataagaagatagaaagactggacacggatgatttggatgagattgag
aaaatagccaactga
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