Oryctolagus cuniculus (rabbit): 100340496
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Entry
100340496 CDS
T03373
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100340496
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Major cadherins
100340496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
DUF443
Motif
Other DBs
NCBI-GeneID:
100340496
NCBI-ProteinID:
XP_017200150
Ensembl:
ENSOCUG00000007832
UniProt:
G1STX1
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Position
11:43019719..44109802
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLQPQPRQTLTTEPRENVLRLPGRRLHFQRVKRGWVWNQ
FFVLEEYMGAEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPRFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPVGSAVGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIITDEETQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGDSYFTIDGTEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNIVINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVSAADRDLSPAGQQFSFRLSPEAAIKPNFTV
RDFRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPIQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEENKIRRDIKPDTFCLPRQRPPVEDNTDIRDFINQR
LQENDVDPAAPPYDSLATYAYEGSGSVAESLSSIDSLTTEADQDYDYLTGWGPRFKVLAD
MFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatcactgcttctctgggtcctgtttgatggaggtctccta
acaccacttcaaccacagccacggcagactttgaccacagaaccaagagaaaatgttctc
cgcctgccaggacgacgattacattttcaacgagttaaacgtggctgggtatggaatcaa
ttttttgtgctggaggaatacatgggcgccgagcctcagtatgttggaaagctccattct
gacttggacaagggagagggcactgttaaatataccctctcaggagatggtgctggcaca
gtttttaccattgatgaaaccactggggatattcatgcaataaggagcctggatagagaa
gaaaaacctttctacacccttcgtgctcaggctgtggatatcgaaaccaggaagcctctg
gagcctgaatcagagttcatcatcaaagttcaggacattaatgacaatgagccacggttt
ttggatggaccatacgttgccagtgttccagaaatgtctcctgtgggtgcatatgtgctc
caggtcaaggccaccgatgcagatgaccccacctatggaaacagtgccagagtcgtttac
agcatccttcagggacaaccttatttctctattgatcccaagacaggtgttattagaaca
gctttgccaaacatggacagagaagtcaaagagcaataccaagtacttatccaagccaag
gatatgggaggacagctgggaggcttagctggcacaacgattgtcaacatcaccctcact
gatgtcaatgacaatcctcctcgattccccaaaagcatcttccatctgaaagttcctgag
tcttcccctgttggttcagctgttggacgaataagagccgtggatcctgactttggacaa
aatgcagaaattgagtacaatattgttccaggagatgggggaaacttgtttgacatcatc
acagatgaggagacacaagaaggagtcatcaaactgaaaaagccattagattttgaaaca
aagaaggcatatacatttaaagtagaggcctccaacttgcacctagatcaccggttccac
tcggcaggcccttttaaagacacagccacagtaaagatcagcgtgctggatgtcgatgag
cccccagtttttagcaagccattgtacactatggaggtgtacgaagacactcccgtcggg
accatcatcggtgctgtcacagcgcaagaccttgatgtgggcagtagtgccgttaggtac
ttcatagattggaagagtgatggggacagctactttacaatagatggaactgaaggaacc
atcgccactaatgaattactggacagagaaagcactgcacagtataatttctccataatt
gcgagtaaagttagtaatccattattaaccagcaaagtcaacatagtgattaatgtccta
gatgtcaatgaatttcccccagaaatatctgtcccatatgagacagctgtatgtgaaaat
gccaaaccaggacagataattcagatagtcagtgctgcagaccgagatctttcacctgct
gggcagcagttctcctttagattatcacctgaggctgccatcaaaccaaattttacagtc
cgtgacttcagaaacaacacagctggaattgaaacccgaagaaatggatacagccgcaga
cagcaagagttgtatttcctccctgttgtaattgaagacagcagttatcccattcagagc
agcacaaacacaatgactattcgagtttgtagatgtgactcagatggtaccatcttatcc
tgcaacgtggaagcaatttttctgcccgtaggacttagcactggggctttgattgcaatt
ctactctgtattgttatactattagccatagttgtgctgtacgtagcgctgagaaggcag
aagaagaaagacaccctgatgacctcgaaagaagacatcagagacaatgtcatccactac
gatgatgagggaggtggggaagaggacacccaggccttcgacatcggggctctgaggaac
cctaaagtgattgaagagaacaaaattcgcagggatataaaaccagacaccttctgttta
cctcggcagagaccgccagtggaagacaacacagacataagggatttcattaatcaaagg
ctgcaggaaaacgatgtggacccagctgccccaccctatgactccttggccacatacgcc
tacgaaggcagtggatcggtggccgagtccctcagctccatagactcgctcactaccgag
gccgaccaggactacgactatctcacaggctgggggccgcgcttcaaagttttggcagac
atgtttggtgaagaagagagttataaccctgataaagtcacctag
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