Oryctolagus cuniculus (rabbit): 100340506
Help
Entry
100340506 CDS
T03373
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04514
Cell adhesion molecules
ocu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100340506 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100340506 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocu00535
]
100340506 (SDC3)
Proteoglycans [BR:
ocu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100340506 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
100340506
NCBI-ProteinID:
XP_051714172
LinkDB
All DBs
Position
13:135317378..135353345
Genome browser
AA seq
575 aa
AA seq
DB search
MRLRGAARLPGSERPPCGGARGAGGRAEPGTAAAGGARARPAPRPSSRSARAGGGPAAAA
AAAAAAAAHASCGRGRCGRGAARRSRAAEPEPRAEPRVAPAAGPRRRRAAAPRRASGTKA
PPPAARAAAAAMKPGPPHRAGAAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGAQR
WRSENFERPVDLEGSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFSPDMALAVST
TPAVLPTVDIQPVGTPFEELPSEHPTPEPVTSPPVVTEVPEEPSQRATTIATTTATTTAT
TTGAPTVATVPTTVATAAPSIPAVPPSTATTAVVRTTGIRRLLPLPLTTAATAPATTPAV
ASPPTTAVILDTEAPTPRLVSTATSRPRALPRPATTQEPAVPERSTLPLPLGTTAPGPTE
VAQTPTPESFLTTTREEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAQPSPPP
GTLPKGARPGPGILDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLL
IYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccgcggggcggcccggctcccgggctccgagcgcccaccctgcggcggggcg
cggggcgctgggggccgggccgagccggggaccgcggccgcggggggcgctcgggcccgc
cccgccccgcgcccctcctcccgctccgcccgcgctgggggcggcccggcggcggcggca
gcggcggcggcggcggcggcggcgcacgcttcctgcgggcgcggccgctgtgggcgcgga
gctgcgaggcggagccgggccgccgagccggagccgcgagccgagccgcgcgtcgctcca
gccgccgggccgcgccgccgccgagcagccgccccgcgccgcgcctcgggaacaaaggcg
ccgccgcccgccgcccgcgccgccgccgccgccatgaagccggggccgccgcaccgtgcc
ggggccgcccacggggcaggcgccggggccggggccgcggccgggcccggggcccgcggg
ctgctcctgcccccgctgctgctgctgctgctggcggggcgcgccgcgggggcgcagcgc
tggcgcagtgagaacttcgagaggccagtggacctggagggctcgggggatgacgactcc
tttcccgacgacgaactggatgacctgtactcggggtcaggctcgggctacttcgagcag
gagtcgggccttgagacagccatgcggttcagcccggatatggccctagccgtgtccacc
acgcctgctgtgttgcccaccgtggacatccagcccgtgggcaccccgttcgaagagctg
ccctctgaacaccccaccccagagcctgtcaccagccccccagtggtgacagaggtcccg
gaagagcccagccagagagccaccaccattgccaccaccacggcgaccaccactgccacc
accacaggagccccgaccgtggccactgtgcccaccacagtggctactgccgcccccagc
atccctgcagtacccccttccacggccaccactgctgtcgtaaggaccaccggcatacgg
aggcttctgcccctccctctgaccacggctgccacagccccggccaccaccccagcggtg
gcctcgcctcccaccacagcggtcatcttggacaccgaggcccccacccccaggctggtc
agcaccgctacctccaggccaagagcccttccaaggccggcaaccacccaggaacctgct
gtccccgagaggagcaccctgcccctgcccctggggaccactgcccctggacccacagag
gtggctcagaccccgactccggagtccttcctgaccaccactcgggaggagccggaggtg
ccagtgagcgggggacccagtggggactttgagctgccagaagaagagaccacacagcca
gacacggccaatgaggtggtggctgtcgggggtgctgcagcccagccgtcacctcccccg
gggaccctgcccaagggtgcccgcccaggccccggcatcctggacaatgccattgactcg
ggcagctcggctgcgcagctgccacagaagagcatcttggagcggaaggaagtgctcgta
gctgtgattgtcggtggggtggtgggagccctcttcgcagccttcctggtcacgctgctc
atctaccggatgaaaaagaaggacgagggcagctacacgctggaggaacccaagcaggcg
agcgtcacctaccagaagcccgacaagcaggaggagttctatgcctag
DBGET
integrated database retrieval system