KEGG   Oryctolagus cuniculus (rabbit): 100340527
Entry
100340527         CDS       T03373                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04136  Autophagy - other
ocu04140  Autophagy - animal
ocu05010  Alzheimer disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05017  Spinocerebellar ataxia
ocu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100340527
   04136 Autophagy - other
    100340527
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100340527
   05014 Amyotrophic lateral sclerosis
    100340527
   05016 Huntington disease
    100340527
   05017 Spinocerebellar ataxia
    100340527
   05022 Pathways of neurodegeneration - multiple diseases
    100340527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100340527
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100340527
Membrane trafficking [BR:ocu04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100340527
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100340527
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_RSE1_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd BCAS3_WD40
Other DBs
NCBI-GeneID: 100340527
NCBI-ProteinID: XP_008269970
Ensembl: ENSOCUG00000017409
LinkDB
Position
19:complement(49837637..49870699)
AA seq 363 aa
MNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEESIYIHNIKDMKLLKTLLDIPANP
TGLCALSINHSNSYLAYPGSLTTGEIVLYDGNSLKTVCTIAAHEGTLAAITFNSSGSKLA
SASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLE
HLTNSRPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQDRAFATGRLNFSGQRNICTLST
IQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLLGSGTEENKENDLRPSLPQSYAA
TVARPSSSAASTVPGYSEDGGALRGEVIPEHEFATGPVCLEDENEFPPIILCRGSQKGKS
KQS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaacgtgtaccacttcaagaaaggcacggaaatctgtaactacagctactccagcaac
atcctgtccataaggctgaaccggcaaaggctgctggtttgcctggaggaatccatttac
attcacaacattaaagacatgaagctgctcaagaccctcctggatattcctgcaaaccca
acaggtctgtgtgccctctctatcaaccattccaattcctacttggcctatcccggaagc
ctgaccacaggcgagattgtgctttatgatggaaactccttgaaaactgtctgcaccatc
gctgcccacgaggggacgctggccgccatcaccttcaactcctccggctcgaaactcgca
agcgcgtctgaaaagggcacagtcatccgcgtgttctctgtacctgacgggcaaaagctc
tatgagtttcggagaggaatgaaaaggtatgtgacaatcagctctctcgtgttcagcatg
gactcgcagttcctctgtgcctccagcaacaccgagaccgtgcacatcttcaagctggaa
cacctcaccaacagccggccagaagagccttccacctggagcggctacatggggaagatg
ttcatggctgccaccaactacctccccgcccaggtgtcggacatgatgaaccaggacagg
gcttttgccaccggacgcttgaacttctcggggcagaggaacatctgcaccctctccacg
atccagaaactgccgaggctgctagttgcatcatccgatggacacctttatatctacaac
ctggaccctcaggatggaggagaatgcgtcctgatcaagacccacagcctgcttggctca
ggaacagaagagaataaagaaaatgacctcaggccttccttacctcagtcttatgcagcc
acggtagccagaccaagctcctccgcagcctccacggtgcccggttactcggaggacggc
ggggcgctccgaggcgaggttattccggagcacgagtttgccacgggacccgtgtgtctg
gaggacgagaatgaatttccccctataatcttgtgccgtggaagtcagaagggcaaatcg
aagcagtcgtga

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